RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 C3orf58Q8NDZ4 430 aa14.39□□□□□ -0.11
RNF43-202ENST00000577625 SLC35F5Q8WV83 523 aa14.39□□□□□ -0.11
RNF43-202ENST00000577625 UBLCP1Q8WVY7 318 aaPredicted RBP14.39□□□□□ -0.11
RNF43-202ENST00000577625 PIWIL1Q96J94 861 aaKnown RBP14.39□□□□□ -0.11
RNF43-202ENST00000577625 RSAD1Q9HA92 442 aa14.39□□□□□ -0.11
RNF43-202ENST00000577625 ABCF3Q9NUQ8 709 aa14.39□□□□□ -0.11
RNF43-202ENST00000577625 DDX56Q9NY93 547 aaKnown RBP14.39□□□□□ -0.11
RNF43-202ENST00000577625 G3BP2Q9UN86 482 aaKnown RBP14.39□□□□□ -0.11
RNF43-202ENST00000577625 PHF24Q9UPV7 400 aa14.39□□□□□ -0.11
RNF43-202ENST00000577625 TRIM17Q9Y577 477 aa14.39□□□□□ -0.11
RNF43-202ENST00000577625 DCDC2CA8MYV0 355 aa14.39□□□□□ -0.11
RNF43-202ENST00000577625 PIK3R2O00459 728 aa14.39□□□□□ -0.11
RNF43-202ENST00000577625 CYB561D2O14569 222 aa14.39□□□□□ -0.11
RNF43-202ENST00000577625 KRT16P08779 473 aa14.39□□□□□ -0.11
RNF43-202ENST00000577625 GBP1P32455 592 aa14.39□□□□□ -0.11
RNF43-202ENST00000577625 CLCNKBP51801 687 aa14.39□□□□□ -0.11
RNF43-202ENST00000577625 COPS2P61201 443 aa14.39□□□□□ -0.11
RNF43-202ENST00000577625 ACAP1Q15027 740 aa14.39□□□□□ -0.11
RNF43-202ENST00000577625 ATP13A4Q4VNC1 1196 aa14.39□□□□□ -0.11
RNF43-202ENST00000577625 FAM102AQ5T9C2 384 aaPredicted RBP14.39□□□□□ -0.11
RNF43-202ENST00000577625 TXNRD3NBQ6F5E7 133 aa14.39□□□□□ -0.11
RNF43-202ENST00000577625 FAM183BPQ6ZVS7 135 aa14.39□□□□□ -0.11
RNF43-202ENST00000577625 ANKS1BQ7Z6G8 1248 aa14.39□□□□□ -0.11
RNF43-202ENST00000577625 ARFGAP1Q8N6T3 406 aa14.39□□□□□ -0.11
RNF43-202ENST00000577625 RNF169Q8NCN4 708 aa14.39□□□□□ -0.11
RNF43-202ENST00000577625 SH3TC2Q8TF17 1288 aa14.39□□□□□ -0.11
RNF43-202ENST00000577625 C1orf54Q8WWF1 131 aa14.39□□□□□ -0.11
RNF43-202ENST00000577625 SLITRK1Q96PX8 696 aa14.39□□□□□ -0.11
RNF43-202ENST00000577625 TRAPPC9Q96Q05 1148 aa14.39□□□□□ -0.11
RNF43-202ENST00000577625 SLC4A5Q9BY07 1137 aa14.39□□□□□ -0.11
RNF43-202ENST00000577625 TRIM31Q9BZY9 425 aa14.39□□□□□ -0.11
RNF43-202ENST00000577625 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.39□□□□□ -0.112e-6■■□□□ 14
RNF43-202ENST00000577625 CCDC134Q9H6E4 229 aa14.39□□□□□ -0.11
RNF43-202ENST00000577625 KLHL11Q9NVR0 708 aa14.39□□□□□ -0.11
RNF43-202ENST00000577625 HESX1Q9UBX0 185 aa14.39□□□□□ -0.11
RNF43-202ENST00000577625 CREB3O43889 395 aa14.38□□□□□ -0.11
RNF43-202ENST00000577625 LRCH4O75427 683 aa14.38□□□□□ -0.11
RNF43-202ENST00000577625 GABBR2O75899 941 aa14.38□□□□□ -0.11
RNF43-202ENST00000577625 UPP2O95045 317 aa14.38□□□□□ -0.11
RNF43-202ENST00000577625 ECEL1O95672 775 aa14.38□□□□□ -0.11
RNF43-202ENST00000577625 KRT1P04264 644 aa14.38□□□□□ -0.11
RNF43-202ENST00000577625 GNAZP19086 355 aa14.38□□□□□ -0.11
RNF43-202ENST00000577625 YY1P25490 414 aa14.38□□□□□ -0.11
RNF43-202ENST00000577625 PTPN7P35236 360 aa14.38□□□□□ -0.11
RNF43-202ENST00000577625 PCK1P35558 622 aa14.38□□□□□ -0.11
RNF43-202ENST00000577625 KCNJ1P48048 391 aa14.38□□□□□ -0.11
RNF43-202ENST00000577625 EIF3BP55884 814 aaKnown RBP14.38□□□□□ -0.11
RNF43-202ENST00000577625 USP4Q13107 963 aa14.38□□□□□ -0.11
RNF43-202ENST00000577625 WSCD1Q658N2 575 aa14.38□□□□□ -0.11
RNF43-202ENST00000577625 MDM1Q8TC05 714 aa14.38□□□□□ -0.11
RNF43-202ENST00000577625 FBF1Q8TES7 1133 aa14.38□□□□□ -0.11
RNF43-202ENST00000577625 STK32AQ8WU08 396 aa14.38□□□□□ -0.11
RNF43-202ENST00000577625 RNF25Q96BH1 459 aaPredicted RBP14.38□□□□□ -0.11
RNF43-202ENST00000577625 SENP8Q96LD8 212 aa14.38□□□□□ -0.11
RNF43-202ENST00000577625 ELAC2Q9BQ52 826 aaKnown RBP14.38□□□□□ -0.11
RNF43-202ENST00000577625 SYT15Q9BQS2 421 aa14.38□□□□□ -0.11
RNF43-202ENST00000577625 DCLK3Q9C098 648 aa14.38□□□□□ -0.11
RNF43-202ENST00000577625 DNAI2Q9GZS0 605 aa14.38□□□□□ -0.11
RNF43-202ENST00000577625 VCXQ9H320 206 aa14.38□□□□□ -0.11
RNF43-202ENST00000577625 CHST7Q9NS84 486 aa14.38□□□□□ -0.11
RNF43-202ENST00000577625 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.38□□□□□ -0.111e-12■■□□□ 13.6
RNF43-202ENST00000577625 CTNNAL1Q9UBT7 734 aa14.38□□□□□ -0.11
RNF43-202ENST00000577625 TET1Q8NFU7 2136 aa14.38□□□□□ -0.11
RNF43-202ENST00000577625 A0A1B0GVG6 124 aa14.37□□□□□ -0.11
RNF43-202ENST00000577625 CASTOR2A6NHX0 329 aa14.37□□□□□ -0.11
RNF43-202ENST00000577625 A8MUI8 341 aa14.37□□□□□ -0.11
RNF43-202ENST00000577625 ARVCFO00192 962 aa14.37□□□□□ -0.11
RNF43-202ENST00000577625 GABRDO14764 452 aa14.37□□□□□ -0.11
RNF43-202ENST00000577625 CHN1P15882 459 aa14.37□□□□□ -0.11
RNF43-202ENST00000577625 ADORA2BP29275 332 aa14.37□□□□□ -0.11
RNF43-202ENST00000577625 TUBP50607 506 aa14.37□□□□□ -0.11
RNF43-202ENST00000577625 BCAT1P54687 386 aa14.37□□□□□ -0.11
RNF43-202ENST00000577625 SLC25A11Q02978 314 aaKnown RBP14.37□□□□□ -0.11
RNF43-202ENST00000577625 KLC1Q07866 573 aa14.37□□□□□ -0.11
RNF43-202ENST00000577625 BST2Q10589 180 aaKnown RBP14.37□□□□□ -0.11
RNF43-202ENST00000577625 BNIP1Q12981 228 aa14.37□□□□□ -0.11
RNF43-202ENST00000577625 CCNG2Q16589 344 aa14.37□□□□□ -0.11
RNF43-202ENST00000577625 CCDC142Q17RM4 750 aa14.37□□□□□ -0.11
RNF43-202ENST00000577625 OR6B2Q6IFH4 312 aa14.37□□□□□ -0.11
RNF43-202ENST00000577625 TRNP1Q6NT89 227 aa14.37□□□□□ -0.11
RNF43-202ENST00000577625 OLFML1Q6UWY5 402 aa14.37□□□□□ -0.11
RNF43-202ENST00000577625 TMEM110Q86TL2 294 aa14.37□□□□□ -0.11
RNF43-202ENST00000577625 ZNF598Q86UK7 904 aaKnown RBP14.37□□□□□ -0.11
RNF43-202ENST00000577625 ECHDC2Q86YB7 292 aa14.37□□□□□ -0.11
RNF43-202ENST00000577625 LRRC34Q8IZ02 419 aa14.37□□□□□ -0.11
RNF43-202ENST00000577625 ATXN2LQ8WWM7 1075 aaKnown RBP14.37□□□□□ -0.11
RNF43-202ENST00000577625 TNIP3Q96KP6 325 aa14.37□□□□□ -0.11
RNF43-202ENST00000577625 PAAF1Q9BRP4 392 aa14.37□□□□□ -0.11
RNF43-202ENST00000577625 HEMGNQ9BXL5 484 aa14.37□□□□□ -0.11
RNF43-202ENST00000577625 ZDHHC18Q9NUE0 388 aa14.37□□□□□ -0.11
RNF43-202ENST00000577625 BLOC1S6Q9UL45 172 aa14.37□□□□□ -0.11
RNF43-202ENST00000577625 KRT7P08729 469 aa14.37□□□□□ -0.11
RNF43-202ENST00000577625 TKTP29401 623 aaKnown RBP14.37□□□□□ -0.11
RNF43-202ENST00000577625 RPL9P32969 192 aaKnown RBP14.37□□□□□ -0.11
RNF43-202ENST00000577625 UPP1Q16831 310 aa14.37□□□□□ -0.11
RNF43-202ENST00000577625 HADHQ16836 314 aaKnown RBP14.37□□□□□ -0.11
RNF43-202ENST00000577625 ZFYVE27Q5T4F4 411 aa14.37□□□□□ -0.11
RNF43-202ENST00000577625 MFSD7Q6UXD7 560 aa14.37□□□□□ -0.11
RNF43-202ENST00000577625 ANKRD52Q8NB46 1076 aa14.37□□□□□ -0.11
RNF43-202ENST00000577625 B3GALNT2Q8NCR0 500 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms