RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 ANGPTL2Q9UKU9 493 aa10.73□□□□□ -0.69
SS18-210ENST00000578700 TFR2Q9UP52 801 aa10.73□□□□□ -0.69
SS18-210ENST00000578700 CEP83Q9Y592 693 aa10.73□□□□□ -0.69
SS18-210ENST00000578700 MRFAP1Q9Y605 127 aa10.73□□□□□ -0.69
SS18-210ENST00000578700 DUSP10Q9Y6W6 482 aa10.73□□□□□ -0.69
SS18-210ENST00000578700 GREB1Q4ZG55 1949 aa10.73□□□□□ -0.69
SS18-210ENST00000578700 BAHCC1Q9P281 2608 aa10.73□□□□□ -0.69
SS18-210ENST00000578700 CITO14578 2027 aa10.73□□□□□ -0.69
SS18-210ENST00000578700 THAP12O43422 761 aa10.72□□□□□ -0.69
SS18-210ENST00000578700 MED7O43513 233 aa10.72□□□□□ -0.69
SS18-210ENST00000578700 LRP3O75074 770 aa10.72□□□□□ -0.69
SS18-210ENST00000578700 MOSPD3O75425 235 aa10.72□□□□□ -0.69
SS18-210ENST00000578700 ABL1P00519 1130 aa10.72□□□□□ -0.69
SS18-210ENST00000578700 CST3P01034 146 aaPredicted RBP10.72□□□□□ -0.69
SS18-210ENST00000578700 FTLP02792 175 aaPredicted RBP10.72□□□□□ -0.69
SS18-210ENST00000578700 MYBL1P10243 752 aa10.72□□□□□ -0.69
SS18-210ENST00000578700 CPB1P15086 417 aa10.72□□□□□ -0.69
SS18-210ENST00000578700 TCP1P17987 556 aaKnown RBP10.72□□□□□ -0.69
SS18-210ENST00000578700 ABCB4P21439 1286 aa10.72□□□□□ -0.69
SS18-210ENST00000578700 GNA15P30679 374 aa10.72□□□□□ -0.69
SS18-210ENST00000578700 NSFP46459 744 aaKnown RBP10.72□□□□□ -0.69
SS18-210ENST00000578700 LRRC32Q14392 662 aa10.72□□□□□ -0.69
SS18-210ENST00000578700 SF3A2Q15428 464 aaKnown RBP10.72□□□□□ -0.69
SS18-210ENST00000578700 WDR72Q3MJ13 1102 aa10.72□□□□□ -0.69
SS18-210ENST00000578700 CCDC181Q5TID7 509 aa10.72□□□□□ -0.69
SS18-210ENST00000578700 PAPD7Q5XG87 772 aaKnown RBP10.72□□□□□ -0.69
SS18-210ENST00000578700 SPOPLQ6IQ16 392 aa10.72□□□□□ -0.69
SS18-210ENST00000578700 MAMSTRQ6ZN01 415 aa10.72□□□□□ -0.69
SS18-210ENST00000578700 Q6ZS52 159 aa10.72□□□□□ -0.69
SS18-210ENST00000578700 NOP9Q86U38 636 aaKnown RBP10.72□□□□□ -0.69
SS18-210ENST00000578700 LONP2Q86WA8 852 aa10.72□□□□□ -0.69
SS18-210ENST00000578700 MFSD6LQ8IWD5 586 aa10.72□□□□□ -0.69
SS18-210ENST00000578700 EFCAB13Q8IY85 973 aa10.72□□□□□ -0.69
SS18-210ENST00000578700 TCEAL8Q8IYN2 117 aa10.72□□□□□ -0.69
SS18-210ENST00000578700 SPEM1Q8N4L4 309 aa10.72□□□□□ -0.69
SS18-210ENST00000578700 FAM160A2Q8N612 972 aaPredicted RBP10.72□□□□□ -0.69
SS18-210ENST00000578700 C12orf50Q8NA57 414 aaPredicted RBP10.72□□□□□ -0.69
SS18-210ENST00000578700 SLC20A1Q8WUM9 679 aa10.72□□□□□ -0.69
SS18-210ENST00000578700 RFFLQ8WZ73 363 aa10.72□□□□□ -0.69
SS18-210ENST00000578700 UBXN4Q92575 508 aa10.72□□□□□ -0.69
SS18-210ENST00000578700 HPDLQ96IR7 371 aa10.72□□□□□ -0.69
SS18-210ENST00000578700 PGLYRP2Q96PD5 576 aa10.72□□□□□ -0.69
SS18-210ENST00000578700 SYT11Q9BT88 431 aa10.72□□□□□ -0.69
SS18-210ENST00000578700 IER2Q9BTL4 223 aa10.72□□□□□ -0.69
SS18-210ENST00000578700 PACSIN1Q9BY11 444 aa10.72□□□□□ -0.69
SS18-210ENST00000578700 ARRDC1-AS1Q9H2J1 176 aa10.72□□□□□ -0.69
SS18-210ENST00000578700 CYP3A43Q9HB55 503 aa10.72□□□□□ -0.69
SS18-210ENST00000578700 ASAH2Q9NR71 780 aa10.72□□□□□ -0.69
SS18-210ENST00000578700 CTTNBP2NLQ9P2B4 639 aa10.72□□□□□ -0.69
SS18-210ENST00000578700 NXF1Q9UBU9 619 aaKnown RBP10.72□□□□□ -0.69
SS18-210ENST00000578700 UBQLN1Q9UMX0 589 aaKnown RBP10.72□□□□□ -0.69
SS18-210ENST00000578700 NENFQ9UMX5 172 aa10.72□□□□□ -0.69
SS18-210ENST00000578700 AGAP1Q9UPQ3 857 aa10.72□□□□□ -0.69
SS18-210ENST00000578700 HYOU1Q9Y4L1 999 aa10.72□□□□□ -0.69
SS18-210ENST00000578700 SDK1Q7Z5N4 2213 aa10.72□□□□□ -0.69
SS18-210ENST00000578700 ATRXP46100 2492 aa10.72□□□□□ -0.69
SS18-210ENST00000578700 A0A1W2PRU2 124 aa10.71□□□□□ -0.69
SS18-210ENST00000578700 DPYSL4O14531 572 aa10.71□□□□□ -0.69
SS18-210ENST00000578700 NCANO14594 1321 aa10.71□□□□□ -0.69
SS18-210ENST00000578700 PALMO75781 387 aa10.71□□□□□ -0.69
SS18-210ENST00000578700 MICAL2O94851 1124 aa10.71□□□□□ -0.69
SS18-210ENST00000578700 MMEP08473 750 aa10.71□□□□□ -0.69
SS18-210ENST00000578700 PRLRP16471 622 aa10.71□□□□□ -0.69
SS18-210ENST00000578700 CD58P19256 250 aa10.71□□□□□ -0.69
SS18-210ENST00000578700 POLR2BP30876 1174 aaKnown RBP10.71□□□□□ -0.69
SS18-210ENST00000578700 CNR2P34972 360 aa10.71□□□□□ -0.69
SS18-210ENST00000578700 PNPLA4P41247 253 aa10.71□□□□□ -0.69
SS18-210ENST00000578700 PXNP49023 591 aaPredicted RBP10.71□□□□□ -0.69
SS18-210ENST00000578700 PON2Q15165 354 aa10.71□□□□□ -0.69
SS18-210ENST00000578700 TPGS2Q68CL5 300 aa10.71□□□□□ -0.69
SS18-210ENST00000578700 ACAD10Q6JQN1 1059 aa10.71□□□□□ -0.69
SS18-210ENST00000578700 CCDC70Q6NSX1 233 aa10.71□□□□□ -0.69
SS18-210ENST00000578700 RNF19BQ6ZMZ0 732 aa10.71□□□□□ -0.69
SS18-210ENST00000578700 WDFY3Q8IZQ1 3526 aa10.71□□□□□ -0.69
SS18-210ENST00000578700 C1orf127Q8N9H9 656 aa10.71□□□□□ -0.69
SS18-210ENST00000578700 DDX1Q92499 740 aaKnown RBP10.71□□□□□ -0.69
SS18-210ENST00000578700 C18orf25Q96B23 403 aaPredicted RBP10.71□□□□□ -0.69
SS18-210ENST00000578700 ZFYVE19Q96K21 471 aa10.71□□□□□ -0.69
SS18-210ENST00000578700 FAM84AQ96KN4 292 aa10.71□□□□□ -0.69
SS18-210ENST00000578700 ZMAT2Q96NC0 199 aaKnown RBP10.71□□□□□ -0.69
SS18-210ENST00000578700 ARID3AQ99856 593 aa10.71□□□□□ -0.69
SS18-210ENST00000578700 CARD6Q9BX69 1037 aa10.71□□□□□ -0.69
SS18-210ENST00000578700 ISCUQ9H1K1 167 aa10.71□□□□□ -0.69
SS18-210ENST00000578700 C8orf33Q9H7E9 229 aaPredicted RBP10.71□□□□□ -0.69
SS18-210ENST00000578700 APOBEC3GQ9HC16 384 aaKnown RBP10.71□□□□□ -0.69
SS18-210ENST00000578700 TRPV5Q9NQA5 729 aa10.71□□□□□ -0.69
SS18-210ENST00000578700 CISHQ9NSE2 258 aa10.71□□□□□ -0.69
SS18-210ENST00000578700 SLC38A7Q9NVC3 462 aa10.71□□□□□ -0.69
SS18-210ENST00000578700 C2orf42Q9NWW7 574 aa10.71□□□□□ -0.69
SS18-210ENST00000578700 CNTN6Q9UQ52 1028 aa10.71□□□□□ -0.69
SS18-210ENST00000578700 CAPN6Q9Y6Q1 641 aa10.71□□□□□ -0.69
SS18-210ENST00000578700 ANKRD11Q6UB99 2663 aaPredicted RBP10.7□□□□□ -0.7
SS18-210ENST00000578700 CTAGE15A4D2H0 777 aa10.7□□□□□ -0.7
SS18-210ENST00000578700 EFCAB8A8MWE9 144 aa10.7□□□□□ -0.7
SS18-210ENST00000578700 K7ESF4 209 aa10.7□□□□□ -0.7
SS18-210ENST00000578700 ENC1O14682 589 aa10.7□□□□□ -0.7
SS18-210ENST00000578700 SYN3O14994 580 aa10.7□□□□□ -0.7
SS18-210ENST00000578700 CTIFO43310 598 aaKnown RBP10.7□□□□□ -0.7
SS18-210ENST00000578700 LSM8O95777 96 aaKnown RBP10.7□□□□□ -0.7
SS18-210ENST00000578700 STAU1O95793 577 aaKnown RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms