RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 ACADVLP49748 655 aa8.21□□□□□ -1.1
SMARCE1-217ENST00000580654 TAF6P49848 677 aa8.21□□□□□ -1.1
SMARCE1-217ENST00000580654 SMCPP49901 116 aaPredicted RBP8.21□□□□□ -1.1
SMARCE1-217ENST00000580654 IL9RQ01113 521 aa8.21□□□□□ -1.1
SMARCE1-217ENST00000580654 TSPY1Q01534 308 aa8.21□□□□□ -1.1
SMARCE1-217ENST00000580654 STRN3Q13033 797 aa8.21□□□□□ -1.1
SMARCE1-217ENST00000580654 CFAP221Q4G0U5 840 aa8.21□□□□□ -1.1
SMARCE1-217ENST00000580654 INTS6LQ5JSJ4 861 aaKnown RBP8.21□□□□□ -1.1
SMARCE1-217ENST00000580654 RINT1Q6NUQ1 792 aa8.21□□□□□ -1.1
SMARCE1-217ENST00000580654 LAYNQ6UX15 382 aa8.21□□□□□ -1.1
SMARCE1-217ENST00000580654 C1orf186Q6ZWK4 172 aa8.21□□□□□ -1.1
SMARCE1-217ENST00000580654 PRICKLE2Q7Z3G6 844 aa8.21□□□□□ -1.1
SMARCE1-217ENST00000580654 OSTM1Q86WC4 334 aa8.21□□□□□ -1.1
SMARCE1-217ENST00000580654 CHPFQ8IZ52 775 aa8.21□□□□□ -1.1
SMARCE1-217ENST00000580654 SNRNP27Q8WVK2 155 aaKnown RBP8.21□□□□□ -1.1
SMARCE1-217ENST00000580654 TSC1Q92574 1164 aa8.21□□□□□ -1.1
SMARCE1-217ENST00000580654 WBP2Q969T9 261 aa8.21□□□□□ -1.1
SMARCE1-217ENST00000580654 NAF1Q96HR8 494 aaKnown RBP8.21□□□□□ -1.1
SMARCE1-217ENST00000580654 TSPAN18Q96SJ8 248 aa8.21□□□□□ -1.1
SMARCE1-217ENST00000580654 TRIM9Q9C026 710 aa8.21□□□□□ -1.1
SMARCE1-217ENST00000580654 MKRN2Q9H000 416 aaKnown RBP8.21□□□□□ -1.1
SMARCE1-217ENST00000580654 RPF1Q9H9Y2 349 aaKnown RBP8.21□□□□□ -1.1
SMARCE1-217ENST00000580654 ITM2CQ9NQX7 267 aa8.21□□□□□ -1.1
SMARCE1-217ENST00000580654 DDX19AQ9NUU7 478 aaKnown RBP8.21□□□□□ -1.1
SMARCE1-217ENST00000580654 ANKMY1Q9P2S6 941 aa8.21□□□□□ -1.1
SMARCE1-217ENST00000580654 DEC1Q9P2X7 70 aa8.21□□□□□ -1.1
SMARCE1-217ENST00000580654 FTSJ1Q9UET6 329 aa8.21□□□□□ -1.1
SMARCE1-217ENST00000580654 CPSF3Q9UKF6 684 aaKnown RBP8.21□□□□□ -1.1
SMARCE1-217ENST00000580654 KIAA1024Q9UPX6 916 aa8.21□□□□□ -1.1
SMARCE1-217ENST00000580654 BOD1L1Q8NFC6 3051 aa8.21□□□□□ -1.1
SMARCE1-217ENST00000580654 NUMA1Q14980 2115 aa8.21□□□□□ -1.1
SMARCE1-217ENST00000580654 BSNQ9UPA5 3926 aa8.21□□□□□ -1.1
SMARCE1-217ENST00000580654 E2F8A0AVK6 867 aa8.2□□□□□ -1.1
SMARCE1-217ENST00000580654 KPNA7A9QM74 516 aa8.2□□□□□ -1.1
SMARCE1-217ENST00000580654 ENC1O14682 589 aa8.2□□□□□ -1.1
SMARCE1-217ENST00000580654 OGTO15294 1046 aa8.2□□□□□ -1.1
SMARCE1-217ENST00000580654 RFPL3O75679 317 aa8.2□□□□□ -1.1
SMARCE1-217ENST00000580654 ADH1BP00325 375 aa8.2□□□□□ -1.1
SMARCE1-217ENST00000580654 FDPSP14324 419 aaKnown RBP8.2□□□□□ -1.1
SMARCE1-217ENST00000580654 XBP1P17861 261 aa8.2□□□□□ -1.1
SMARCE1-217ENST00000580654 CDC25AP30304 524 aa8.2□□□□□ -1.1
SMARCE1-217ENST00000580654 MCM7P33993 719 aa8.2□□□□□ -1.1
SMARCE1-217ENST00000580654 ACTN2P35609 894 aa8.2□□□□□ -1.1
SMARCE1-217ENST00000580654 GRIK1P39086 918 aa8.2□□□□□ -1.1
SMARCE1-217ENST00000580654 CCT6AP40227 531 aaKnown RBP8.2□□□□□ -1.1
SMARCE1-217ENST00000580654 MATR3P43243 847 aaKnown RBP eCLIP8.2□□□□□ -1.1
SMARCE1-217ENST00000580654 CCT8P50990 548 aa8.2□□□□□ -1.1
SMARCE1-217ENST00000580654 PDE6CP51160 858 aa8.2□□□□□ -1.1
SMARCE1-217ENST00000580654 TPMTP51580 245 aa8.2□□□□□ -1.1
SMARCE1-217ENST00000580654 TMPRSS3P57727 454 aa8.2□□□□□ -1.1
SMARCE1-217ENST00000580654 TMEM132DQ14C87 1099 aa8.2□□□□□ -1.1
SMARCE1-217ENST00000580654 FUT11Q495W5 492 aa8.2□□□□□ -1.1
SMARCE1-217ENST00000580654 DIEXFQ68CQ4 756 aaKnown RBP8.2□□□□□ -1.1
SMARCE1-217ENST00000580654 CPLX2Q6PUV4 134 aaKnown RBP8.2□□□□□ -1.1
SMARCE1-217ENST00000580654 RUFY3Q7L099 469 aa8.2□□□□□ -1.1
SMARCE1-217ENST00000580654 KCNK18Q7Z418 384 aa8.2□□□□□ -1.1
SMARCE1-217ENST00000580654 TMEM25Q86YD3 366 aa8.2□□□□□ -1.1
SMARCE1-217ENST00000580654 SCN4BQ8IWT1 228 aa8.2□□□□□ -1.1
SMARCE1-217ENST00000580654 PDCL2Q8N4E4 241 aa8.2□□□□□ -1.1
SMARCE1-217ENST00000580654 ERMNQ8TAM6 284 aa8.2□□□□□ -1.1
SMARCE1-217ENST00000580654 SPIRE2Q8WWL2 714 aa8.2□□□□□ -1.1
SMARCE1-217ENST00000580654 IGSF8Q969P0 613 aa8.2□□□□□ -1.1
SMARCE1-217ENST00000580654 HIC2Q96JB3 615 aa8.2□□□□□ -1.1
SMARCE1-217ENST00000580654 DRC1Q96MC2 740 aa8.2□□□□□ -1.1
SMARCE1-217ENST00000580654 LGMNQ99538 433 aa8.2□□□□□ -1.1
SMARCE1-217ENST00000580654 ACBD6Q9BR61 282 aa8.2□□□□□ -1.1
SMARCE1-217ENST00000580654 C17orf75Q9HAS0 396 aa8.2□□□□□ -1.1
SMARCE1-217ENST00000580654 DDX43Q9NXZ2 648 aaKnown RBP8.2□□□□□ -1.1
SMARCE1-217ENST00000580654 TRPM5Q9NZQ8 1165 aa8.2□□□□□ -1.1
SMARCE1-217ENST00000580654 L1RE1Q9UN81 338 aa8.2□□□□□ -1.1
SMARCE1-217ENST00000580654 ANKRD6Q9Y2G4 727 aa8.2□□□□□ -1.1
SMARCE1-217ENST00000580654 DERAQ9Y315 318 aa8.2□□□□□ -1.1
SMARCE1-217ENST00000580654 FBN2P35556 2912 aa8.19□□□□□ -1.1
SMARCE1-217ENST00000580654 AHCTF1Q8WYP5 2266 aa8.19□□□□□ -1.1
SMARCE1-217ENST00000580654 ENO4A6NNW6 628 aa8.19□□□□□ -1.1
SMARCE1-217ENST00000580654 ZBTB24O43167 697 aaPredicted RBP8.19□□□□□ -1.1
SMARCE1-217ENST00000580654 IGLV3-19P01714 112 aa8.19□□□□□ -1.1
SMARCE1-217ENST00000580654 GP1BBP13224 206 aa8.19□□□□□ -1.1
SMARCE1-217ENST00000580654 CTSKP43235 329 aa8.19□□□□□ -1.1
SMARCE1-217ENST00000580654 MAGEA11P43364 429 aa8.19□□□□□ -1.1
SMARCE1-217ENST00000580654 AFF3P51826 1226 aaKnown RBP8.19□□□□□ -1.1
SMARCE1-217ENST00000580654 KIAA1614Q5VZ46 1190 aa8.19□□□□□ -1.1
SMARCE1-217ENST00000580654 SDE2Q6IQ49 451 aa8.19□□□□□ -1.1
SMARCE1-217ENST00000580654 SLC39A4Q6P5W5 647 aa8.19□□□□□ -1.1
SMARCE1-217ENST00000580654 SKAP1Q86WV1 359 aa8.19□□□□□ -1.1
SMARCE1-217ENST00000580654 GATAD2AQ86YP4 633 aa8.19□□□□□ -1.1
SMARCE1-217ENST00000580654 BBS7Q8IWZ6 715 aa8.19□□□□□ -1.1
SMARCE1-217ENST00000580654 CD302Q8IX05 232 aa8.19□□□□□ -1.1
SMARCE1-217ENST00000580654 ZNF248Q8NDW4 579 aa8.19□□□□□ -1.1
SMARCE1-217ENST00000580654 FUBP3Q96I24 572 aaKnown RBP eCLIP8.19□□□□□ -1.1
SMARCE1-217ENST00000580654 CNDP2Q96KP4 475 aaKnown RBP8.19□□□□□ -1.1
SMARCE1-217ENST00000580654 SPATA17Q96L03 361 aa8.19□□□□□ -1.1
SMARCE1-217ENST00000580654 ORAI3Q9BRQ5 295 aa8.19□□□□□ -1.1
SMARCE1-217ENST00000580654 TTLL2Q9BWV7 592 aa8.19□□□□□ -1.1
SMARCE1-217ENST00000580654 C6orf106Q9H6K1 298 aaPredicted RBP8.19□□□□□ -1.1
SMARCE1-217ENST00000580654 TM9SF3Q9HD45 589 aa8.19□□□□□ -1.1
SMARCE1-217ENST00000580654 SPHK2Q9NRA0 654 aa8.19□□□□□ -1.1
SMARCE1-217ENST00000580654 DPP3Q9NY33 737 aa8.19□□□□□ -1.1
SMARCE1-217ENST00000580654 TBC1D14Q9P2M4 693 aa8.19□□□□□ -1.1
SMARCE1-217ENST00000580654 LRWD1Q9UFC0 647 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms