RNA–Protein interactions for RNA: ENST00000578199.5

ERBB2-205, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-205ENST00000578199 PLEKHA5Q9HAU0 1116 aa18.26■□□□□ 0.51
ERBB2-205ENST00000578199 MFHAS1Q9Y4C4 1052 aa18.26■□□□□ 0.51
ERBB2-205ENST00000578199 ZBED1O96006 694 aa18.26■□□□□ 0.51
ERBB2-205ENST00000578199 IGFBP6P24592 240 aaPredicted RBP18.26■□□□□ 0.51
ERBB2-205ENST00000578199 PDK2Q15119 407 aa18.26■□□□□ 0.51
ERBB2-205ENST00000578199 SNCBQ16143 134 aa18.26■□□□□ 0.51
ERBB2-205ENST00000578199 NOTUMQ6P988 496 aa18.26■□□□□ 0.51
ERBB2-205ENST00000578199 ALKAL1Q6UXT8 129 aa18.26■□□□□ 0.51
ERBB2-205ENST00000578199 ZNF75CPQ92670 426 aaPredicted RBP18.26■□□□□ 0.51
ERBB2-205ENST00000578199 SERAC1Q96JX3 654 aa18.26■□□□□ 0.51
ERBB2-205ENST00000578199 BAIAP2L1Q9UHR4 511 aa18.26■□□□□ 0.51
ERBB2-205ENST00000578199 PIN4Q9Y237 131 aaKnown RBP18.26■□□□□ 0.51
ERBB2-205ENST00000578199 IGF2BP3O00425 579 aaKnown RBP eCLIP18.25■□□□□ 0.51
ERBB2-205ENST00000578199 DPYSL4O14531 572 aa18.25■□□□□ 0.51
ERBB2-205ENST00000578199 MGRN1O60291 552 aa18.25■□□□□ 0.51
ERBB2-205ENST00000578199 CYP2F1P24903 491 aa18.25■□□□□ 0.51
ERBB2-205ENST00000578199 GBP2P32456 591 aaPredicted RBP18.25■□□□□ 0.51
ERBB2-205ENST00000578199 SOX4Q06945 474 aaPredicted RBP18.25■□□□□ 0.51
ERBB2-205ENST00000578199 FAAP100Q0VG06 881 aa18.25■□□□□ 0.51
ERBB2-205ENST00000578199 STILQ15468 1287 aa18.25■□□□□ 0.51
ERBB2-205ENST00000578199 PYROXD2Q8N2H3 581 aa18.25■□□□□ 0.51
ERBB2-205ENST00000578199 TTC39CQ8N584 583 aa18.25■□□□□ 0.51
ERBB2-205ENST00000578199 GTF3C2Q8WUA4 911 aaPredicted RBP18.25■□□□□ 0.51
ERBB2-205ENST00000578199 ETNK1Q9HBU6 452 aa18.25■□□□□ 0.51
ERBB2-205ENST00000578199 MORF4L1Q9UBU8 362 aa18.25■□□□□ 0.51
ERBB2-205ENST00000578199 STARD13Q9Y3M8 1113 aa18.25■□□□□ 0.51
ERBB2-205ENST00000578199 SMIM28A0A1B0GU29 152 aa18.25■□□□□ 0.51
ERBB2-205ENST00000578199 EDF1O60869 148 aaKnown RBP18.25■□□□□ 0.51
ERBB2-205ENST00000578199 GNL1P36915 607 aaPredicted RBP18.25■□□□□ 0.51
ERBB2-205ENST00000578199 GTF2A2P52657 109 aa18.25■□□□□ 0.51
ERBB2-205ENST00000578199 PTK7Q13308 1070 aa18.25■□□□□ 0.51
ERBB2-205ENST00000578199 RASA2Q15283 850 aa18.25■□□□□ 0.51
ERBB2-205ENST00000578199 RNF43Q68DV7 783 aa18.25■□□□□ 0.51
ERBB2-205ENST00000578199 SLC9A4Q6AI14 798 aa18.25■□□□□ 0.51
ERBB2-205ENST00000578199 CCDC185Q8N715 623 aa18.25■□□□□ 0.51
ERBB2-205ENST00000578199 CYTH2Q99418 400 aa18.25■□□□□ 0.51
ERBB2-205ENST00000578199 MYLK2Q9H1R3 596 aa18.25■□□□□ 0.51
ERBB2-205ENST00000578199 SLC5A4Q9NY91 659 aa18.25■□□□□ 0.51
ERBB2-205ENST00000578199 TRIP12Q14669 1992 aaPredicted RBP18.25■□□□□ 0.51
ERBB2-205ENST00000578199 DOCK3Q8IZD9 2030 aa18.25■□□□□ 0.51
ERBB2-205ENST00000578199 TREHO43280 583 aa18.24■□□□□ 0.51
ERBB2-205ENST00000578199 HOXD8P13378 290 aaPredicted RBP18.24■□□□□ 0.51
ERBB2-205ENST00000578199 DARSP14868 501 aaKnown RBP18.24■□□□□ 0.51
ERBB2-205ENST00000578199 L1CAMP32004 1257 aa18.24■□□□□ 0.51
ERBB2-205ENST00000578199 SLC18A1P54219 525 aa18.24■□□□□ 0.51
ERBB2-205ENST00000578199 YWHAZP63104 245 aaKnown RBP18.24■□□□□ 0.51
ERBB2-205ENST00000578199 FBXO47Q5MNV8 452 aa18.24■□□□□ 0.51
ERBB2-205ENST00000578199 SMYD5Q6GMV2 418 aa18.24■□□□□ 0.51
ERBB2-205ENST00000578199 OTOAQ7RTW8 1153 aa18.24■□□□□ 0.51
ERBB2-205ENST00000578199 PLEKHH3Q7Z736 793 aa18.24■□□□□ 0.51
ERBB2-205ENST00000578199 BANPQ8N9N5 519 aa18.24■□□□□ 0.51
ERBB2-205ENST00000578199 SLC2A14Q8TDB8 520 aa18.24■□□□□ 0.51
ERBB2-205ENST00000578199 GRAMD1AQ96CP6 724 aa18.24■□□□□ 0.51
ERBB2-205ENST00000578199 KLHL29Q96CT2 875 aa18.24■□□□□ 0.51
ERBB2-205ENST00000578199 NRDE2Q9H7Z3 1164 aa18.24■□□□□ 0.51
ERBB2-205ENST00000578199 TMPRSS4Q9NRS4 437 aa18.24■□□□□ 0.51
ERBB2-205ENST00000578199 ETNK2Q9NVF9 386 aa18.24■□□□□ 0.51
ERBB2-205ENST00000578199 PAK5Q9P286 719 aa18.24■□□□□ 0.51
ERBB2-205ENST00000578199 CACNG4Q9UBN1 327 aa18.24■□□□□ 0.51
ERBB2-205ENST00000578199 CXorf49A8MYA2 514 aaPredicted RBP18.24■□□□□ 0.51
ERBB2-205ENST00000578199 KPNA7A9QM74 516 aa18.24■□□□□ 0.51
ERBB2-205ENST00000578199 METTL18O95568 372 aa18.24■□□□□ 0.51
ERBB2-205ENST00000578199 ATP2A2P16615 1042 aaKnown RBP18.24■□□□□ 0.51
ERBB2-205ENST00000578199 OVGP1Q12889 678 aa18.24■□□□□ 0.51
ERBB2-205ENST00000578199 SEPT7Q16181 437 aaKnown RBP18.24■□□□□ 0.51
ERBB2-205ENST00000578199 IQSEC1Q6DN90 963 aa18.24■□□□□ 0.51
ERBB2-205ENST00000578199 CAND1Q86VP6 1230 aaKnown RBP18.24■□□□□ 0.51
ERBB2-205ENST00000578199 PTPRN2Q92932 1015 aa18.24■□□□□ 0.51
ERBB2-205ENST00000578199 PHACTR1Q9C0D0 580 aa18.24■□□□□ 0.51
ERBB2-205ENST00000578199 PPCSQ9HAB8 311 aa18.24■□□□□ 0.51
ERBB2-205ENST00000578199 CNTN3Q9P232 1028 aa18.24■□□□□ 0.51
ERBB2-205ENST00000578199 STK38LQ9Y2H1 464 aa18.24■□□□□ 0.51
ERBB2-205ENST00000578199 RRN3P2A6NIE6 340 aa18.23■□□□□ 0.51
ERBB2-205ENST00000578199 A8MUI8 341 aa18.23■□□□□ 0.51
ERBB2-205ENST00000578199 CHADO15335 359 aa18.23■□□□□ 0.51
ERBB2-205ENST00000578199 ATP6V1G2O95670 118 aa18.23■□□□□ 0.51
ERBB2-205ENST00000578199 KRT16P08779 473 aa18.23■□□□□ 0.51
ERBB2-205ENST00000578199 NQO1P15559 274 aaKnown RBP18.23■□□□□ 0.51
ERBB2-205ENST00000578199 TGM2P21980 687 aa18.23■□□□□ 0.51
ERBB2-205ENST00000578199 GRIA1P42261 906 aa18.23■□□□□ 0.51
ERBB2-205ENST00000578199 GTF2A1P52655 376 aaPredicted RBP18.23■□□□□ 0.51
ERBB2-205ENST00000578199 CTAGE3PQ8IX95 158 aa18.23■□□□□ 0.51
ERBB2-205ENST00000578199 ZNF276Q8N554 614 aa18.23■□□□□ 0.51
ERBB2-205ENST00000578199 LRRC52Q8N7C0 313 aa18.23■□□□□ 0.51
ERBB2-205ENST00000578199 UPF1Q92900 1129 aaKnown RBP eCLIP18.23■□□□□ 0.515e-6■□□□□ 8.7
ERBB2-205ENST00000578199 FETUBQ9UGM5 382 aa18.23■□□□□ 0.51
ERBB2-205ENST00000578199 CHKBQ9Y259 395 aa18.23■□□□□ 0.51
ERBB2-205ENST00000578199 DERAQ9Y315 318 aa18.23■□□□□ 0.51
ERBB2-205ENST00000578199 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.23■□□□□ 0.51
ERBB2-205ENST00000578199 SYNJ2BP-COX16A0A087WUM0 186 aa18.23■□□□□ 0.51
ERBB2-205ENST00000578199 GLTPD2A6NH11 291 aa18.23■□□□□ 0.51
ERBB2-205ENST00000578199 MT-ND3P03897 115 aa18.23■□□□□ 0.51
ERBB2-205ENST00000578199 RABGGTBP53611 331 aa18.23■□□□□ 0.51
ERBB2-205ENST00000578199 CEP57Q86XR8 500 aa18.23■□□□□ 0.51
ERBB2-205ENST00000578199 PPM1NQ8N819 430 aa18.23■□□□□ 0.51
ERBB2-205ENST00000578199 ARRDC4Q8NCT1 418 aa18.23■□□□□ 0.51
ERBB2-205ENST00000578199 TEKT4Q8WW24 435 aa18.23■□□□□ 0.51
ERBB2-205ENST00000578199 ERP27Q96DN0 273 aa18.23■□□□□ 0.51
ERBB2-205ENST00000578199 TBC1D31Q96DN5 1066 aa18.23■□□□□ 0.51
ERBB2-205ENST00000578199 PLAC1Q9HBJ0 212 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms