RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 ALG6Q9Y672 507 aa14.59□□□□□ -0.07
CSNK1D-209ENST00000578904 SAR1BQ9Y6B6 198 aa14.59□□□□□ -0.07
CSNK1D-209ENST00000578904 GREB1Q4ZG55 1949 aa14.58□□□□□ -0.07
CSNK1D-209ENST00000578904 TULP2O00295 520 aa14.58□□□□□ -0.08
CSNK1D-209ENST00000578904 CAPN9O14815 690 aa14.58□□□□□ -0.08
CSNK1D-209ENST00000578904 PAPSS1O43252 624 aaPredicted RBP14.58□□□□□ -0.08
CSNK1D-209ENST00000578904 XYLBO75191 536 aa14.58□□□□□ -0.08
CSNK1D-209ENST00000578904 BEST1O76090 585 aa14.58□□□□□ -0.08
CSNK1D-209ENST00000578904 PDGFRAP16234 1089 aa14.58□□□□□ -0.08
CSNK1D-209ENST00000578904 ATF6P18850 670 aa14.58□□□□□ -0.08
CSNK1D-209ENST00000578904 SDC4P31431 198 aa14.58□□□□□ -0.08
CSNK1D-209ENST00000578904 CETN2P41208 172 aa14.58□□□□□ -0.08
CSNK1D-209ENST00000578904 EPHB3P54753 998 aa14.58□□□□□ -0.08
CSNK1D-209ENST00000578904 RNASE9P60153 205 aaKnown RBP14.58□□□□□ -0.08
CSNK1D-209ENST00000578904 YWHAZP63104 245 aaKnown RBP14.58□□□□□ -0.08
CSNK1D-209ENST00000578904 RARS2Q5T160 578 aaKnown RBP14.58□□□□□ -0.08
CSNK1D-209ENST00000578904 SDHAF4Q5VUM1 108 aa14.58□□□□□ -0.08
CSNK1D-209ENST00000578904 PAPD7Q5XG87 772 aaKnown RBP14.58□□□□□ -0.08
CSNK1D-209ENST00000578904 NT5DC3Q86UY8 548 aa14.58□□□□□ -0.08
CSNK1D-209ENST00000578904 C12orf76Q8N812 135 aaPredicted RBP14.58□□□□□ -0.08
CSNK1D-209ENST00000578904 NIPA2Q8N8Q9 360 aa14.58□□□□□ -0.08
CSNK1D-209ENST00000578904 GIPC2Q8TF65 315 aa14.58□□□□□ -0.08
CSNK1D-209ENST00000578904 FAM149B1Q96BN6 582 aa14.58□□□□□ -0.08
CSNK1D-209ENST00000578904 PBKQ96KB5 322 aa14.58□□□□□ -0.08
CSNK1D-209ENST00000578904 CNPY3Q9BT09 278 aa14.58□□□□□ -0.08
CSNK1D-209ENST00000578904 APOL5Q9BWW9 433 aa14.58□□□□□ -0.08
CSNK1D-209ENST00000578904 UBE2ZQ9H832 354 aaPredicted RBP14.58□□□□□ -0.08
CSNK1D-209ENST00000578904 RRAGDQ9NQL2 400 aaPredicted RBP14.58□□□□□ -0.08
CSNK1D-209ENST00000578904 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.58□□□□□ -0.08
CSNK1D-209ENST00000578904 RNF14Q9UBS8 474 aa14.58□□□□□ -0.08
CSNK1D-209ENST00000578904 VCANP13611 3396 aa14.57□□□□□ -0.08
CSNK1D-209ENST00000578904 CCDC195A0A1B0GUA6 201 aa14.57□□□□□ -0.08
CSNK1D-209ENST00000578904 PIK3R2O00459 728 aa14.57□□□□□ -0.08
CSNK1D-209ENST00000578904 CES2O00748 559 aa14.57□□□□□ -0.08
CSNK1D-209ENST00000578904 FTCDO95954 541 aa14.57□□□□□ -0.08
CSNK1D-209ENST00000578904 HOXB8P17481 243 aaPredicted RBP14.57□□□□□ -0.08
CSNK1D-209ENST00000578904 COMTP21964 271 aa14.57□□□□□ -0.08
CSNK1D-209ENST00000578904 RFC1P35251 1148 aaPredicted RBP14.57□□□□□ -0.08
CSNK1D-209ENST00000578904 SSR1P43307 286 aaKnown RBP14.57□□□□□ -0.08
CSNK1D-209ENST00000578904 PSEN1P49768 467 aa14.57□□□□□ -0.08
CSNK1D-209ENST00000578904 ZNF143P52747 638 aaPredicted RBP14.57□□□□□ -0.08
CSNK1D-209ENST00000578904 DAOAP59103 153 aa14.57□□□□□ -0.08
CSNK1D-209ENST00000578904 RPL7AP62424 266 aaKnown RBP14.57□□□□□ -0.08
CSNK1D-209ENST00000578904 DLX2Q07687 328 aaPredicted RBP14.57□□□□□ -0.08
CSNK1D-209ENST00000578904 TAF12Q16514 161 aa14.57□□□□□ -0.08
CSNK1D-209ENST00000578904 PM20D1Q6GTS8 502 aa14.57□□□□□ -0.08
CSNK1D-209ENST00000578904 TMC5Q6UXY8 1006 aa14.57□□□□□ -0.08
CSNK1D-209ENST00000578904 DENND5BQ6ZUT9 1274 aa14.57□□□□□ -0.08
CSNK1D-209ENST00000578904 ZMIZ2Q8NF64 920 aa14.57□□□□□ -0.08
CSNK1D-209ENST00000578904 CMASQ8NFW8 434 aaPredicted RBP14.57□□□□□ -0.08
CSNK1D-209ENST00000578904 GPR152Q8TDT2 470 aa14.57□□□□□ -0.08
CSNK1D-209ENST00000578904 ULBP1Q9BZM6 244 aa14.57□□□□□ -0.08
CSNK1D-209ENST00000578904 PIDD1Q9HB75 910 aa14.57□□□□□ -0.08
CSNK1D-209ENST00000578904 POPDC2Q9HBU9 364 aa14.57□□□□□ -0.08
CSNK1D-209ENST00000578904 TMEM30AQ9NV96 361 aa14.57□□□□□ -0.08
CSNK1D-209ENST00000578904 CLEC1BQ9P126 229 aa14.57□□□□□ -0.08
CSNK1D-209ENST00000578904 TMEM59LQ9UK28 342 aa14.57□□□□□ -0.08
CSNK1D-209ENST00000578904 SNX12Q9UMY4 172 aa14.57□□□□□ -0.08
CSNK1D-209ENST00000578904 HHLA1C9JL84 531 aa14.56□□□□□ -0.08
CSNK1D-209ENST00000578904 DPYSL4O14531 572 aa14.56□□□□□ -0.08
CSNK1D-209ENST00000578904 ENC1O14682 589 aa14.56□□□□□ -0.08
CSNK1D-209ENST00000578904 PSTPIP1O43586 416 aa14.56□□□□□ -0.08
CSNK1D-209ENST00000578904 DAB1O75553 588 aa14.56□□□□□ -0.08
CSNK1D-209ENST00000578904 KRT7P08729 469 aa14.56□□□□□ -0.08
CSNK1D-209ENST00000578904 POU2F2P09086 479 aa14.56□□□□□ -0.08
CSNK1D-209ENST00000578904 KCNA5P22460 613 aa14.56□□□□□ -0.08
CSNK1D-209ENST00000578904 YWHAQP27348 245 aa14.56□□□□□ -0.08
CSNK1D-209ENST00000578904 NOS2P35228 1153 aa14.56□□□□□ -0.08
CSNK1D-209ENST00000578904 LTBRP36941 435 aa14.56□□□□□ -0.08
CSNK1D-209ENST00000578904 MATKP42679 507 aa14.56□□□□□ -0.08
CSNK1D-209ENST00000578904 PAFAH1B1P43034 410 aa14.56□□□□□ -0.08
CSNK1D-209ENST00000578904 SLC5A3P53794 718 aa14.56□□□□□ -0.08
CSNK1D-209ENST00000578904 CKAP4Q07065 602 aaKnown RBP14.56□□□□□ -0.08
CSNK1D-209ENST00000578904 CCDC181Q5TID7 509 aa14.56□□□□□ -0.08
CSNK1D-209ENST00000578904 SYCE2Q6PIF2 218 aa14.56□□□□□ -0.08
CSNK1D-209ENST00000578904 BEND5Q7L4P6 421 aa14.56□□□□□ -0.08
CSNK1D-209ENST00000578904 ITIH5Q86UX2 942 aa14.56□□□□□ -0.08
CSNK1D-209ENST00000578904 RHOT1Q8IXI2 618 aa14.56□□□□□ -0.08
CSNK1D-209ENST00000578904 STKLD1Q8NE28 680 aa14.56□□□□□ -0.08
CSNK1D-209ENST00000578904 RXFP2Q8WXD0 754 aa14.56□□□□□ -0.08
CSNK1D-209ENST00000578904 SMG7Q92540 1137 aaKnown RBP14.56□□□□□ -0.08
CSNK1D-209ENST00000578904 HLA-CQ95604 372 aa14.56□□□□□ -0.08
CSNK1D-209ENST00000578904 HES6Q96HZ4 224 aa14.56□□□□□ -0.08
CSNK1D-209ENST00000578904 SLITRK1Q96PX8 696 aa14.56□□□□□ -0.08
CSNK1D-209ENST00000578904 NAP1L3Q99457 506 aaPredicted RBP14.56□□□□□ -0.08
CSNK1D-209ENST00000578904 PRKD2Q9BZL6 878 aa14.56□□□□□ -0.08
CSNK1D-209ENST00000578904 TJP2Q9UDY2 1190 aa14.56□□□□□ -0.08
CSNK1D-209ENST00000578904 CHORDC1Q9UHD1 332 aaPredicted RBP14.56□□□□□ -0.08
CSNK1D-209ENST00000578904 CDC23Q9UJX2 597 aa14.56□□□□□ -0.08
CSNK1D-209ENST00000578904 USP3Q9Y6I4 520 aa14.56□□□□□ -0.08
CSNK1D-209ENST00000578904 C2CD4BA6NLJ0 364 aa14.55□□□□□ -0.08
CSNK1D-209ENST00000578904 SLC38A8A6NNN8 435 aa14.55□□□□□ -0.08
CSNK1D-209ENST00000578904 H3BQ06 376 aaPredicted RBP14.55□□□□□ -0.08
CSNK1D-209ENST00000578904 F9P00740 461 aa14.55□□□□□ -0.08
CSNK1D-209ENST00000578904 LTFP02788 710 aa14.55□□□□□ -0.08
CSNK1D-209ENST00000578904 ATP1A1P05023 1023 aaKnown RBP14.55□□□□□ -0.08
CSNK1D-209ENST00000578904 USP17L7P0C7H9 530 aa14.55□□□□□ -0.08
CSNK1D-209ENST00000578904 CSH1P0DML2 217 aa14.55□□□□□ -0.08
CSNK1D-209ENST00000578904 CSH2P0DML3 217 aa14.55□□□□□ -0.08
CSNK1D-209ENST00000578904 CTNNA2P26232 953 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms