RNA–Protein interactions for RNA: ENST00000580713.1

TOP3A-210, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-210ENST00000580713 CER1O95813 267 aa11.42□□□□□ -0.58
TOP3A-210ENST00000580713 PLA2G4BP0C869 781 aa11.42□□□□□ -0.58
TOP3A-210ENST00000580713 MBL2P11226 248 aaPredicted RBP11.42□□□□□ -0.58
TOP3A-210ENST00000580713 ANXA13P27216 316 aa11.42□□□□□ -0.58
TOP3A-210ENST00000580713 ITPKBP27987 946 aa11.42□□□□□ -0.58
TOP3A-210ENST00000580713 PCSK1P29120 753 aa11.42□□□□□ -0.58
TOP3A-210ENST00000580713 POLR2BP30876 1174 aaKnown RBP11.42□□□□□ -0.58
TOP3A-210ENST00000580713 STAT6P42226 847 aa11.42□□□□□ -0.58
TOP3A-210ENST00000580713 MATKP42679 507 aa11.42□□□□□ -0.58
TOP3A-210ENST00000580713 TFAMQ00059 246 aaKnown RBP11.42□□□□□ -0.58
TOP3A-210ENST00000580713 CAMK4Q16566 473 aa11.42□□□□□ -0.58
TOP3A-210ENST00000580713 CFAP221Q4G0U5 840 aa11.42□□□□□ -0.58
TOP3A-210ENST00000580713 RRAGBQ5VZM2 374 aa11.42□□□□□ -0.58
TOP3A-210ENST00000580713 SLC39A4Q6P5W5 647 aa11.42□□□□□ -0.58
TOP3A-210ENST00000580713 KRBA2Q6ZNG9 492 aa11.42□□□□□ -0.58
TOP3A-210ENST00000580713 C4orf50Q6ZRC1 276 aa11.42□□□□□ -0.58
TOP3A-210ENST00000580713 DENND5BQ6ZUT9 1274 aa11.42□□□□□ -0.58
TOP3A-210ENST00000580713 DDX42Q86XP3 938 aaKnown RBP eCLIP11.42□□□□□ -0.58
TOP3A-210ENST00000580713 CEP57L1Q8IYX8 460 aa11.42□□□□□ -0.58
TOP3A-210ENST00000580713 CHPFQ8IZ52 775 aa11.42□□□□□ -0.58
TOP3A-210ENST00000580713 TMEM86AQ8N2M4 240 aa11.42□□□□□ -0.58
TOP3A-210ENST00000580713 ZCCHC9Q8N567 271 aaKnown RBP11.42□□□□□ -0.58
TOP3A-210ENST00000580713 KIAA1958Q8N8K9 716 aa11.42□□□□□ -0.58
TOP3A-210ENST00000580713 IQUBQ8NA54 791 aa11.42□□□□□ -0.58
TOP3A-210ENST00000580713 IPO4Q8TEX9 1081 aaKnown RBP11.42□□□□□ -0.58
TOP3A-210ENST00000580713 CCDC34Q96HJ3 373 aa11.42□□□□□ -0.58
TOP3A-210ENST00000580713 FUBP3Q96I24 572 aaKnown RBP eCLIP11.42□□□□□ -0.58
TOP3A-210ENST00000580713 MMTAG2Q9BU76 263 aaKnown RBP11.42□□□□□ -0.58
TOP3A-210ENST00000580713 SLC6A17Q9H1V8 727 aa11.42□□□□□ -0.58
TOP3A-210ENST00000580713 ZHX3Q9H4I2 956 aa11.42□□□□□ -0.58
TOP3A-210ENST00000580713 KCND2Q9NZV8 630 aa11.42□□□□□ -0.58
TOP3A-210ENST00000580713 TBC1D14Q9P2M4 693 aa11.42□□□□□ -0.58
TOP3A-210ENST00000580713 SERTAD1Q9UHV2 236 aa11.42□□□□□ -0.58
TOP3A-210ENST00000580713 AGO2Q9UKV8 859 aaKnown RBP11.42□□□□□ -0.58
TOP3A-210ENST00000580713 ANAPC1Q9H1A4 1944 aa11.42□□□□□ -0.58
TOP3A-210ENST00000580713 A0A1W2PQF6 199 aa11.41□□□□□ -0.58
TOP3A-210ENST00000580713 ZNF840PA6NDX5 716 aa11.41□□□□□ -0.58
TOP3A-210ENST00000580713 ANKRD63C9JTQ0 380 aa11.41□□□□□ -0.58
TOP3A-210ENST00000580713 J3QKU1 62 aa11.41□□□□□ -0.58
TOP3A-210ENST00000580713 MAP3K7O43318 606 aa11.41□□□□□ -0.58
TOP3A-210ENST00000580713 HCRTO43612 131 aa11.41□□□□□ -0.58
TOP3A-210ENST00000580713 ACTN4O43707 911 aaKnown RBP11.41□□□□□ -0.58
TOP3A-210ENST00000580713 ATP2C2O75185 946 aa11.41□□□□□ -0.58
TOP3A-210ENST00000580713 TULP3O75386 442 aa11.41□□□□□ -0.58
TOP3A-210ENST00000580713 ITGB3P05106 788 aa11.41□□□□□ -0.58
TOP3A-210ENST00000580713 BDNFP23560 247 aa11.41□□□□□ -0.58
TOP3A-210ENST00000580713 MAGEA11P43364 429 aa11.41□□□□□ -0.58
TOP3A-210ENST00000580713 LHX1P48742 406 aa11.41□□□□□ -0.58
TOP3A-210ENST00000580713 SLC12A3P55017 1021 aa11.41□□□□□ -0.58
TOP3A-210ENST00000580713 USP46P62068 366 aa11.41□□□□□ -0.58
TOP3A-210ENST00000580713 ANO4Q32M45 955 aa11.41□□□□□ -0.58
TOP3A-210ENST00000580713 ZSCAN23Q3MJ62 389 aa11.41□□□□□ -0.58
TOP3A-210ENST00000580713 EGFLAMQ63HQ2 1017 aa11.41□□□□□ -0.58
TOP3A-210ENST00000580713 OSTM1Q86WC4 334 aa11.41□□□□□ -0.58
TOP3A-210ENST00000580713 MIB1Q86YT6 1006 aa11.41□□□□□ -0.58
TOP3A-210ENST00000580713 ADGRF2Q8IZF7 708 aa11.41□□□□□ -0.58
TOP3A-210ENST00000580713 PHTF2Q8N3S3 785 aa11.41□□□□□ -0.58
TOP3A-210ENST00000580713 ZNF843Q8N446 348 aa11.41□□□□□ -0.58
TOP3A-210ENST00000580713 SPATA17Q96L03 361 aa11.41□□□□□ -0.58
TOP3A-210ENST00000580713 ACOX2Q99424 681 aa11.41□□□□□ -0.58
TOP3A-210ENST00000580713 PKMYT1Q99640 499 aa11.41□□□□□ -0.58
TOP3A-210ENST00000580713 CD93Q9NPY3 652 aa11.41□□□□□ -0.58
TOP3A-210ENST00000580713 TOR4AQ9NXH8 423 aa11.41□□□□□ -0.58
TOP3A-210ENST00000580713 EHD2Q9NZN4 543 aa11.41□□□□□ -0.58
TOP3A-210ENST00000580713 HOOK1Q9UJC3 728 aaKnown RBP11.41□□□□□ -0.58
TOP3A-210ENST00000580713 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.41□□□□□ -0.58
TOP3A-210ENST00000580713 FNDC3AQ9Y2H6 1198 aaKnown RBP11.41□□□□□ -0.58
TOP3A-210ENST00000580713 SNX9Q9Y5X1 595 aa11.41□□□□□ -0.58
TOP3A-210ENST00000580713 KALRNO60229 2985 aa11.41□□□□□ -0.58
TOP3A-210ENST00000580713 ZNF462Q96JM2 2506 aa11.41□□□□□ -0.58
TOP3A-210ENST00000580713 HELZP42694 1942 aaKnown RBP11.41□□□□□ -0.58
TOP3A-210ENST00000580713 TISP43B9A030 160 aa11.4□□□□□ -0.58
TOP3A-210ENST00000580713 TRIM24O15164 1050 aa11.4□□□□□ -0.58
TOP3A-210ENST00000580713 FLRT2O43155 660 aa11.4□□□□□ -0.58
TOP3A-210ENST00000580713 IL18RAPO95256 599 aa11.4□□□□□ -0.58
TOP3A-210ENST00000580713 KRT19P08727 400 aa11.4□□□□□ -0.58
TOP3A-210ENST00000580713 SLFN14P0C7P3 912 aa11.4□□□□□ -0.58
TOP3A-210ENST00000580713 ZNF883P0CG24 379 aa11.4□□□□□ -0.58
TOP3A-210ENST00000580713 HLA-EP13747 358 aa11.4□□□□□ -0.58
TOP3A-210ENST00000580713 PLCG1P19174 1290 aa11.4□□□□□ -0.58
TOP3A-210ENST00000580713 SCP2P22307 547 aa11.4□□□□□ -0.58
TOP3A-210ENST00000580713 CD6P30203 668 aa11.4□□□□□ -0.58
TOP3A-210ENST00000580713 PPP3CCP48454 512 aa11.4□□□□□ -0.58
TOP3A-210ENST00000580713 PSMC1P62191 440 aaKnown RBP11.4□□□□□ -0.58
TOP3A-210ENST00000580713 CYP27A1Q02318 531 aa11.4□□□□□ -0.58
TOP3A-210ENST00000580713 IFRD2Q12894 506 aaPredicted RBP11.4□□□□□ -0.58
TOP3A-210ENST00000580713 DHX8Q14562 1220 aaKnown RBP11.4□□□□□ -0.58
TOP3A-210ENST00000580713 SUZ12Q15022 739 aaKnown RBP11.4□□□□□ -0.58
TOP3A-210ENST00000580713 HLA-BQ31612 363 aa11.4□□□□□ -0.58
TOP3A-210ENST00000580713 TMEM119Q4V9L6 283 aa11.4□□□□□ -0.58
TOP3A-210ENST00000580713 ARSHQ5FYA8 562 aa11.4□□□□□ -0.58
TOP3A-210ENST00000580713 HYIQ5T013 277 aa11.4□□□□□ -0.58
TOP3A-210ENST00000580713 GRAMD4Q6IC98 578 aa11.4□□□□□ -0.58
TOP3A-210ENST00000580713 SLFN12LQ6IEE8 588 aa11.4□□□□□ -0.58
TOP3A-210ENST00000580713 IL27RAQ6UWB1 636 aa11.4□□□□□ -0.58
TOP3A-210ENST00000580713 VSTM1Q6UX27 236 aa11.4□□□□□ -0.58
TOP3A-210ENST00000580713 GPBP1Q86WP2 473 aa11.4□□□□□ -0.58
TOP3A-210ENST00000580713 ETFBKMTQ8IXQ9 262 aa11.4□□□□□ -0.58
TOP3A-210ENST00000580713 ELOA2Q8IYF1 753 aaPredicted RBP11.4□□□□□ -0.58
TOP3A-210ENST00000580713 CSGALNACT2Q8N6G5 542 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms