RNA–Protein interactions for RNA: ENST00000580879.5

NUP85-215, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-215ENST00000580879 ZNF606Q8WXB4 792 aa13.93□□□□□ -0.18
NUP85-215ENST00000580879 KCTD13Q8WZ19 329 aa13.93□□□□□ -0.18
NUP85-215ENST00000580879 CLDN23Q96B33 292 aa13.93□□□□□ -0.18
NUP85-215ENST00000580879 MSANTD3Q96H12 275 aa13.93□□□□□ -0.18
NUP85-215ENST00000580879 PRRX2Q99811 253 aa13.93□□□□□ -0.18
NUP85-215ENST00000580879 SPATA6Q9NWH7 488 aaPredicted RBP13.93□□□□□ -0.18
NUP85-215ENST00000580879 RASAL2Q9UJF2 1139 aa13.93□□□□□ -0.18
NUP85-215ENST00000580879 DNMT3LQ9UJW3 386 aa13.93□□□□□ -0.18
NUP85-215ENST00000580879 MIA3Q5JRA6 1907 aa13.92□□□□□ -0.18
NUP85-215ENST00000580879 E2F8A0AVK6 867 aa13.92□□□□□ -0.18
NUP85-215ENST00000580879 YJEFN3A6XGL0 299 aa13.92□□□□□ -0.18
NUP85-215ENST00000580879 E7ENQ6 273 aa13.92□□□□□ -0.18
NUP85-215ENST00000580879 NCAM2O15394 837 aa13.92□□□□□ -0.18
NUP85-215ENST00000580879 MED7O43513 233 aa13.92□□□□□ -0.18
NUP85-215ENST00000580879 NFATC1O95644 943 aa13.92□□□□□ -0.18
NUP85-215ENST00000580879 CYP17A1P05093 508 aa13.92□□□□□ -0.18
NUP85-215ENST00000580879 TPM2P07951 284 aa13.92□□□□□ -0.18
NUP85-215ENST00000580879 HMBSP08397 361 aa13.92□□□□□ -0.18
NUP85-215ENST00000580879 CHRNB1P11230 501 aa13.92□□□□□ -0.18
NUP85-215ENST00000580879 ATP1A3P13637 1013 aa13.92□□□□□ -0.18
NUP85-215ENST00000580879 ZNF18P17022 549 aa13.92□□□□□ -0.18
NUP85-215ENST00000580879 CDK11BP21127 795 aaKnown RBP13.92□□□□□ -0.18
NUP85-215ENST00000580879 GPD2P43304 727 aa13.92□□□□□ -0.18
NUP85-215ENST00000580879 PSEN1P49768 467 aa13.92□□□□□ -0.18
NUP85-215ENST00000580879 NUBP1P53384 320 aa13.92□□□□□ -0.18
NUP85-215ENST00000580879 DRAP1Q14919 205 aaPredicted RBP13.92□□□□□ -0.18
NUP85-215ENST00000580879 RSRC2Q7L4I2 434 aaKnown RBP13.92□□□□□ -0.18
NUP85-215ENST00000580879 PASD1Q8IV76 773 aa13.92□□□□□ -0.18
NUP85-215ENST00000580879 BBS7Q8IWZ6 715 aa13.92□□□□□ -0.18
NUP85-215ENST00000580879 ARHGAP18Q8N392 663 aa13.92□□□□□ -0.18
NUP85-215ENST00000580879 EDEM1Q92611 657 aa13.92□□□□□ -0.18
NUP85-215ENST00000580879 MIS12Q9H081 205 aa13.92□□□□□ -0.18
NUP85-215ENST00000580879 NAT10Q9H0A0 1025 aaKnown RBP13.92□□□□□ -0.18
NUP85-215ENST00000580879 FBRSL1Q9HCM7 1045 aaKnown RBP13.92□□□□□ -0.18
NUP85-215ENST00000580879 ST7Q9NRC1 585 aa13.92□□□□□ -0.18
NUP85-215ENST00000580879 CLIC5Q9NZA1 410 aa13.92□□□□□ -0.18
NUP85-215ENST00000580879 LIMA1Q9UHB6 759 aaKnown RBP13.92□□□□□ -0.18
NUP85-215ENST00000580879 CYTH4Q9UIA0 394 aa13.92□□□□□ -0.18
NUP85-215ENST00000580879 FAM170AA1A519 330 aa13.91□□□□□ -0.18
NUP85-215ENST00000580879 SLC9A3R1O14745 358 aaPredicted RBP13.91□□□□□ -0.18
NUP85-215ENST00000580879 GREM1O60565 184 aa13.91□□□□□ -0.18
NUP85-215ENST00000580879 UCHL3P15374 230 aa13.91□□□□□ -0.18
NUP85-215ENST00000580879 CLCN1P35523 988 aa13.91□□□□□ -0.18
NUP85-215ENST00000580879 GALK1P51570 392 aa13.91□□□□□ -0.18
NUP85-215ENST00000580879 DAOAP59103 153 aa13.91□□□□□ -0.18
NUP85-215ENST00000580879 NHLH1Q02575 133 aa13.91□□□□□ -0.18
NUP85-215ENST00000580879 MTAPQ13126 283 aa13.91□□□□□ -0.18
NUP85-215ENST00000580879 NR1H3Q13133 447 aa13.91□□□□□ -0.18
NUP85-215ENST00000580879 DHCR24Q15392 516 aa13.91□□□□□ -0.18
NUP85-215ENST00000580879 GAB4Q2WGN9 574 aa13.91□□□□□ -0.18
NUP85-215ENST00000580879 FKBP15Q5T1M5 1219 aa13.91□□□□□ -0.18
NUP85-215ENST00000580879 BSPRYQ5W0U4 402 aa13.91□□□□□ -0.18
NUP85-215ENST00000580879 BTBD8Q5XKL5 378 aa13.91□□□□□ -0.18
NUP85-215ENST00000580879 FSTL4Q6MZW2 842 aa13.91□□□□□ -0.18
NUP85-215ENST00000580879 KLHDC10Q6PID8 442 aa13.91□□□□□ -0.18
NUP85-215ENST00000580879 C1orf228Q6PIY5 440 aa13.91□□□□□ -0.18
NUP85-215ENST00000580879 RHBDF2Q6PJF5 856 aa13.91□□□□□ -0.18
NUP85-215ENST00000580879 Q6ZS52 159 aa13.91□□□□□ -0.18
NUP85-215ENST00000580879 TADA2BQ86TJ2 420 aa13.91□□□□□ -0.18
NUP85-215ENST00000580879 SLC47A2Q86VL8 602 aa13.91□□□□□ -0.18
NUP85-215ENST00000580879 C1orf210Q8IVY1 113 aa13.91□□□□□ -0.18
NUP85-215ENST00000580879 DHX40Q8IX18 779 aaKnown RBP13.91□□□□□ -0.18
NUP85-215ENST00000580879 ADGRG2Q8IZP9 1017 aa13.91□□□□□ -0.18
NUP85-215ENST00000580879 ANKRD20A12PQ8NF67 263 aa13.91□□□□□ -0.18
NUP85-215ENST00000580879 ATOH1Q92858 354 aaPredicted RBP13.91□□□□□ -0.18
NUP85-215ENST00000580879 HSFY1Q96LI6 401 aa13.91□□□□□ -0.18
NUP85-215ENST00000580879 PHOX2BQ99453 314 aa13.91□□□□□ -0.18
NUP85-215ENST00000580879 FUCA2Q9BTY2 467 aa13.91□□□□□ -0.18
NUP85-215ENST00000580879 NAA15Q9BXJ9 866 aaKnown RBP13.91□□□□□ -0.18
NUP85-215ENST00000580879 GANQ9H2C0 597 aa13.91□□□□□ -0.18
NUP85-215ENST00000580879 CNGB3Q9NQW8 809 aa13.91□□□□□ -0.18
NUP85-215ENST00000580879 FAM207AQ9NSI2 230 aaPredicted RBP13.91□□□□□ -0.18
NUP85-215ENST00000580879 ARIH1Q9Y4X5 557 aaPredicted RBP13.91□□□□□ -0.18
NUP85-215ENST00000580879 CACNA1IQ9P0X4 2223 aa13.91□□□□□ -0.18
NUP85-215ENST00000580879 SLC12A8A0AV02 714 aa13.9□□□□□ -0.18
NUP85-215ENST00000580879 LGALS16A8MUM7 142 aa13.9□□□□□ -0.18
NUP85-215ENST00000580879 TRDMT1O14717 391 aaKnown RBP13.9□□□□□ -0.18
NUP85-215ENST00000580879 EPHB6O15197 1021 aa13.9□□□□□ -0.18
NUP85-215ENST00000580879 EGFP01133 1207 aa13.9□□□□□ -0.18
NUP85-215ENST00000580879 RPS9P46781 194 aaKnown RBP13.9□□□□□ -0.18
NUP85-215ENST00000580879 ZNF165P49910 485 aa13.9□□□□□ -0.18
NUP85-215ENST00000580879 PTK2Q05397 1052 aa13.9□□□□□ -0.18
NUP85-215ENST00000580879 GOLGA8FQ08AF8 430 aa13.9□□□□□ -0.18
NUP85-215ENST00000580879 GOLGA8DPQ0D2H9 430 aa13.9□□□□□ -0.18
NUP85-215ENST00000580879 LRRC32Q14392 662 aa13.9□□□□□ -0.18
NUP85-215ENST00000580879 GAS6Q14393 721 aa13.9□□□□□ -0.18
NUP85-215ENST00000580879 SYCP1Q15431 976 aa13.9□□□□□ -0.18
NUP85-215ENST00000580879 TMEM196Q5HYL7 178 aa13.9□□□□□ -0.18
NUP85-215ENST00000580879 LY6G5CQ5SRR4 150 aa13.9□□□□□ -0.18
NUP85-215ENST00000580879 APTXQ7Z2E3 356 aaKnown RBP13.9□□□□□ -0.18
NUP85-215ENST00000580879 SCUBE3Q8IX30 993 aa13.9□□□□□ -0.18
NUP85-215ENST00000580879 FAM71AQ8IYT1 594 aa13.9□□□□□ -0.18
NUP85-215ENST00000580879 MAML2Q8IZL2 1156 aaPredicted RBP13.9□□□□□ -0.18
NUP85-215ENST00000580879 FAM122AQ96E09 287 aa13.9□□□□□ -0.18
NUP85-215ENST00000580879 PCMTD1Q96MG8 357 aaPredicted RBP13.9□□□□□ -0.18
NUP85-215ENST00000580879 CDK5RAP1Q96SZ6 601 aaKnown RBP13.9□□□□□ -0.18
NUP85-215ENST00000580879 P2RY13Q9BPV8 354 aa13.9□□□□□ -0.18
NUP85-215ENST00000580879 BPIFA3Q9BQP9 254 aa13.9□□□□□ -0.18
NUP85-215ENST00000580879 CHRDQ9H2X0 955 aa13.9□□□□□ -0.18
NUP85-215ENST00000580879 PLCB1Q9NQ66 1216 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms