RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 TTLL2Q9BWV7 592 aa16.93■□□□□ 0.3
VAPA-204ENST00000577901 NT5C1AQ9BXI3 368 aa16.93■□□□□ 0.3
VAPA-204ENST00000577901 FAM124BQ9H5Z6 455 aaPredicted RBP16.93■□□□□ 0.3
VAPA-204ENST00000577901 MMP17Q9ULZ9 603 aa16.93■□□□□ 0.3
VAPA-204ENST00000577901 FRYQ5TBA9 3013 aa16.93■□□□□ 0.3
VAPA-204ENST00000577901 SDK1Q7Z5N4 2213 aa16.92■□□□□ 0.3
VAPA-204ENST00000577901 LNP1A1A4G5 178 aa16.92■□□□□ 0.3
VAPA-204ENST00000577901 ANTXRLA6NF34 631 aa16.92■□□□□ 0.3
VAPA-204ENST00000577901 C4orf47A7E2U8 309 aa16.92■□□□□ 0.3
VAPA-204ENST00000577901 ABL1P00519 1130 aa16.92■□□□□ 0.3
VAPA-204ENST00000577901 PPP3CCP48454 512 aa16.92■□□□□ 0.3
VAPA-204ENST00000577901 SLC7A9P82251 487 aa16.92■□□□□ 0.3
VAPA-204ENST00000577901 KCNH2Q12809 1159 aa16.92■□□□□ 0.3
VAPA-204ENST00000577901 DPCR1Q3MIW9 517 aa16.92■□□□□ 0.3
VAPA-204ENST00000577901 TRIM59Q8IWR1 403 aa16.92■□□□□ 0.3
VAPA-204ENST00000577901 ADGRG2Q8IZP9 1017 aa16.92■□□□□ 0.3
VAPA-204ENST00000577901 TATDN2Q93075 761 aa16.92■□□□□ 0.3
VAPA-204ENST00000577901 CNOT6LQ96LI5 555 aaKnown RBP16.92■□□□□ 0.3
VAPA-204ENST00000577901 C8orf48Q96LL4 319 aa16.92■□□□□ 0.3
VAPA-204ENST00000577901 ZNF518BQ9C0D4 1074 aa16.92■□□□□ 0.3
VAPA-204ENST00000577901 RNF38Q9H0F5 515 aa16.92■□□□□ 0.3
VAPA-204ENST00000577901 ANAPC1Q9H1A4 1944 aa16.92■□□□□ 0.3
VAPA-204ENST00000577901 MYO16Q9Y6X6 1858 aa16.91■□□□□ 0.3
VAPA-204ENST00000577901 F8VP50 259 aa16.91■□□□□ 0.3
VAPA-204ENST00000577901 CLDN5O00501 218 aa16.91■□□□□ 0.3
VAPA-204ENST00000577901 KHNYNO15037 678 aaKnown RBP16.91■□□□□ 0.3
VAPA-204ENST00000577901 CILPO75339 1184 aa16.91■□□□□ 0.3
VAPA-204ENST00000577901 OLFM2O95897 454 aa16.91■□□□□ 0.3
VAPA-204ENST00000577901 AFPP02771 609 aaKnown RBP16.91■□□□□ 0.3
VAPA-204ENST00000577901 CYP17A1P05093 508 aa16.91■□□□□ 0.3
VAPA-204ENST00000577901 BCKDHBP21953 392 aa16.91■□□□□ 0.3
VAPA-204ENST00000577901 NOVA1P51513 510 aaKnown RBP16.91■□□□□ 0.3
VAPA-204ENST00000577901 MRPS21P82921 87 aaKnown RBP16.91■□□□□ 0.3
VAPA-204ENST00000577901 ORC1Q13415 861 aa16.91■□□□□ 0.3
VAPA-204ENST00000577901 DHCR24Q15392 516 aa16.91■□□□□ 0.3
VAPA-204ENST00000577901 CRY1Q16526 586 aa16.91■□□□□ 0.3
VAPA-204ENST00000577901 DAB2IPQ5VWQ8 1189 aa16.91■□□□□ 0.3
VAPA-204ENST00000577901 CYP2U1Q7Z449 544 aa16.91■□□□□ 0.3
VAPA-204ENST00000577901 TTC30AQ86WT1 665 aa16.91■□□□□ 0.3
VAPA-204ENST00000577901 KIAA1958Q8N8K9 716 aa16.91■□□□□ 0.3
VAPA-204ENST00000577901 MDGA1Q8NFP4 955 aa16.91■□□□□ 0.3
VAPA-204ENST00000577901 SMARCD1Q96GM5 515 aa16.91■□□□□ 0.3
VAPA-204ENST00000577901 SMPD4Q9NXE4 827 aa16.91■□□□□ 0.3
VAPA-204ENST00000577901 CPQQ9Y646 472 aa16.91■□□□□ 0.3
VAPA-204ENST00000577901 HELZP42694 1942 aaKnown RBP16.9■□□□□ 0.3
VAPA-204ENST00000577901 SLC9A3R1O14745 358 aaPredicted RBP16.9■□□□□ 0.3
VAPA-204ENST00000577901 SCAMP3O14828 347 aaKnown RBP16.9■□□□□ 0.3
VAPA-204ENST00000577901 OAS1P00973 400 aaKnown RBP16.9■□□□□ 0.3
VAPA-204ENST00000577901 TBXAS1P24557 533 aaPredicted RBP16.9■□□□□ 0.3
VAPA-204ENST00000577901 SLC6A11P48066 632 aa16.9■□□□□ 0.3
VAPA-204ENST00000577901 YWHAEP62258 255 aaKnown RBP16.9■□□□□ 0.3
VAPA-204ENST00000577901 TAF10Q12962 218 aa16.9■□□□□ 0.3
VAPA-204ENST00000577901 CUL2Q13617 745 aa16.9■□□□□ 0.3
VAPA-204ENST00000577901 SASS6Q6UVJ0 657 aa16.9■□□□□ 0.3
VAPA-204ENST00000577901 TMEM92Q6UXU6 159 aa16.9■□□□□ 0.3
VAPA-204ENST00000577901 FAM114A1Q8IWE2 563 aa16.9■□□□□ 0.3
VAPA-204ENST00000577901 FUKQ8N0W3 1084 aa16.9■□□□□ 0.3
VAPA-204ENST00000577901 C12orf29Q8N999 325 aa16.9■□□□□ 0.3
VAPA-204ENST00000577901 SLC2A14Q8TDB8 520 aa16.9■□□□□ 0.3
VAPA-204ENST00000577901 NT5C1BQ96P26 610 aa16.9■□□□□ 0.3
VAPA-204ENST00000577901 MED15Q96RN5 788 aa16.9■□□□□ 0.3
VAPA-204ENST00000577901 PNKPQ96T60 521 aa16.9■□□□□ 0.3
VAPA-204ENST00000577901 THAP9Q9H5L6 903 aa16.9■□□□□ 0.3
VAPA-204ENST00000577901 TMEM9BQ9NQ34 198 aa16.9■□□□□ 0.3
VAPA-204ENST00000577901 CISHQ9NSE2 258 aa16.9■□□□□ 0.3
VAPA-204ENST00000577901 CFAP97Q9P2B7 532 aa16.9■□□□□ 0.3
VAPA-204ENST00000577901 HMGXB4Q9UGU5 601 aa16.9■□□□□ 0.3
VAPA-204ENST00000577901 ASPMQ8IZT6 3477 aa16.9■□□□□ 0.3
VAPA-204ENST00000577901 PATE3B3GLJ2 98 aa16.89■□□□□ 0.29
VAPA-204ENST00000577901 GIPC1O14908 333 aa16.89■□□□□ 0.29
VAPA-204ENST00000577901 ALDH1A2O94788 518 aa16.89■□□□□ 0.29
VAPA-204ENST00000577901 CCDC130P13994 396 aa16.89■□□□□ 0.29
VAPA-204ENST00000577901 CACNA2D1P54289 1103 aa16.89■□□□□ 0.29
VAPA-204ENST00000577901 LRMPQ12912 555 aa16.89■□□□□ 0.29
VAPA-204ENST00000577901 ZNF394Q53GI3 561 aa16.89■□□□□ 0.29
VAPA-204ENST00000577901 RBM43Q6ZSC3 357 aaKnown RBP16.89■□□□□ 0.29
VAPA-204ENST00000577901 PAQR9Q6ZVX9 377 aa16.89■□□□□ 0.29
VAPA-204ENST00000577901 FAM35AQ86V20 835 aa16.89■□□□□ 0.29
VAPA-204ENST00000577901 SFTPA1Q8IWL2 248 aa16.89■□□□□ 0.29
VAPA-204ENST00000577901 NUP93Q8N1F7 819 aa16.89■□□□□ 0.29
VAPA-204ENST00000577901 ALLCQ8N6M5 410 aa16.89■□□□□ 0.29
VAPA-204ENST00000577901 EHBP1Q8NDI1 1231 aa16.89■□□□□ 0.29
VAPA-204ENST00000577901 OLIG1Q8TAK6 271 aa16.89■□□□□ 0.29
VAPA-204ENST00000577901 WHAMMQ8TF30 809 aa16.89■□□□□ 0.29
VAPA-204ENST00000577901 CYFIP2Q96F07 1278 aa16.89■□□□□ 0.29
VAPA-204ENST00000577901 TMEM176AQ96HP8 235 aa16.89■□□□□ 0.29
VAPA-204ENST00000577901 HEXIM2Q96MH2 286 aaKnown RBP16.89■□□□□ 0.29
VAPA-204ENST00000577901 SLITRK1Q96PX8 696 aa16.89■□□□□ 0.29
VAPA-204ENST00000577901 TWNKQ96RR1 684 aa16.89■□□□□ 0.29
VAPA-204ENST00000577901 HNRNPABQ99729 332 aaKnown RBP16.89■□□□□ 0.29
VAPA-204ENST00000577901 DMAP1Q9NPF5 467 aaPredicted RBP16.89■□□□□ 0.29
VAPA-204ENST00000577901 FAM49BQ9NUQ9 324 aa16.89■□□□□ 0.29
VAPA-204ENST00000577901 AP1G2O75843 785 aa16.88■□□□□ 0.29
VAPA-204ENST00000577901 RTN3O95197 1032 aaPredicted RBP16.88■□□□□ 0.29
VAPA-204ENST00000577901 KAT7O95251 611 aa16.88■□□□□ 0.29
VAPA-204ENST00000577901 KLF8O95600 359 aaPredicted RBP16.88■□□□□ 0.29
VAPA-204ENST00000577901 ADH1CP00326 375 aa16.88■□□□□ 0.29
VAPA-204ENST00000577901 APODP05090 189 aa16.88■□□□□ 0.29
VAPA-204ENST00000577901 PROS1P07225 676 aa16.88■□□□□ 0.29
VAPA-204ENST00000577901 FAM200BP0CF97 657 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms