RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 CHST7Q9NS84 486 aa21.14■□□□□ 0.97
SMG8-203ENST00000578922 DDX56Q9NY93 547 aaKnown RBP21.14■□□□□ 0.97
SMG8-203ENST00000578922 TRAPPC3O43617 180 aa21.13■□□□□ 0.97
SMG8-203ENST00000578922 TRUB2O95900 331 aaKnown RBP21.13■□□□□ 0.97
SMG8-203ENST00000578922 KRT7P08729 469 aa21.13■□□□□ 0.97
SMG8-203ENST00000578922 CD48P09326 243 aa21.13■□□□□ 0.97
SMG8-203ENST00000578922 NUDT17P0C025 328 aa21.13■□□□□ 0.97
SMG8-203ENST00000578922 TYMPP19971 482 aa21.13■□□□□ 0.97
SMG8-203ENST00000578922 CHRNA3P32297 505 aa21.13■□□□□ 0.97
SMG8-203ENST00000578922 SLC11A1P49279 550 aa21.13■□□□□ 0.97
SMG8-203ENST00000578922 TSPY1Q01534 308 aa21.13■□□□□ 0.97
SMG8-203ENST00000578922 ADCY1Q08828 1119 aa21.13■□□□□ 0.97
SMG8-203ENST00000578922 CROCCP2Q86T23 111 aa21.13■□□□□ 0.97
SMG8-203ENST00000578922 SMARCD1Q96GM5 515 aa21.13■□□□□ 0.97
SMG8-203ENST00000578922 CYLDQ9NQC7 956 aa21.13■□□□□ 0.97
SMG8-203ENST00000578922 ZDHHC18Q9NUE0 388 aa21.13■□□□□ 0.97
SMG8-203ENST00000578922 PAX3P23760 479 aa21.13■□□□□ 0.97
SMG8-203ENST00000578922 ITGB8P26012 769 aa21.13■□□□□ 0.97
SMG8-203ENST00000578922 CETN2P41208 172 aa21.13■□□□□ 0.97
SMG8-203ENST00000578922 SEC24CP53992 1094 aa21.13■□□□□ 0.97
SMG8-203ENST00000578922 KRT71Q3SY84 523 aa21.13■□□□□ 0.97
SMG8-203ENST00000578922 POLNQ7Z5Q5 900 aa21.13■□□□□ 0.97
SMG8-203ENST00000578922 TMCO2Q7Z6W1 182 aaPredicted RBP21.13■□□□□ 0.97
SMG8-203ENST00000578922 CCDC105Q8IYK2 499 aa21.13■□□□□ 0.97
SMG8-203ENST00000578922 RUNDC3BQ96NL0 473 aa21.13■□□□□ 0.97
SMG8-203ENST00000578922 PKMYT1Q99640 499 aa21.13■□□□□ 0.97
SMG8-203ENST00000578922 ADAM33Q9BZ11 813 aa21.13■□□□□ 0.97
SMG8-203ENST00000578922 ADAM28Q9UKQ2 775 aa21.13■□□□□ 0.97
SMG8-203ENST00000578922 ARHGEF37A1IGU5 675 aa21.12■□□□□ 0.97
SMG8-203ENST00000578922 TMEM189-UBE2V1I3L0A0 370 aa21.12■□□□□ 0.97
SMG8-203ENST00000578922 ALDH2P05091 517 aa21.12■□□□□ 0.97
SMG8-203ENST00000578922 COILP38432 576 aaPredicted RBP21.12■□□□□ 0.97
SMG8-203ENST00000578922 ATXN1P54253 815 aaKnown RBP21.12■□□□□ 0.97
SMG8-203ENST00000578922 IFFO1Q0D2I5 559 aa21.12■□□□□ 0.97
SMG8-203ENST00000578922 KLF1Q13351 362 aaPredicted RBP21.12■□□□□ 0.97
SMG8-203ENST00000578922 ACAP1Q15027 740 aa21.12■□□□□ 0.97
SMG8-203ENST00000578922 FAM171A1Q5VUB5 890 aa21.12■□□□□ 0.97
SMG8-203ENST00000578922 ICE2Q659A1 982 aa21.12■□□□□ 0.97
SMG8-203ENST00000578922 SPATA18Q8TC71 538 aa21.12■□□□□ 0.97
SMG8-203ENST00000578922 KCTD13Q8WZ19 329 aa21.12■□□□□ 0.97
SMG8-203ENST00000578922 VWCEQ96DN2 955 aa21.12■□□□□ 0.97
SMG8-203ENST00000578922 GPR62Q9BZJ7 368 aa21.12■□□□□ 0.97
SMG8-203ENST00000578922 ULBP1Q9BZM6 244 aa21.12■□□□□ 0.97
SMG8-203ENST00000578922 BCCIPQ9P287 314 aaKnown RBP eCLIP21.12■□□□□ 0.97
SMG8-203ENST00000578922 NOVA2Q9UNW9 492 aaKnown RBP21.12■□□□□ 0.97
SMG8-203ENST00000578922 DPYSL4O14531 572 aa21.12■□□□□ 0.97
SMG8-203ENST00000578922 PRPSAP2O60256 369 aa21.12■□□□□ 0.97
SMG8-203ENST00000578922 PARNO95453 639 aaKnown RBP21.12■□□□□ 0.97
SMG8-203ENST00000578922 MRPS5P82675 430 aaKnown RBP21.12■□□□□ 0.97
SMG8-203ENST00000578922 IKBKEQ14164 716 aa21.12■□□□□ 0.97
SMG8-203ENST00000578922 SLC39A12Q504Y0 691 aa21.12■□□□□ 0.97
SMG8-203ENST00000578922 C6orf89Q6UWU4 347 aa21.12■□□□□ 0.97
SMG8-203ENST00000578922 HFE2Q6ZVN8 426 aa21.12■□□□□ 0.97
SMG8-203ENST00000578922 KCTD6Q8NC69 237 aa21.12■□□□□ 0.97
SMG8-203ENST00000578922 CENPTQ96BT3 561 aa21.12■□□□□ 0.97
SMG8-203ENST00000578922 TLCD1Q96CP7 247 aa21.12■□□□□ 0.97
SMG8-203ENST00000578922 HAUS1Q96CS2 278 aa21.12■□□□□ 0.97
SMG8-203ENST00000578922 PPANQ9NQ55 473 aaKnown RBP21.12■□□□□ 0.97
SMG8-203ENST00000578922 GPATCH2LQ9NWQ4 482 aa21.12■□□□□ 0.97
SMG8-203ENST00000578922 PCYOX1Q9UHG3 505 aa21.12■□□□□ 0.97
SMG8-203ENST00000578922 C3orf70A6NLC5 250 aaPredicted RBP21.11■□□□□ 0.97
SMG8-203ENST00000578922 HOXA2O43364 376 aa21.11■□□□□ 0.97
SMG8-203ENST00000578922 USP17L7P0C7H9 530 aa21.11■□□□□ 0.97
SMG8-203ENST00000578922 PCK1P35558 622 aa21.11■□□□□ 0.97
SMG8-203ENST00000578922 CDKN2BP42772 138 aa21.11■□□□□ 0.97
SMG8-203ENST00000578922 DYNLT1P63172 113 aa21.11■□□□□ 0.97
SMG8-203ENST00000578922 CYP1B1Q16678 543 aa21.11■□□□□ 0.97
SMG8-203ENST00000578922 FAM117BQ6P1L5 589 aa21.11■□□□□ 0.97
SMG8-203ENST00000578922 TMEM173Q86WV6 379 aaPredicted RBP21.11■□□□□ 0.97
SMG8-203ENST00000578922 JAMLQ86YT9 394 aa21.11■□□□□ 0.97
SMG8-203ENST00000578922 DEFB106AQ8N104 65 aa21.11■□□□□ 0.97
SMG8-203ENST00000578922 CNPY4Q8N129 248 aa21.11■□□□□ 0.97
SMG8-203ENST00000578922 PABPC3Q9H361 631 aaKnown RBP21.11■□□□□ 0.97
SMG8-203ENST00000578922 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.11■□□□□ 0.97
SMG8-203ENST00000578922 MARCH5Q9NX47 278 aa21.11■□□□□ 0.97
SMG8-203ENST00000578922 hCG_1818297A0A087WSY0 165 aa21.1■□□□□ 0.97
SMG8-203ENST00000578922 SYNJ2BP-COX16A0A087WUM0 186 aa21.1■□□□□ 0.97
SMG8-203ENST00000578922 KDELR1P24390 212 aa21.1■□□□□ 0.97
SMG8-203ENST00000578922 PTGIRP43119 386 aa21.1■□□□□ 0.97
SMG8-203ENST00000578922 BYSLQ13895 437 aaKnown RBP21.1■□□□□ 0.97
SMG8-203ENST00000578922 PKN2Q16513 984 aaKnown RBP21.1■□□□□ 0.97
SMG8-203ENST00000578922 TFDP3Q5H9I0 405 aa21.1■□□□□ 0.97
SMG8-203ENST00000578922 EFHC1Q5JVL4 640 aa21.1■□□□□ 0.97
SMG8-203ENST00000578922 VARS2Q5ST30 1063 aaKnown RBP21.1■□□□□ 0.97
SMG8-203ENST00000578922 CYP4V2Q6ZWL3 525 aaPredicted RBP21.1■□□□□ 0.97
SMG8-203ENST00000578922 ANKLE1Q8NAG6 615 aa21.1■□□□□ 0.97
SMG8-203ENST00000578922 MAIP1Q8WWC4 291 aa21.1■□□□□ 0.97
SMG8-203ENST00000578922 CALN1Q9BXU9 219 aa21.1■□□□□ 0.97
SMG8-203ENST00000578922 FAM129AQ9BZQ8 928 aa21.1■□□□□ 0.97
SMG8-203ENST00000578922 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.1■□□□□ 0.97
SMG8-203ENST00000578922 COX16Q9P0S2 106 aa21.1■□□□□ 0.97
SMG8-203ENST00000578922 ATP8A1Q9Y2Q0 1164 aa21.1■□□□□ 0.97
SMG8-203ENST00000578922 TRIM43BA6NCK2 446 aa21.1■□□□□ 0.97
SMG8-203ENST00000578922 C5orf60A6NFR6 353 aa21.1■□□□□ 0.97
SMG8-203ENST00000578922 HSPA1AP0DMV8 641 aaKnown RBP21.1■□□□□ 0.97
SMG8-203ENST00000578922 HSPA1BP0DMV9 641 aaKnown RBP21.1■□□□□ 0.97
SMG8-203ENST00000578922 FNTAP49354 379 aa21.1■□□□□ 0.97
SMG8-203ENST00000578922 HDAC4P56524 1084 aa21.1■□□□□ 0.97
SMG8-203ENST00000578922 MAGOHP61326 146 aaKnown RBP21.1■□□□□ 0.97
SMG8-203ENST00000578922 DCAF6Q58WW2 860 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms