RNA–Protein interactions for RNA: ENST00000577483.1

SSH2-205, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 1,630 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-205ENST00000577483 KIAA1468Q9P260 1216 aa13.35□□□□□ -0.27
SSH2-205ENST00000577483 NAGPAQ9UK23 515 aa13.35□□□□□ -0.27
SSH2-205ENST00000577483 ADH1CP00326 375 aa13.34□□□□□ -0.27
SSH2-205ENST00000577483 TBXAS1P24557 533 aaPredicted RBP13.34□□□□□ -0.27
SSH2-205ENST00000577483 EIF2DP41214 584 aaKnown RBP13.34□□□□□ -0.27
SSH2-205ENST00000577483 MARSP56192 900 aaKnown RBP13.34□□□□□ -0.27
SSH2-205ENST00000577483 KDSRQ06136 332 aa13.34□□□□□ -0.27
SSH2-205ENST00000577483 PDE4CQ08493 712 aa13.34□□□□□ -0.27
SSH2-205ENST00000577483 SIM2Q14190 667 aaPredicted RBP13.34□□□□□ -0.27
SSH2-205ENST00000577483 C2orf27AQ580R0 203 aa13.34□□□□□ -0.27
SSH2-205ENST00000577483 KLHDC10Q6PID8 442 aa13.34□□□□□ -0.27
SSH2-205ENST00000577483 SYT13Q7L8C5 426 aa13.34□□□□□ -0.27
SSH2-205ENST00000577483 BHLHA9Q7RTU4 235 aa13.34□□□□□ -0.27
SSH2-205ENST00000577483 ARHGEF19Q8IW93 802 aa13.34□□□□□ -0.27
SSH2-205ENST00000577483 ETFBKMTQ8IXQ9 262 aa13.34□□□□□ -0.27
SSH2-205ENST00000577483 TRIML1Q8N9V2 468 aa13.34□□□□□ -0.27
SSH2-205ENST00000577483 USP33Q8TEY7 942 aa13.34□□□□□ -0.27
SSH2-205ENST00000577483 SLC8A2Q9UPR5 921 aa13.34□□□□□ -0.27
SSH2-205ENST00000577483 NYNRINQ9P2P1 1898 aaKnown RBP13.33□□□□□ -0.28
SSH2-205ENST00000577483 ABCA7Q8IZY2 2146 aa13.33□□□□□ -0.28
SSH2-205ENST00000577483 LAMA1P25391 3075 aa13.33□□□□□ -0.28
SSH2-205ENST00000577483 RNF225M0QZC1 329 aaPredicted RBP13.33□□□□□ -0.28
SSH2-205ENST00000577483 KAT7O95251 611 aa13.33□□□□□ -0.28
SSH2-205ENST00000577483 CALCAP01258 141 aa13.33□□□□□ -0.28
SSH2-205ENST00000577483 CD19P15391 556 aa13.33□□□□□ -0.28
SSH2-205ENST00000577483 TGM1P22735 817 aa13.33□□□□□ -0.28
SSH2-205ENST00000577483 KCNH2Q12809 1159 aa13.33□□□□□ -0.28
SSH2-205ENST00000577483 DMC1Q14565 340 aa13.33□□□□□ -0.28
SSH2-205ENST00000577483 SGO2Q562F6 1265 aa13.33□□□□□ -0.28
SSH2-205ENST00000577483 C10orf120Q5SQS8 335 aa13.33□□□□□ -0.28
SSH2-205ENST00000577483 TMEM270Q6UE05 265 aa13.33□□□□□ -0.28
SSH2-205ENST00000577483 HTR3DQ70Z44 454 aa13.33□□□□□ -0.28
SSH2-205ENST00000577483 TMEM25Q86YD3 366 aa13.33□□□□□ -0.28
SSH2-205ENST00000577483 PPM1KQ8N3J5 372 aa13.33□□□□□ -0.28
SSH2-205ENST00000577483 NAT16Q8N8M0 369 aa13.33□□□□□ -0.28
SSH2-205ENST00000577483 TFAP2BQ92481 460 aa13.33□□□□□ -0.28
SSH2-205ENST00000577483 NDRG1Q92597 394 aaKnown RBP13.33□□□□□ -0.28
SSH2-205ENST00000577483 P2RY11Q96G91 374 aa13.33□□□□□ -0.28
SSH2-205ENST00000577483 NT5C1BQ96P26 610 aa13.33□□□□□ -0.28
SSH2-205ENST00000577483 PNKPQ96T60 521 aa13.33□□□□□ -0.28
SSH2-205ENST00000577483 ZSWIM1Q9BR11 485 aa13.33□□□□□ -0.28
SSH2-205ENST00000577483 SRRTQ9BXP5 876 aaKnown RBP13.33□□□□□ -0.28
SSH2-205ENST00000577483 UBXN6Q9BZV1 441 aa13.33□□□□□ -0.28
SSH2-205ENST00000577483 PARD6AQ9NPB6 346 aa13.33□□□□□ -0.28
SSH2-205ENST00000577483 SPHK2Q9NRA0 654 aa13.33□□□□□ -0.28
SSH2-205ENST00000577483 SDK1Q7Z5N4 2213 aa13.33□□□□□ -0.28
SSH2-205ENST00000577483 MUC22E2RYF6 1773 aaPredicted RBP13.32□□□□□ -0.28
SSH2-205ENST00000577483 O00370 1275 aa13.32□□□□□ -0.28
SSH2-205ENST00000577483 XPO1O14980 1071 aaKnown RBP13.32□□□□□ -0.28
SSH2-205ENST00000577483 TRIM24O15164 1050 aa13.32□□□□□ -0.28
SSH2-205ENST00000577483 P4HA2O15460 535 aa13.32□□□□□ -0.28
SSH2-205ENST00000577483 HOXC11O43248 304 aaPredicted RBP13.32□□□□□ -0.28
SSH2-205ENST00000577483 HNRNPLP14866 589 aaKnown RBP eCLIP13.32□□□□□ -0.281e-6■■□□□ 13.2
SSH2-205ENST00000577483 CNR2P34972 360 aa13.32□□□□□ -0.28
SSH2-205ENST00000577483 PSEN1P49768 467 aa13.32□□□□□ -0.28
SSH2-205ENST00000577483 TKTL1P51854 596 aa13.32□□□□□ -0.28
SSH2-205ENST00000577483 BCAT1P54687 386 aa13.32□□□□□ -0.28
SSH2-205ENST00000577483 YWHAEP62258 255 aaKnown RBP13.32□□□□□ -0.28
SSH2-205ENST00000577483 GAD2Q05329 585 aa13.32□□□□□ -0.28
SSH2-205ENST00000577483 BST2Q10589 180 aaKnown RBP13.32□□□□□ -0.28
SSH2-205ENST00000577483 PKDCCQ504Y2 493 aa13.32□□□□□ -0.28
SSH2-205ENST00000577483 LAIR1Q6GTX8 287 aa13.32□□□□□ -0.28
SSH2-205ENST00000577483 Q6ZNB5 142 aa13.32□□□□□ -0.28
SSH2-205ENST00000577483 RRAGAQ7L523 313 aa13.32□□□□□ -0.28
SSH2-205ENST00000577483 MIB1Q86YT6 1006 aa13.32□□□□□ -0.28
SSH2-205ENST00000577483 ZNF276Q8N554 614 aa13.32□□□□□ -0.28
SSH2-205ENST00000577483 CAMKK1Q8N5S9 505 aa13.32□□□□□ -0.28
SSH2-205ENST00000577483 UBA3Q8TBC4 463 aa13.32□□□□□ -0.28
SSH2-205ENST00000577483 ACDQ96AP0 544 aa13.32□□□□□ -0.28
SSH2-205ENST00000577483 ULBP1Q9BZM6 244 aa13.32□□□□□ -0.28
SSH2-205ENST00000577483 ZDHHC4Q9NPG8 344 aa13.32□□□□□ -0.28
SSH2-205ENST00000577483 CLIC5Q9NZA1 410 aa13.32□□□□□ -0.28
SSH2-205ENST00000577483 DNMT3LQ9UJW3 386 aa13.32□□□□□ -0.28
SSH2-205ENST00000577483 CEP250Q9BV73 2442 aa13.32□□□□□ -0.28
SSH2-205ENST00000577483 CKAP5Q14008 2032 aa13.32□□□□□ -0.28
SSH2-205ENST00000577483 CCDC163A0A0D9SF12 145 aa13.31□□□□□ -0.28
SSH2-205ENST00000577483 TULP3O75386 442 aa13.31□□□□□ -0.28
SSH2-205ENST00000577483 STC2O76061 302 aa13.31□□□□□ -0.28
SSH2-205ENST00000577483 VDRP11473 427 aa13.31□□□□□ -0.28
SSH2-205ENST00000577483 KIR2DL1P43626 348 aaPredicted RBP13.31□□□□□ -0.28
SSH2-205ENST00000577483 ADIGQ0VDE8 80 aa13.31□□□□□ -0.28
SSH2-205ENST00000577483 ANO4Q32M45 955 aa13.31□□□□□ -0.28
SSH2-205ENST00000577483 EMC10Q5UCC4 262 aa13.31□□□□□ -0.28
SSH2-205ENST00000577483 CCDC33Q8N5R6 958 aa13.31□□□□□ -0.28
SSH2-205ENST00000577483 FAM160A2Q8N612 972 aaPredicted RBP13.31□□□□□ -0.28
SSH2-205ENST00000577483 GAB3Q8WWW8 586 aa13.31□□□□□ -0.28
SSH2-205ENST00000577483 RMDN1Q96DB5 314 aa13.31□□□□□ -0.28
SSH2-205ENST00000577483 ARHGEF4Q9NR80 690 aa13.31□□□□□ -0.28
SSH2-205ENST00000577483 RWDD2AQ9UIY3 292 aa13.31□□□□□ -0.28
SSH2-205ENST00000577483 RASAL2Q9UJF2 1139 aa13.31□□□□□ -0.28
SSH2-205ENST00000577483 GMEB2Q9UKD1 530 aa13.31□□□□□ -0.28
SSH2-205ENST00000577483 RAB23Q9ULC3 237 aa13.31□□□□□ -0.28
SSH2-205ENST00000577483 PCDHB4Q9Y5E5 795 aa13.31□□□□□ -0.28
SSH2-205ENST00000577483 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.31□□□□□ -0.28
SSH2-205ENST00000577483 A0A0A0MRY4 1105 aa13.31□□□□□ -0.28
SSH2-205ENST00000577483 RPP40O75818 363 aaKnown RBP13.31□□□□□ -0.28
SSH2-205ENST00000577483 GABBR2O75899 941 aa13.31□□□□□ -0.28
SSH2-205ENST00000577483 GNA14O95837 355 aa13.31□□□□□ -0.28
SSH2-205ENST00000577483 AFPP02771 609 aaKnown RBP13.31□□□□□ -0.28
SSH2-205ENST00000577483 KLKB1P03952 638 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms