RNA–Protein interactions for RNA: ENST00000577706.1

TOP2A-203, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-203ENST00000577706 PIK3CBP42338 1070 aa4.27□□□□□ -1.73
TOP2A-203ENST00000577706 ZNF813Q6ZN06 617 aa4.27□□□□□ -1.73
TOP2A-203ENST00000577706 RNF44Q7L0R7 432 aa4.27□□□□□ -1.73
TOP2A-203ENST00000577706 DGKHQ86XP1 1220 aa4.27□□□□□ -1.73
TOP2A-203ENST00000577706 SDR16C5Q8N3Y7 309 aa4.27□□□□□ -1.73
TOP2A-203ENST00000577706 LINC01465Q8N7H1 131 aa4.27□□□□□ -1.73
TOP2A-203ENST00000577706 MAFAQ8NHW3 353 aaPredicted RBP4.27□□□□□ -1.73
TOP2A-203ENST00000577706 ZNF398Q8TD17 642 aa4.27□□□□□ -1.73
TOP2A-203ENST00000577706 PNISRQ8TF01 805 aaKnown RBP4.27□□□□□ -1.73
TOP2A-203ENST00000577706 ZC3H10Q96K80 434 aaKnown RBP4.27□□□□□ -1.73
TOP2A-203ENST00000577706 BTBD1Q9H0C5 482 aa4.27□□□□□ -1.73
TOP2A-203ENST00000577706 TRIM36Q9NQ86 728 aa4.27□□□□□ -1.73
TOP2A-203ENST00000577706 DDX21Q9NR30 783 aaKnown RBP eCLIP4.27□□□□□ -1.73
TOP2A-203ENST00000577706 SNX15Q9NRS6 342 aa4.27□□□□□ -1.73
TOP2A-203ENST00000577706 DNAJB11Q9UBS4 358 aa4.27□□□□□ -1.73
TOP2A-203ENST00000577706 VPS51Q9UID3 782 aa4.27□□□□□ -1.73
TOP2A-203ENST00000577706 CORO2BQ9UQ03 480 aa4.27□□□□□ -1.73
TOP2A-203ENST00000577706 HPSEQ9Y251 543 aa4.27□□□□□ -1.73
TOP2A-203ENST00000577706 SLC27A6Q9Y2P4 619 aa4.27□□□□□ -1.73
TOP2A-203ENST00000577706 RHPN2P1A8MT19 583 aa4.26□□□□□ -1.73
TOP2A-203ENST00000577706 TMEM232C9JQI7 657 aa4.26□□□□□ -1.73
TOP2A-203ENST00000577706 H3BNC9 293 aa4.26□□□□□ -1.73
TOP2A-203ENST00000577706 TRIM38O00635 465 aa4.26□□□□□ -1.73
TOP2A-203ENST00000577706 PPM1GO15355 546 aaPredicted RBP4.26□□□□□ -1.73
TOP2A-203ENST00000577706 PQBP1O60828 265 aaKnown RBP4.26□□□□□ -1.73
TOP2A-203ENST00000577706 MOSPD3O75425 235 aa4.26□□□□□ -1.73
TOP2A-203ENST00000577706 INMTO95050 263 aa4.26□□□□□ -1.73
TOP2A-203ENST00000577706 TOP3BO95985 862 aaKnown RBP4.26□□□□□ -1.73
TOP2A-203ENST00000577706 ANXA2P07355 339 aaKnown RBP4.26□□□□□ -1.73
TOP2A-203ENST00000577706 HMGB1P09429 215 aaKnown RBP4.26□□□□□ -1.73
TOP2A-203ENST00000577706 CD19P15391 556 aa4.26□□□□□ -1.73
TOP2A-203ENST00000577706 PHKG2P15735 406 aa4.26□□□□□ -1.73
TOP2A-203ENST00000577706 RPL17P18621 184 aaKnown RBP4.26□□□□□ -1.73
TOP2A-203ENST00000577706 ATP5F1P24539 256 aaPredicted RBP4.26□□□□□ -1.73
TOP2A-203ENST00000577706 YY1P25490 414 aa4.26□□□□□ -1.73
TOP2A-203ENST00000577706 CFHR3Q02985 330 aa4.26□□□□□ -1.73
TOP2A-203ENST00000577706 SEC23BQ15437 767 aa4.26□□□□□ -1.73
TOP2A-203ENST00000577706 KLHDC7AQ5VTJ3 777 aa4.26□□□□□ -1.73
TOP2A-203ENST00000577706 TMEM65Q6PI78 240 aa4.26□□□□□ -1.73
TOP2A-203ENST00000577706 RANBP10Q6VN20 620 aa4.26□□□□□ -1.73
TOP2A-203ENST00000577706 KRT78Q8N1N4 520 aa4.26□□□□□ -1.73
TOP2A-203ENST00000577706 C12orf76Q8N812 135 aaPredicted RBP4.26□□□□□ -1.73
TOP2A-203ENST00000577706 DENND1AQ8TEH3 1009 aa4.26□□□□□ -1.73
TOP2A-203ENST00000577706 IPCEF1Q8WWN9 437 aaPredicted RBP4.26□□□□□ -1.73
TOP2A-203ENST00000577706 EDC3Q96F86 508 aaKnown RBP4.26□□□□□ -1.73
TOP2A-203ENST00000577706 PRR11Q96HE9 360 aaPredicted RBP4.26□□□□□ -1.73
TOP2A-203ENST00000577706 KAZALD1Q96I82 304 aa4.26□□□□□ -1.73
TOP2A-203ENST00000577706 SELENOOQ9BVL4 669 aa4.26□□□□□ -1.73
TOP2A-203ENST00000577706 KRTAP2-2Q9BYT5 123 aa4.26□□□□□ -1.73
TOP2A-203ENST00000577706 UNKQ9C0B0 810 aaKnown RBP4.26□□□□□ -1.73
TOP2A-203ENST00000577706 METTL14Q9HCE5 456 aaKnown RBP4.26□□□□□ -1.73
TOP2A-203ENST00000577706 A8MVJ9 347 aa4.25□□□□□ -1.73
TOP2A-203ENST00000577706 CLIC1O00299 241 aa4.25□□□□□ -1.73
TOP2A-203ENST00000577706 CA12O43570 354 aa4.25□□□□□ -1.73
TOP2A-203ENST00000577706 TMPRSS11DO60235 418 aa4.25□□□□□ -1.73
TOP2A-203ENST00000577706 SNX2O60749 519 aa4.25□□□□□ -1.73
TOP2A-203ENST00000577706 IL18RAPO95256 599 aa4.25□□□□□ -1.73
TOP2A-203ENST00000577706 PARNO95453 639 aaKnown RBP4.25□□□□□ -1.73
TOP2A-203ENST00000577706 MMP13P45452 471 aa4.25□□□□□ -1.73
TOP2A-203ENST00000577706 COPAP53621 1224 aa4.25□□□□□ -1.73
TOP2A-203ENST00000577706 EIF4A1P60842 406 aaKnown RBP4.25□□□□□ -1.73
TOP2A-203ENST00000577706 DAG1Q14118 895 aa4.25□□□□□ -1.73
TOP2A-203ENST00000577706 ZNF268Q14587 947 aaPredicted RBP4.25□□□□□ -1.73
TOP2A-203ENST00000577706 LARS2Q15031 903 aaKnown RBP4.25□□□□□ -1.73
TOP2A-203ENST00000577706 Q4G0T1 1027 aa4.25□□□□□ -1.73
TOP2A-203ENST00000577706 MEX3CQ5U5Q3 659 aaKnown RBP4.25□□□□□ -1.73
TOP2A-203ENST00000577706 DENND2CQ68D51 928 aa4.25□□□□□ -1.73
TOP2A-203ENST00000577706 GRHL2Q6ISB3 625 aa4.25□□□□□ -1.73
TOP2A-203ENST00000577706 DCDC5Q6ZRR9 648 aa4.25□□□□□ -1.73
TOP2A-203ENST00000577706 ZDHHC12Q96GR4 267 aa4.25□□□□□ -1.73
TOP2A-203ENST00000577706 ZNF668Q96K58 619 aaPredicted RBP4.25□□□□□ -1.73
TOP2A-203ENST00000577706 FAM227BQ96M60 508 aa4.25□□□□□ -1.73
TOP2A-203ENST00000577706 USP29Q9HBJ7 922 aa4.25□□□□□ -1.73
TOP2A-203ENST00000577706 GJB4Q9NTQ9 266 aa4.25□□□□□ -1.73
TOP2A-203ENST00000577706 GAR1Q9NY12 217 aaKnown RBP4.25□□□□□ -1.73
TOP2A-203ENST00000577706 STEAP1Q9UHE8 339 aa4.25□□□□□ -1.73
TOP2A-203ENST00000577706 FAM50BQ9Y247 325 aa4.25□□□□□ -1.73
TOP2A-203ENST00000577706 ZNF521Q96K83 1311 aa4.24□□□□□ -1.73
TOP2A-203ENST00000577706 A0A087WZ62 844 aa4.24□□□□□ -1.73
TOP2A-203ENST00000577706 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.24□□□□□ -1.73
TOP2A-203ENST00000577706 E5RJQ4 531 aa4.24□□□□□ -1.73
TOP2A-203ENST00000577706 PPEF2O14830 753 aa4.24□□□□□ -1.73
TOP2A-203ENST00000577706 DSCR3O14972 297 aa4.24□□□□□ -1.73
TOP2A-203ENST00000577706 FYB1O15117 783 aa4.24□□□□□ -1.73
TOP2A-203ENST00000577706 KPNA5O15131 536 aa4.24□□□□□ -1.73
TOP2A-203ENST00000577706 CBSLP0DN79 551 aa4.24□□□□□ -1.73
TOP2A-203ENST00000577706 ADRA1DP25100 572 aa4.24□□□□□ -1.73
TOP2A-203ENST00000577706 ATICP31939 592 aa4.24□□□□□ -1.73
TOP2A-203ENST00000577706 HTR7P34969 479 aa4.24□□□□□ -1.73
TOP2A-203ENST00000577706 CBSP35520 551 aa4.24□□□□□ -1.73
TOP2A-203ENST00000577706 GPC5P78333 572 aa4.24□□□□□ -1.73
TOP2A-203ENST00000577706 ZNF543Q08ER8 600 aa4.24□□□□□ -1.73
TOP2A-203ENST00000577706 MFSD13AQ14CX5 517 aa4.24□□□□□ -1.73
TOP2A-203ENST00000577706 RABEP1Q15276 862 aa4.24□□□□□ -1.73
TOP2A-203ENST00000577706 TRIP6Q15654 476 aaKnown RBP4.24□□□□□ -1.73
TOP2A-203ENST00000577706 C4orf46Q504U0 113 aa4.24□□□□□ -1.73
TOP2A-203ENST00000577706 MZT2AQ6P582 158 aa4.24□□□□□ -1.73
TOP2A-203ENST00000577706 CRELD2Q6UXH1 353 aaPredicted RBP4.24□□□□□ -1.73
TOP2A-203ENST00000577706 LIX1LQ8IVB5 337 aa4.24□□□□□ -1.73
TOP2A-203ENST00000577706 PNPLA1Q8N8W4 532 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms