RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 SMG5Q9UPR3 1016 aaKnown RBP24.16■■□□□ 1.46
VAPA-205ENST00000578314 SLC8A2Q9UPR5 921 aa24.16■■□□□ 1.46
VAPA-205ENST00000578314 CCDC163A0A0D9SF12 145 aa24.15■■□□□ 1.46
VAPA-205ENST00000578314 O00370 1275 aa24.15■■□□□ 1.46
VAPA-205ENST00000578314 XPO1O14980 1071 aaKnown RBP24.15■■□□□ 1.46
VAPA-205ENST00000578314 HRO43593 1189 aa24.15■■□□□ 1.46
VAPA-205ENST00000578314 IRF1P10914 325 aa24.15■■□□□ 1.46
VAPA-205ENST00000578314 RALAP11233 206 aa24.15■■□□□ 1.46
VAPA-205ENST00000578314 SLC6A11P48066 632 aa24.15■■□□□ 1.46
VAPA-205ENST00000578314 BCAT1P54687 386 aa24.15■■□□□ 1.46
VAPA-205ENST00000578314 GCNT1Q02742 428 aa24.15■■□□□ 1.46
VAPA-205ENST00000578314 GAD2Q05329 585 aa24.15■■□□□ 1.46
VAPA-205ENST00000578314 PDE4CQ08493 712 aa24.15■■□□□ 1.46
VAPA-205ENST00000578314 C10orf120Q5SQS8 335 aa24.15■■□□□ 1.46
VAPA-205ENST00000578314 PM20D1Q6GTS8 502 aa24.15■■□□□ 1.46
VAPA-205ENST00000578314 TMEM270Q6UE05 265 aa24.15■■□□□ 1.46
VAPA-205ENST00000578314 SYT13Q7L8C5 426 aa24.15■■□□□ 1.46
VAPA-205ENST00000578314 WDR5BQ86VZ2 330 aa24.15■■□□□ 1.46
VAPA-205ENST00000578314 ARHGAP18Q8N392 663 aa24.15■■□□□ 1.46
VAPA-205ENST00000578314 CAMKK1Q8N5S9 505 aa24.15■■□□□ 1.46
VAPA-205ENST00000578314 RPLP0P6Q8NHW5 317 aa24.15■■□□□ 1.46
VAPA-205ENST00000578314 KAT5Q92993 513 aa24.15■■□□□ 1.46
VAPA-205ENST00000578314 CDK5RAP1Q96SZ6 601 aaKnown RBP24.15■■□□□ 1.46
VAPA-205ENST00000578314 PNKPQ96T60 521 aa24.15■■□□□ 1.46
VAPA-205ENST00000578314 HESX1Q9UBX0 185 aa24.15■■□□□ 1.46
VAPA-205ENST00000578314 NUDT5Q9UKK9 219 aa24.15■■□□□ 1.46
VAPA-205ENST00000578314 RNF225M0QZC1 329 aaPredicted RBP24.14■■□□□ 1.45
VAPA-205ENST00000578314 TULP2O00295 520 aa24.14■■□□□ 1.45
VAPA-205ENST00000578314 HOXC11O43248 304 aaPredicted RBP24.14■■□□□ 1.45
VAPA-205ENST00000578314 TKTL1P51854 596 aa24.14■■□□□ 1.45
VAPA-205ENST00000578314 GOLGA8FQ08AF8 430 aa24.14■■□□□ 1.45
VAPA-205ENST00000578314 GOLGA8DPQ0D2H9 430 aa24.14■■□□□ 1.45
VAPA-205ENST00000578314 BST2Q10589 180 aaKnown RBP24.14■■□□□ 1.45
VAPA-205ENST00000578314 PKDCCQ504Y2 493 aa24.14■■□□□ 1.45
VAPA-205ENST00000578314 HEATR6Q6AI08 1181 aaKnown RBP24.14■■□□□ 1.45
VAPA-205ENST00000578314 LCLAT1Q6UWP7 414 aa24.14■■□□□ 1.45
VAPA-205ENST00000578314 TFAP2BQ92481 460 aa24.14■■□□□ 1.45
VAPA-205ENST00000578314 SPHK2Q9NRA0 654 aa24.14■■□□□ 1.45
VAPA-205ENST00000578314 NCDNQ9UBB6 729 aa24.14■■□□□ 1.45
VAPA-205ENST00000578314 PCDHB4Q9Y5E5 795 aa24.14■■□□□ 1.45
VAPA-205ENST00000578314 MDM4O15151 490 aa24.13■■□□□ 1.45
VAPA-205ENST00000578314 ZBED1O96006 694 aa24.13■■□□□ 1.45
VAPA-205ENST00000578314 FOXK2Q01167 660 aa24.13■■□□□ 1.45
VAPA-205ENST00000578314 CNGA2Q16280 664 aa24.13■■□□□ 1.45
VAPA-205ENST00000578314 RRAGAQ7L523 313 aa24.13■■□□□ 1.45
VAPA-205ENST00000578314 C12orf40Q86WS4 652 aa24.13■■□□□ 1.45
VAPA-205ENST00000578314 TMEM25Q86YD3 366 aa24.13■■□□□ 1.45
VAPA-205ENST00000578314 ARHGEF19Q8IW93 802 aa24.13■■□□□ 1.45
VAPA-205ENST00000578314 ETFBKMTQ8IXQ9 262 aa24.13■■□□□ 1.45
VAPA-205ENST00000578314 USP33Q8TEY7 942 aa24.13■■□□□ 1.45
VAPA-205ENST00000578314 ACDQ96AP0 544 aa24.13■■□□□ 1.45
VAPA-205ENST00000578314 POLR3BQ9NW08 1133 aaPredicted RBP24.13■■□□□ 1.45
VAPA-205ENST00000578314 LSM7Q9UK45 103 aaKnown RBP24.13■■□□□ 1.45
VAPA-205ENST00000578314 PALM2-AKAP2B1ALY0 433 aaPredicted RBP24.12■■□□□ 1.45
VAPA-205ENST00000578314 KAT7O95251 611 aa24.12■■□□□ 1.45
VAPA-205ENST00000578314 SETSIPP0DME0 302 aa24.12■■□□□ 1.45
VAPA-205ENST00000578314 MESP2Q0VG99 397 aa24.12■■□□□ 1.45
VAPA-205ENST00000578314 PHTF2Q8N3S3 785 aa24.12■■□□□ 1.45
VAPA-205ENST00000578314 UBA3Q8TBC4 463 aa24.12■■□□□ 1.45
VAPA-205ENST00000578314 KCTD13Q8WZ19 329 aa24.12■■□□□ 1.45
VAPA-205ENST00000578314 ZSWIM1Q9BR11 485 aa24.12■■□□□ 1.45
VAPA-205ENST00000578314 INTS2Q9H0H0 1204 aaKnown RBP24.12■■□□□ 1.45
VAPA-205ENST00000578314 CNTN6Q9UQ52 1028 aa24.12■■□□□ 1.45
VAPA-205ENST00000578314 GRIA2P42262 883 aa24.11■■□□□ 1.45
VAPA-205ENST00000578314 ZNF132P52740 706 aa24.11■■□□□ 1.45
VAPA-205ENST00000578314 YWHAGP61981 247 aaKnown RBP eCLIP24.11■■□□□ 1.45
VAPA-205ENST00000578314 MRPS21P82921 87 aaKnown RBP24.11■■□□□ 1.45
VAPA-205ENST00000578314 COG7P83436 770 aa24.11■■□□□ 1.45
VAPA-205ENST00000578314 SIM2Q14190 667 aaPredicted RBP24.11■■□□□ 1.45
VAPA-205ENST00000578314 DMC1Q14565 340 aa24.11■■□□□ 1.45
VAPA-205ENST00000578314 STILQ15468 1287 aa24.11■■□□□ 1.45
VAPA-205ENST00000578314 BTBD8Q5XKL5 378 aa24.11■■□□□ 1.45
VAPA-205ENST00000578314 Q6ZNB5 142 aa24.11■■□□□ 1.45
VAPA-205ENST00000578314 BHLHA9Q7RTU4 235 aa24.11■■□□□ 1.45
VAPA-205ENST00000578314 ERMP1Q7Z2K6 904 aa24.11■■□□□ 1.45
VAPA-205ENST00000578314 IRF2BP1Q8IU81 584 aa24.11■■□□□ 1.45
VAPA-205ENST00000578314 SECISBP2LQ93073 1101 aaKnown RBP24.11■■□□□ 1.45
VAPA-205ENST00000578314 RMDN1Q96DB5 314 aa24.11■■□□□ 1.45
VAPA-205ENST00000578314 CNOT6LQ96LI5 555 aaKnown RBP24.11■■□□□ 1.45
VAPA-205ENST00000578314 KREMEN1Q96MU8 473 aa24.11■■□□□ 1.45
VAPA-205ENST00000578314 ULBP1Q9BZM6 244 aa24.11■■□□□ 1.45
VAPA-205ENST00000578314 LRRC4Q9HBW1 653 aa24.11■■□□□ 1.45
VAPA-205ENST00000578314 RAB23Q9ULC3 237 aa24.11■■□□□ 1.45
VAPA-205ENST00000578314 STC2O76061 302 aa24.1■■□□□ 1.45
VAPA-205ENST00000578314 APODP05090 189 aa24.1■■□□□ 1.45
VAPA-205ENST00000578314 CHRM1P11229 460 aaPredicted RBP24.1■■□□□ 1.45
VAPA-205ENST00000578314 TNFRSF4P43489 277 aa24.1■■□□□ 1.45
VAPA-205ENST00000578314 PXNP49023 591 aaPredicted RBP24.1■■□□□ 1.45
VAPA-205ENST00000578314 SRSF5Q13243 272 aaKnown RBP24.1■■□□□ 1.45
VAPA-205ENST00000578314 C2orf27AQ580R0 203 aa24.1■■□□□ 1.45
VAPA-205ENST00000578314 MIB1Q86YT6 1006 aa24.1■■□□□ 1.45
VAPA-205ENST00000578314 SCML4Q8N228 414 aa24.1■■□□□ 1.45
VAPA-205ENST00000578314 RBBP8NLQ8NC74 664 aaPredicted RBP24.1■■□□□ 1.45
VAPA-205ENST00000578314 SLC35F5Q8WV83 523 aa24.1■■□□□ 1.45
VAPA-205ENST00000578314 ARHGEF4Q9NR80 690 aa24.1■■□□□ 1.45
VAPA-205ENST00000578314 MARK1Q9P0L2 795 aa24.1■■□□□ 1.45
VAPA-205ENST00000578314 WDR3Q9UNX4 943 aaKnown RBP eCLIP24.1■■□□□ 1.45
VAPA-205ENST00000578314 MYH10P35580 1976 aa24.1■■□□□ 1.45
VAPA-205ENST00000578314 ANTXRLA6NF34 631 aa24.09■■□□□ 1.45
VAPA-205ENST00000578314 TULP3O75386 442 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms