RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, human

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCE1-215	ENST00000578995	LGALS16	A8MUM7	142 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	BECN2	A8MW95	431 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	KCNJ18	B7U540	433 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	PDE2A	O00408	941 aa	Predicted RBP	4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	P4HA2	O15460	535 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	TEX33	O43247	280 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	XPOT	O43592	962 aa	Known RBP	4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	LETM1	O95202	739 aa	Predicted RBP	4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	SEC24A	O95486	1093 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	GNA14	O95837	355 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	TNNC2	P02585	160 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	AFP	P02771	609 aa	Known RBP	4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	FAM163B	P0C2L3	166 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	TMEM191B	P0C7N4	346 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	CCDC192	P0DO97	292 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	EPB41	P11171	864 aa	Known RBP	4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	EPCAM	P16422	314 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	RPL17	P18621	184 aa	Known RBP	4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	TNNI1	P19237	187 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	SLC9A1	P19634	815 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	PAX3	P23760	479 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	LMO2	P25791	158 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	PON1	P27169	355 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	ATIC	P31939	592 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	PNPLA4	P41247	253 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	KLK7	P49862	253 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	ZNF165	P49910	485 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	COPB1	P53618	953 aa	Known RBP	4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	CACNA2D1	P54289	1103 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	CDH8	P55286	799 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	NOP14	P78316	857 aa	Known RBP	4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	RBP5	P82980	135 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	MYL7	Q01449	175 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	ROR1	Q01973	937 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	ADAM15	Q13444	863 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	RAB33A	Q14088	237 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	KCNJ12	Q14500	433 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	PSMD5	Q16401	504 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	USP41	Q3LFD5	358 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	SV2C	Q496J9	727 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	TCEAL5	Q5H9L2	206 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	DCAF17	Q5H9S7	520 aa	Predicted RBP	4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	FAM171A1	Q5VUB5	890 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	PLPP4	Q5VZY2	271 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	WSCD1	Q658N2	575 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	KRT39	Q6A163	491 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	PDE12	Q6L8Q7	609 aa	Known RBP	4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	FAM171B	Q6P995	826 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	GJB7	Q6PEY0	223 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	SYCE2	Q6PIF2	218 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	TRIM65	Q6PJ69	517 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	DPH6	Q7L8W6	267 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	TTC9B	Q8N6N2	239 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	TOP6BL	Q8N6T0	577 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	EFHB	Q8N7U6	833 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	FBXL13	Q8NEE6	735 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	FAM200A	Q8TCP9	573 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	NOC3L	Q8WTT2	800 aa	Known RBP	4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	CACTIN	Q8WUQ7	758 aa	Known RBP	4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	RIN2	Q8WYP3	895 aa	Predicted RBP	4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	TAF4B	Q92750	862 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	SYAP1	Q96A49	352 aa	Predicted RBP	4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	ZNF707	Q96C28	371 aa	Predicted RBP	4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	HPDL	Q96IR7	371 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	FAXDC2	Q96IV6	333 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	ANKRD36BP1	Q96IX9	119 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	ZNF560	Q96MR9	790 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	KCNC2	Q96PR1	638 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	FAM193B	Q96PV7	902 aa	Predicted RBP	4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	FNBP1	Q96RU3	617 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	TCF25	Q9BQ70	676 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	TUBGCP2	Q9BSJ2	902 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	TTPAL	Q9BTX7	342 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	LRRC3	Q9BY71	257 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	TTYH3	Q9C0H2	523 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	ELOVL4	Q9GZR5	314 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	NIF3L1	Q9GZT8	377 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	INTS2	Q9H0H0	1204 aa	Known RBP	4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	ZCWPW1	Q9H0M4	648 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	S1PR5	Q9H228	398 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	EPB41L4B	Q9H329	900 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	NDST4	Q9H3R1	872 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	DPEP3	Q9H4B8	488 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	RAB20	Q9NX57	234 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	ABI2	Q9NYB9	513 aa	Predicted RBP	4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	TAB2	Q9NYJ8	693 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	CDH22	Q9UJ99	828 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	FBXL5	Q9UKA1	691 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	FBXW11	Q9UKB1	542 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	STXBP5L	Q9Y2K9	1186 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	TIMM13	Q9Y5L4	95 aa	Predicted RBP	4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	HCFC2	Q9Y5Z7	792 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	FANCM	Q8IYD8	2048 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	TTC28	Q96AY4	2481 aa		4.04	□□□□□ -1.76
SMARCE1-215	ENST00000578995	ARHGEF37	A1IGU5	675 aa		4.04	□□□□□ -1.76
SMARCE1-215	ENST00000578995	MYBPHL	A2RUH7	354 aa		4.04	□□□□□ -1.76
SMARCE1-215	ENST00000578995	MTMR11	A4FU01	709 aa		4.04	□□□□□ -1.76
SMARCE1-215	ENST00000578995	HHLA1	C9JL84	531 aa		4.04	□□□□□ -1.76
SMARCE1-215	ENST00000578995	OVOL3	O00110	214 aa		4.04	□□□□□ -1.76
SMARCE1-215	ENST00000578995	ETV2	O00321	342 aa	Predicted RBP	4.04	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms