RNA–Protein interactions for RNA: ENST00000578234.1

SMARCD2-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 595 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-207ENST00000578234 NUDT18Q6ZVK8 323 aa13.29□□□□□ -0.28
SMARCD2-207ENST00000578234 SV2AQ7L0J3 742 aa13.29□□□□□ -0.28
SMARCD2-207ENST00000578234 UNC93AQ86WB7 457 aa13.29□□□□□ -0.28
SMARCD2-207ENST00000578234 TMEFF1Q8IYR6 380 aa13.29□□□□□ -0.28
SMARCD2-207ENST00000578234 KIAA0895Q8NCT3 520 aa13.29□□□□□ -0.28
SMARCD2-207ENST00000578234 ZMIZ2Q8NF64 920 aa13.29□□□□□ -0.28
SMARCD2-207ENST00000578234 TMC2Q8TDI7 906 aa13.29□□□□□ -0.28
SMARCD2-207ENST00000578234 WHAMMQ8TF30 809 aa13.29□□□□□ -0.28
SMARCD2-207ENST00000578234 ERCC4Q92889 916 aaPredicted RBP13.29□□□□□ -0.28
SMARCD2-207ENST00000578234 SPACA7Q96KW9 195 aa13.29□□□□□ -0.28
SMARCD2-207ENST00000578234 SMOQ99835 787 aa13.29□□□□□ -0.28
SMARCD2-207ENST00000578234 FBXO44Q9H4M3 255 aa13.29□□□□□ -0.28
SMARCD2-207ENST00000578234 SPHK2Q9NRA0 654 aa13.29□□□□□ -0.28
SMARCD2-207ENST00000578234 KRT82Q9NSB4 513 aa13.29□□□□□ -0.28
SMARCD2-207ENST00000578234 EXOC1Q9NV70 894 aa13.29□□□□□ -0.28
SMARCD2-207ENST00000578234 TBC1D3BA6NDS4 549 aa13.28□□□□□ -0.28
SMARCD2-207ENST00000578234 ADAM23O75077 832 aa13.28□□□□□ -0.28
SMARCD2-207ENST00000578234 TULP3O75386 442 aa13.28□□□□□ -0.28
SMARCD2-207ENST00000578234 BEST1O76090 585 aa13.28□□□□□ -0.28
SMARCD2-207ENST00000578234 NR3C1P04150 777 aa13.28□□□□□ -0.28
SMARCD2-207ENST00000578234 CFIP05156 583 aa13.28□□□□□ -0.28
SMARCD2-207ENST00000578234 MYL1P05976 194 aa13.28□□□□□ -0.28
SMARCD2-207ENST00000578234 ATXN3P54252 364 aaPredicted RBP13.28□□□□□ -0.28
SMARCD2-207ENST00000578234 IRX4P78413 519 aa13.28□□□□□ -0.28
SMARCD2-207ENST00000578234 BYSLQ13895 437 aaKnown RBP13.28□□□□□ -0.28
SMARCD2-207ENST00000578234 ANO4Q32M45 955 aa13.28□□□□□ -0.28
SMARCD2-207ENST00000578234 SPDYCQ5MJ68 293 aa13.28□□□□□ -0.28
SMARCD2-207ENST00000578234 KIAA1211LQ6NV74 962 aa13.28□□□□□ -0.28
SMARCD2-207ENST00000578234 SCARA5Q6ZMJ2 495 aa13.28□□□□□ -0.28
SMARCD2-207ENST00000578234 HTR3DQ70Z44 454 aa13.28□□□□□ -0.28
SMARCD2-207ENST00000578234 LPCAT2Q7L5N7 544 aa13.28□□□□□ -0.28
SMARCD2-207ENST00000578234 BBS7Q8IWZ6 715 aa13.28□□□□□ -0.28
SMARCD2-207ENST00000578234 SLC2A14Q8TDB8 520 aa13.28□□□□□ -0.28
SMARCD2-207ENST00000578234 ELMO3Q96BJ8 720 aa13.28□□□□□ -0.28
SMARCD2-207ENST00000578234 TLR8Q9NR97 1041 aaKnown RBP13.28□□□□□ -0.28
SMARCD2-207ENST00000578234 GMIPQ9P107 970 aa13.28□□□□□ -0.28
SMARCD2-207ENST00000578234 DEC1Q9P2X7 70 aa13.28□□□□□ -0.28
SMARCD2-207ENST00000578234 EVLQ9UI08 416 aaPredicted RBP13.28□□□□□ -0.28
SMARCD2-207ENST00000578234 CDX4O14627 284 aaPredicted RBP13.27□□□□□ -0.29
SMARCD2-207ENST00000578234 MAPK13O15264 365 aa13.27□□□□□ -0.29
SMARCD2-207ENST00000578234 TLR5O60602 858 aa13.27□□□□□ -0.29
SMARCD2-207ENST00000578234 ASS1P00966 412 aaKnown RBP13.27□□□□□ -0.29
SMARCD2-207ENST00000578234 CCDC130P13994 396 aa13.27□□□□□ -0.29
SMARCD2-207ENST00000578234 TRIM21P19474 475 aaKnown RBP13.27□□□□□ -0.29
SMARCD2-207ENST00000578234 WASP42768 502 aa13.27□□□□□ -0.29
SMARCD2-207ENST00000578234 NDST1P52848 882 aa13.27□□□□□ -0.29
SMARCD2-207ENST00000578234 MAP3K7CLP57077 242 aa13.27□□□□□ -0.29
SMARCD2-207ENST00000578234 DPYDQ12882 1025 aa13.27□□□□□ -0.29
SMARCD2-207ENST00000578234 TRIM61Q5EBN2 209 aa13.27□□□□□ -0.29
SMARCD2-207ENST00000578234 CLEC17AQ6ZS10 378 aa13.27□□□□□ -0.29
SMARCD2-207ENST00000578234 TRMT11Q7Z4G4 463 aaKnown RBP13.27□□□□□ -0.29
SMARCD2-207ENST00000578234 TMEM25Q86YD3 366 aa13.27□□□□□ -0.29
SMARCD2-207ENST00000578234 FRMD1Q8N878 549 aa13.27□□□□□ -0.29
SMARCD2-207ENST00000578234 C12orf29Q8N999 325 aa13.27□□□□□ -0.29
SMARCD2-207ENST00000578234 DEFB124Q8NES8 71 aa13.27□□□□□ -0.29
SMARCD2-207ENST00000578234 WBP2Q969T9 261 aa13.27□□□□□ -0.29
SMARCD2-207ENST00000578234 CCDC34Q96HJ3 373 aa13.27□□□□□ -0.29
SMARCD2-207ENST00000578234 GTPBP2Q9BX10 602 aaKnown RBP13.27□□□□□ -0.29
SMARCD2-207ENST00000578234 NUSAP1Q9BXS6 441 aaKnown RBP13.27□□□□□ -0.29
SMARCD2-207ENST00000578234 CYLDQ9NQC7 956 aa13.27□□□□□ -0.29
SMARCD2-207ENST00000578234 LMBRD1Q9NUN5 540 aa13.27□□□□□ -0.29
SMARCD2-207ENST00000578234 TRAF3IP3Q9Y228 551 aa13.27□□□□□ -0.29
SMARCD2-207ENST00000578234 STARD13Q9Y3M8 1113 aa13.27□□□□□ -0.29
SMARCD2-207ENST00000578234 ATXN2Q99700 1313 aaKnown RBP13.27□□□□□ -0.29
SMARCD2-207ENST00000578234 USP24Q9UPU5 2620 aa13.26□□□□□ -0.29
SMARCD2-207ENST00000578234 TCRBV21S2A2A0A5A6 115 aa13.26□□□□□ -0.29
SMARCD2-207ENST00000578234 C1QTNF9BB2RNN3 333 aa13.26□□□□□ -0.29
SMARCD2-207ENST00000578234 GREM1O60565 184 aa13.26□□□□□ -0.29
SMARCD2-207ENST00000578234 C1QTNF9P0C862 333 aa13.26□□□□□ -0.29
SMARCD2-207ENST00000578234 CEACAM1P13688 526 aa13.26□□□□□ -0.29
SMARCD2-207ENST00000578234 ATP5C1P36542 298 aaKnown RBP13.26□□□□□ -0.29
SMARCD2-207ENST00000578234 DPP6P42658 865 aa13.26□□□□□ -0.29
SMARCD2-207ENST00000578234 ASPAP45381 313 aa13.26□□□□□ -0.29
SMARCD2-207ENST00000578234 PGFP49763 221 aa13.26□□□□□ -0.29
SMARCD2-207ENST00000578234 MAP7D1Q3KQU3 841 aa13.26□□□□□ -0.29
SMARCD2-207ENST00000578234 SYT12Q8IV01 421 aa13.26□□□□□ -0.29
SMARCD2-207ENST00000578234 ASCC3Q8N3C0 2202 aaKnown RBP13.26□□□□□ -0.29
SMARCD2-207ENST00000578234 ZNF513Q8N8E2 541 aaPredicted RBP13.26□□□□□ -0.29
SMARCD2-207ENST00000578234 TERB1Q8NA31 727 aa13.26□□□□□ -0.29
SMARCD2-207ENST00000578234 HNRNPABQ99729 332 aaKnown RBP13.26□□□□□ -0.29
SMARCD2-207ENST00000578234 KLF16Q9BXK1 252 aaPredicted RBP13.26□□□□□ -0.29
SMARCD2-207ENST00000578234 HMGXB4Q9UGU5 601 aa13.26□□□□□ -0.29
SMARCD2-207ENST00000578234 MBD1Q9UIS9 605 aaPredicted RBP13.26□□□□□ -0.29
SMARCD2-207ENST00000578234 SCML2Q9UQR0 700 aa13.26□□□□□ -0.29
SMARCD2-207ENST00000578234 FRMD4BQ9Y2L6 1034 aa13.26□□□□□ -0.29
SMARCD2-207ENST00000578234 PLXND1Q9Y4D7 1925 aa13.26□□□□□ -0.29
SMARCD2-207ENST00000578234 CFAP47Q6ZTR5 3102 aa13.25□□□□□ -0.29
SMARCD2-207ENST00000578234 CEP295Q9C0D2 2601 aa13.25□□□□□ -0.29
SMARCD2-207ENST00000578234 HHLA1C9JL84 531 aa13.25□□□□□ -0.29
SMARCD2-207ENST00000578234 CALUO43852 315 aaPredicted RBP13.25□□□□□ -0.29
SMARCD2-207ENST00000578234 KIF20AO95235 890 aa13.25□□□□□ -0.29
SMARCD2-207ENST00000578234 TBX18O95935 607 aa13.25□□□□□ -0.29
SMARCD2-207ENST00000578234 HLA-DRAP01903 254 aa13.25□□□□□ -0.29
SMARCD2-207ENST00000578234 FAM200BP0CF97 657 aa13.25□□□□□ -0.29
SMARCD2-207ENST00000578234 CSRP1P21291 193 aaKnown RBP13.25□□□□□ -0.29
SMARCD2-207ENST00000578234 NTSR1P30989 418 aa13.25□□□□□ -0.29
SMARCD2-207ENST00000578234 PIK3CAP42336 1068 aa13.25□□□□□ -0.29
SMARCD2-207ENST00000578234 PTGER3P43115 390 aa13.25□□□□□ -0.29
SMARCD2-207ENST00000578234 VAMP7P51809 220 aa13.25□□□□□ -0.29
SMARCD2-207ENST00000578234 GOLGA8FQ08AF8 430 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms