RNA–Protein interactions for RNA: ENST00000580533.1

SNORD3C-201, Transcript of small nucleolar RNA, C/D box 3C, humanhuman

BASIC

Gene SNORD3C, Length 581 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3C-201ENST00000580533 AVPR1AP37288 418 aa12.3□□□□□ -0.44
SNORD3C-201ENST00000580533 USP46P62068 366 aa12.3□□□□□ -0.44
SNORD3C-201ENST00000580533 PTP4A2Q12974 167 aa12.3□□□□□ -0.44
SNORD3C-201ENST00000580533 SMAD4Q13485 552 aaKnown RBP12.3□□□□□ -0.44
SNORD3C-201ENST00000580533 CCDC85BQ15834 202 aaPredicted RBP12.3□□□□□ -0.44
SNORD3C-201ENST00000580533 BSPRYQ5W0U4 402 aa12.3□□□□□ -0.44
SNORD3C-201ENST00000580533 PLEKHA7Q6IQ23 1121 aa12.3□□□□□ -0.44
SNORD3C-201ENST00000580533 SYCE2Q6PIF2 218 aa12.3□□□□□ -0.44
SNORD3C-201ENST00000580533 DDX42Q86XP3 938 aaKnown RBP eCLIP12.3□□□□□ -0.44
SNORD3C-201ENST00000580533 TMC8Q8IU68 726 aa12.3□□□□□ -0.44
SNORD3C-201ENST00000580533 C12orf76Q8N812 135 aaPredicted RBP12.3□□□□□ -0.44
SNORD3C-201ENST00000580533 SMRP1Q8NCR6 262 aa12.3□□□□□ -0.44
SNORD3C-201ENST00000580533 OLIG1Q8TAK6 271 aa12.3□□□□□ -0.44
SNORD3C-201ENST00000580533 MSLNLQ96KJ4 702 aa12.3□□□□□ -0.44
SNORD3C-201ENST00000580533 SERPINB11Q96P15 392 aa12.3□□□□□ -0.44
SNORD3C-201ENST00000580533 THAP2Q9H0W7 228 aa12.3□□□□□ -0.44
SNORD3C-201ENST00000580533 SLITRK6Q9H5Y7 841 aa12.3□□□□□ -0.44
SNORD3C-201ENST00000580533 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.3□□□□□ -0.44
SNORD3C-201ENST00000580533 GDE1Q9NZC3 331 aa12.3□□□□□ -0.44
SNORD3C-201ENST00000580533 CLEC1BQ9P126 229 aa12.3□□□□□ -0.44
SNORD3C-201ENST00000580533 DNMT3BQ9UBC3 853 aaKnown RBP12.3□□□□□ -0.44
SNORD3C-201ENST00000580533 MYO1AQ9UBC5 1043 aa12.3□□□□□ -0.44
SNORD3C-201ENST00000580533 TRANK1O15050 2925 aa12.29□□□□□ -0.44
SNORD3C-201ENST00000580533 CHD7Q9P2D1 2997 aa12.29□□□□□ -0.44
SNORD3C-201ENST00000580533 A0A1W2PQH9 124 aa12.29□□□□□ -0.44
SNORD3C-201ENST00000580533 YJEFN3A6XGL0 299 aa12.29□□□□□ -0.44
SNORD3C-201ENST00000580533 E7ENQ6 273 aa12.29□□□□□ -0.44
SNORD3C-201ENST00000580533 MYO1FO00160 1098 aa12.29□□□□□ -0.44
SNORD3C-201ENST00000580533 DYNC1I1O14576 645 aa12.29□□□□□ -0.44
SNORD3C-201ENST00000580533 TLR5O60602 858 aa12.29□□□□□ -0.44
SNORD3C-201ENST00000580533 F9P00740 461 aa12.29□□□□□ -0.44
SNORD3C-201ENST00000580533 F11P03951 625 aa12.29□□□□□ -0.44
SNORD3C-201ENST00000580533 SLC2A3P11169 496 aa12.29□□□□□ -0.44
SNORD3C-201ENST00000580533 RARGP13631 454 aa12.29□□□□□ -0.44
SNORD3C-201ENST00000580533 GPD1P21695 349 aa12.29□□□□□ -0.44
SNORD3C-201ENST00000580533 KCNA5P22460 613 aa12.29□□□□□ -0.44
SNORD3C-201ENST00000580533 ARHGAP25P42331 645 aa12.29□□□□□ -0.44
SNORD3C-201ENST00000580533 MATKP42679 507 aa12.29□□□□□ -0.44
SNORD3C-201ENST00000580533 NAP1L1P55209 391 aaKnown RBP12.29□□□□□ -0.44
SNORD3C-201ENST00000580533 RBM10P98175 930 aaKnown RBP12.29□□□□□ -0.44
SNORD3C-201ENST00000580533 NNTQ13423 1086 aa12.29□□□□□ -0.44
SNORD3C-201ENST00000580533 MAMLD1Q13495 774 aa12.29□□□□□ -0.44
SNORD3C-201ENST00000580533 ACAP1Q15027 740 aa12.29□□□□□ -0.44
SNORD3C-201ENST00000580533 ARHGAP29Q52LW3 1261 aa12.29□□□□□ -0.44
SNORD3C-201ENST00000580533 DCAF6Q58WW2 860 aa12.29□□□□□ -0.44
SNORD3C-201ENST00000580533 C10orf120Q5SQS8 335 aa12.29□□□□□ -0.44
SNORD3C-201ENST00000580533 MYRIPQ8NFW9 859 aa12.29□□□□□ -0.44
SNORD3C-201ENST00000580533 MAFAQ8NHW3 353 aaPredicted RBP12.29□□□□□ -0.44
SNORD3C-201ENST00000580533 FEZF2Q8TBJ5 459 aa12.29□□□□□ -0.44
SNORD3C-201ENST00000580533 ZNF564Q8TBZ8 553 aaPredicted RBP12.29□□□□□ -0.44
SNORD3C-201ENST00000580533 FNIP1Q8TF40 1166 aa12.29□□□□□ -0.44
SNORD3C-201ENST00000580533 UBE2Q2Q8WVN8 375 aa12.29□□□□□ -0.44
SNORD3C-201ENST00000580533 PPM1EQ8WY54 764 aa12.29□□□□□ -0.44
SNORD3C-201ENST00000580533 E2F7Q96AV8 911 aa12.29□□□□□ -0.44
SNORD3C-201ENST00000580533 ACSF2Q96CM8 615 aaPredicted RBP12.29□□□□□ -0.44
SNORD3C-201ENST00000580533 MCEEQ96PE7 176 aa12.29□□□□□ -0.44
SNORD3C-201ENST00000580533 SLC2A13Q96QE2 648 aa12.29□□□□□ -0.44
SNORD3C-201ENST00000580533 NUP85Q9BW27 656 aa12.29□□□□□ -0.44
SNORD3C-201ENST00000580533 TASP1Q9H6P5 420 aa12.29□□□□□ -0.44
SNORD3C-201ENST00000580533 TRPC7Q9HCX4 862 aa12.29□□□□□ -0.44
SNORD3C-201ENST00000580533 METTL5Q9NRN9 209 aaKnown RBP12.29□□□□□ -0.44
SNORD3C-201ENST00000580533 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.29□□□□□ -0.44
SNORD3C-201ENST00000580533 CHORDC1Q9UHD1 332 aaPredicted RBP12.29□□□□□ -0.44
SNORD3C-201ENST00000580533 IP6K2Q9UHH9 426 aa12.29□□□□□ -0.44
SNORD3C-201ENST00000580533 DNMT3LQ9UJW3 386 aa12.29□□□□□ -0.44
SNORD3C-201ENST00000580533 ADGRG1Q9Y653 693 aa12.29□□□□□ -0.44
SNORD3C-201ENST00000580533 MYO9BQ13459 2157 aa12.29□□□□□ -0.44
SNORD3C-201ENST00000580533 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.28□□□□□ -0.44
SNORD3C-201ENST00000580533 A0A1W2PRU2 124 aa12.28□□□□□ -0.44
SNORD3C-201ENST00000580533 PJA2O43164 708 aa12.28□□□□□ -0.44
SNORD3C-201ENST00000580533 RNF8O76064 485 aa12.28□□□□□ -0.44
SNORD3C-201ENST00000580533 CKMP06732 381 aa12.28□□□□□ -0.44
SNORD3C-201ENST00000580533 PDGFRAP16234 1089 aa12.28□□□□□ -0.44
SNORD3C-201ENST00000580533 NOP2P46087 812 aaKnown RBP12.28□□□□□ -0.44
SNORD3C-201ENST00000580533 RNASE9P60153 205 aaKnown RBP12.28□□□□□ -0.44
SNORD3C-201ENST00000580533 COG7P83436 770 aa12.28□□□□□ -0.44
SNORD3C-201ENST00000580533 PIGHQ14442 188 aaPredicted RBP12.28□□□□□ -0.44
SNORD3C-201ENST00000580533 CBX2Q14781 532 aaPredicted RBP12.28□□□□□ -0.44
SNORD3C-201ENST00000580533 MTF1Q14872 753 aa12.28□□□□□ -0.44
SNORD3C-201ENST00000580533 TCEAL1Q15170 157 aa12.28□□□□□ -0.44
SNORD3C-201ENST00000580533 PRSS36Q5K4E3 855 aa12.28□□□□□ -0.44
SNORD3C-201ENST00000580533 GPR158Q5T848 1215 aa12.28□□□□□ -0.44
SNORD3C-201ENST00000580533 ACBD5Q5T8D3 534 aaPredicted RBP12.28□□□□□ -0.44
SNORD3C-201ENST00000580533 OTOP3Q7RTS5 596 aa12.28□□□□□ -0.44
SNORD3C-201ENST00000580533 HS6ST3Q8IZP7 471 aa12.28□□□□□ -0.44
SNORD3C-201ENST00000580533 RNF10Q8N5U6 811 aaKnown RBP12.28□□□□□ -0.44
SNORD3C-201ENST00000580533 ACRBPQ8NEB7 543 aa12.28□□□□□ -0.44
SNORD3C-201ENST00000580533 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.28□□□□□ -0.44
SNORD3C-201ENST00000580533 CLEC4CQ8WTT0 213 aa12.28□□□□□ -0.44
SNORD3C-201ENST00000580533 ALS2CR12Q96Q35 445 aa12.28□□□□□ -0.44
SNORD3C-201ENST00000580533 LRRC3Q9BY71 257 aa12.28□□□□□ -0.44
SNORD3C-201ENST00000580533 S1PR5Q9H228 398 aa12.28□□□□□ -0.44
SNORD3C-201ENST00000580533 SMOC2Q9H3U7 446 aa12.28□□□□□ -0.44
SNORD3C-201ENST00000580533 FAM204AQ9H8W3 233 aa12.28□□□□□ -0.44
SNORD3C-201ENST00000580533 KIF9Q9HAQ2 790 aa12.28□□□□□ -0.44
SNORD3C-201ENST00000580533 IL21Q9HBE4 155 aa12.28□□□□□ -0.44
SNORD3C-201ENST00000580533 ZNF334Q9HCZ1 680 aaPredicted RBP12.28□□□□□ -0.44
SNORD3C-201ENST00000580533 HCFC1R1Q9NWW0 138 aa12.28□□□□□ -0.44
SNORD3C-201ENST00000580533 SLC12A6Q9UHW9 1150 aa12.28□□□□□ -0.44
SNORD3C-201ENST00000580533 NR2E1Q9Y466 385 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms