RNA–Protein interactions for RNA: ENST00000577730.5

CDH8-205, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 8,009 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-205ENST00000577730 ZNF556Q9HAH1 456 aa4.56□□□□□ -1.68
CDH8-205ENST00000577730 ZMYM2Q9UBW7 1377 aa4.56□□□□□ -1.68
CDH8-205ENST00000577730 CPSF1Q10570 1443 aaKnown RBP4.56□□□□□ -1.68
CDH8-205ENST00000577730 IL6P05231 212 aa4.56□□□□□ -1.68
CDH8-205ENST00000577730 COX4I1P13073 169 aa4.56□□□□□ -1.68
CDH8-205ENST00000577730 NT5C2P49902 561 aa4.56□□□□□ -1.68
CDH8-205ENST00000577730 POU5F1BQ06416 359 aa4.56□□□□□ -1.68
CDH8-205ENST00000577730 IL18R1Q13478 541 aa4.56□□□□□ -1.68
CDH8-205ENST00000577730 STYK1Q6J9G0 422 aa4.56□□□□□ -1.68
CDH8-205ENST00000577730 EIF3MQ7L2H7 374 aaKnown RBP4.56□□□□□ -1.68
CDH8-205ENST00000577730 TBCKQ8TEA7 893 aa4.56□□□□□ -1.68
CDH8-205ENST00000577730 SRPK1Q96SB4 655 aaKnown RBP4.56□□□□□ -1.68
CDH8-205ENST00000577730 OR2B2Q9GZK3 357 aa4.56□□□□□ -1.68
CDH8-205ENST00000577730 ZNF277Q9NRM2 450 aaPredicted RBP4.56□□□□□ -1.68
CDH8-205ENST00000577730 NAGPAQ9UK23 515 aa4.56□□□□□ -1.68
CDH8-205ENST00000577730 CDV3Q9UKY7 258 aaKnown RBP4.56□□□□□ -1.68
CDH8-205ENST00000577730 N6AMT1Q9Y5N5 214 aa4.56□□□□□ -1.68
CDH8-205ENST00000577730 A0A087X0T9 212 aa4.56□□□□□ -1.68
CDH8-205ENST00000577730 SNAP23O00161 211 aa4.56□□□□□ -1.68
CDH8-205ENST00000577730 UFL1O94874 794 aa4.56□□□□□ -1.68
CDH8-205ENST00000577730 PABPC4LP0CB38 370 aaKnown RBP4.56□□□□□ -1.68
CDH8-205ENST00000577730 CHRNB1P11230 501 aa4.56□□□□□ -1.68
CDH8-205ENST00000577730 SPRP35270 261 aaPredicted RBP4.56□□□□□ -1.68
CDH8-205ENST00000577730 TRIM32Q13049 653 aa4.56□□□□□ -1.68
CDH8-205ENST00000577730 ZBED5Q49AG3 693 aa4.56□□□□□ -1.68
CDH8-205ENST00000577730 SAMD4BQ5PRF9 694 aaKnown RBP4.56□□□□□ -1.68
CDH8-205ENST00000577730 PALB2Q86YC2 1186 aa4.56□□□□□ -1.68
CDH8-205ENST00000577730 ARMC8Q8IUR7 673 aa4.56□□□□□ -1.68
CDH8-205ENST00000577730 OSBP2Q969R2 916 aa4.56□□□□□ -1.68
CDH8-205ENST00000577730 TP53INP1Q96A56 240 aa4.56□□□□□ -1.68
CDH8-205ENST00000577730 MNTQ99583 582 aa4.56□□□□□ -1.68
CDH8-205ENST00000577730 HGH1Q9BTY7 390 aa4.56□□□□□ -1.68
CDH8-205ENST00000577730 TMEM109Q9BVC6 243 aa4.56□□□□□ -1.68
CDH8-205ENST00000577730 TRIM9Q9C026 710 aa4.56□□□□□ -1.68
CDH8-205ENST00000577730 WDR41Q9HAD4 459 aa4.56□□□□□ -1.68
CDH8-205ENST00000577730 CCNB1IP1Q9NPC3 277 aa4.56□□□□□ -1.68
CDH8-205ENST00000577730 MKLN1Q9UL63 735 aa4.56□□□□□ -1.68
CDH8-205ENST00000577730 EDARQ9UNE0 448 aa4.56□□□□□ -1.68
CDH8-205ENST00000577730 ZNF652Q9Y2D9 606 aa4.56□□□□□ -1.68
CDH8-205ENST00000577730 GPR75-ASB3A0A0A6YYF3 556 aa4.56□□□□□ -1.68
CDH8-205ENST00000577730 K7EPI3 171 aa4.56□□□□□ -1.68
CDH8-205ENST00000577730 TFECO14948 347 aaPredicted RBP4.56□□□□□ -1.68
CDH8-205ENST00000577730 EFCAB14O75071 495 aa4.56□□□□□ -1.68
CDH8-205ENST00000577730 P4HBP07237 508 aaKnown RBP4.56□□□□□ -1.68
CDH8-205ENST00000577730 PRKAR1AP10644 381 aa4.56□□□□□ -1.68
CDH8-205ENST00000577730 XPAP23025 273 aaPredicted RBP4.56□□□□□ -1.68
CDH8-205ENST00000577730 NME5P56597 212 aa4.56□□□□□ -1.68
CDH8-205ENST00000577730 RPL10AP62906 217 aaKnown RBP4.56□□□□□ -1.68
CDH8-205ENST00000577730 BNIP3Q12983 259 aa4.56□□□□□ -1.68
CDH8-205ENST00000577730 ALCAMQ13740 583 aa4.56□□□□□ -1.68
CDH8-205ENST00000577730 PTPAQ15257 358 aa4.56□□□□□ -1.68
CDH8-205ENST00000577730 SEL1L3Q68CR1 1132 aa4.56□□□□□ -1.68
CDH8-205ENST00000577730 CYP2R1Q6VVX0 501 aa4.56□□□□□ -1.68
CDH8-205ENST00000577730 KRT28Q7Z3Y7 464 aa4.56□□□□□ -1.68
CDH8-205ENST00000577730 OR8H3Q8N146 312 aa4.56□□□□□ -1.68
CDH8-205ENST00000577730 RNF148Q8N7C7 305 aa4.56□□□□□ -1.68
CDH8-205ENST00000577730 TPK1Q9H3S4 243 aa4.56□□□□□ -1.68
CDH8-205ENST00000577730 TOR3AQ9H497 397 aa4.56□□□□□ -1.68
CDH8-205ENST00000577730 PCIF1Q9H4Z3 704 aa4.56□□□□□ -1.68
CDH8-205ENST00000577730 TASP1Q9H6P5 420 aa4.56□□□□□ -1.68
CDH8-205ENST00000577730 ASB3Q9Y575 518 aa4.56□□□□□ -1.68
CDH8-205ENST00000577730 A2MP01023 1474 aa4.55□□□□□ -1.68
CDH8-205ENST00000577730 H7C2Y5 167 aa4.55□□□□□ -1.68
CDH8-205ENST00000577730 MRASO14807 208 aa4.55□□□□□ -1.68
CDH8-205ENST00000577730 SERPINA6P08185 405 aa4.55□□□□□ -1.68
CDH8-205ENST00000577730 IL4RP24394 825 aa4.55□□□□□ -1.68
CDH8-205ENST00000577730 SOX11P35716 441 aa4.55□□□□□ -1.68
CDH8-205ENST00000577730 LIG4P49917 911 aa4.55□□□□□ -1.68
CDH8-205ENST00000577730 NEK3P51956 506 aa4.55□□□□□ -1.68
CDH8-205ENST00000577730 KCNQ4P56696 695 aa4.55□□□□□ -1.68
CDH8-205ENST00000577730 TIGD2Q4W5G0 525 aa4.55□□□□□ -1.68
CDH8-205ENST00000577730 ACSBG2Q5FVE4 666 aa4.55□□□□□ -1.68
CDH8-205ENST00000577730 USPL1Q5W0Q7 1092 aa4.55□□□□□ -1.68
CDH8-205ENST00000577730 DPY19L2Q6NUT2 758 aa4.55□□□□□ -1.68
CDH8-205ENST00000577730 RFWD3Q6PCD5 774 aa4.55□□□□□ -1.68
CDH8-205ENST00000577730 CRTC3Q6UUV7 619 aa4.55□□□□□ -1.68
CDH8-205ENST00000577730 LRRC8DQ7L1W4 858 aa4.55□□□□□ -1.68
CDH8-205ENST00000577730 OTOAQ7RTW8 1153 aa4.55□□□□□ -1.68
CDH8-205ENST00000577730 BRSK2Q8IWQ3 736 aa4.55□□□□□ -1.68
CDH8-205ENST00000577730 IRGQQ8WZA9 623 aa4.55□□□□□ -1.68
CDH8-205ENST00000577730 ZNF594Q96JF6 807 aaPredicted RBP4.55□□□□□ -1.68
CDH8-205ENST00000577730 NEK6Q9HC98 313 aa4.55□□□□□ -1.68
CDH8-205ENST00000577730 ZFYVE28Q9HCC9 887 aa4.55□□□□□ -1.68
CDH8-205ENST00000577730 GPRC5DQ9NZD1 345 aa4.55□□□□□ -1.68
CDH8-205ENST00000577730 FAM8A1Q9UBU6 413 aa4.55□□□□□ -1.68
CDH8-205ENST00000577730 HESX1Q9UBX0 185 aa4.55□□□□□ -1.68
CDH8-205ENST00000577730 CHORDC1Q9UHD1 332 aaPredicted RBP4.55□□□□□ -1.68
CDH8-205ENST00000577730 PEX16Q9Y5Y5 336 aa4.55□□□□□ -1.68
CDH8-205ENST00000577730 C12orf71A8MTZ7 269 aa4.55□□□□□ -1.68
CDH8-205ENST00000577730 PTGES3LE9PB15 166 aa4.55□□□□□ -1.68
CDH8-205ENST00000577730 KATNA1O75449 491 aa4.55□□□□□ -1.68
CDH8-205ENST00000577730 IFNA7P01567 189 aa4.55□□□□□ -1.68
CDH8-205ENST00000577730 MYL4P12829 197 aa4.55□□□□□ -1.68
CDH8-205ENST00000577730 PAMP19021 973 aa4.55□□□□□ -1.68
CDH8-205ENST00000577730 SLC9A1P19634 815 aa4.55□□□□□ -1.68
CDH8-205ENST00000577730 HADHAP40939 763 aa4.55□□□□□ -1.68
CDH8-205ENST00000577730 PHKA2P46019 1235 aa4.55□□□□□ -1.68
CDH8-205ENST00000577730 ORC2Q13416 577 aaPredicted RBP4.55□□□□□ -1.68
CDH8-205ENST00000577730 CYP51A1Q16850 503 aa4.55□□□□□ -1.68
CDH8-205ENST00000577730 HSD17B12Q53GQ0 312 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms