RNA–Protein interactions for RNA: ENST00000577228.1

CDH8-202, Transcript of cadherin 8, humanhuman

TSL 4

Gene CDH8, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-202ENST00000577228 EGFLAMQ63HQ2 1017 aa12.49□□□□□ -0.41
CDH8-202ENST00000577228 RABEPKQ7Z6M1 372 aa12.49□□□□□ -0.41
CDH8-202ENST00000577228 MIB1Q86YT6 1006 aa12.49□□□□□ -0.41
CDH8-202ENST00000577228 HDDC3Q8N4P3 179 aa12.49□□□□□ -0.41
CDH8-202ENST00000577228 DEFB119Q8N690 84 aa12.49□□□□□ -0.41
CDH8-202ENST00000577228 ZMIZ2Q8NF64 920 aa12.49□□□□□ -0.41
CDH8-202ENST00000577228 GOLGA5Q8TBA6 731 aa12.49□□□□□ -0.41
CDH8-202ENST00000577228 PARD3BQ8TEW8 1205 aa12.49□□□□□ -0.41
CDH8-202ENST00000577228 GATA6Q92908 595 aa12.49□□□□□ -0.41
CDH8-202ENST00000577228 ELMO3Q96BJ8 720 aa12.49□□□□□ -0.41
CDH8-202ENST00000577228 SMOQ99835 787 aa12.49□□□□□ -0.41
CDH8-202ENST00000577228 FBXO44Q9H4M3 255 aa12.49□□□□□ -0.41
CDH8-202ENST00000577228 FSCN3Q9NQT6 498 aa12.49□□□□□ -0.41
CDH8-202ENST00000577228 TLR8Q9NR97 1041 aaKnown RBP12.49□□□□□ -0.41
CDH8-202ENST00000577228 HCN2Q9UL51 889 aa12.49□□□□□ -0.41
CDH8-202ENST00000577228 LAMA1P25391 3075 aa12.49□□□□□ -0.41
CDH8-202ENST00000577228 MYO18AQ92614 2054 aaKnown RBP12.49□□□□□ -0.41
CDH8-202ENST00000577228 FRYQ5TBA9 3013 aa12.48□□□□□ -0.41
CDH8-202ENST00000577228 CACNA1EQ15878 2313 aa12.48□□□□□ -0.41
CDH8-202ENST00000577228 PVALEFA0A1B0GWK0 134 aa12.48□□□□□ -0.41
CDH8-202ENST00000577228 A0A1W2PQF6 199 aa12.48□□□□□ -0.41
CDH8-202ENST00000577228 UPK3BL1B0FP48 263 aa12.48□□□□□ -0.41
CDH8-202ENST00000577228 UPK3BL2E5RIL1 263 aa12.48□□□□□ -0.41
CDH8-202ENST00000577228 NEDD8-MDP1E9PL57 170 aa12.48□□□□□ -0.41
CDH8-202ENST00000577228 HYAL3O43820 417 aaPredicted RBP12.48□□□□□ -0.41
CDH8-202ENST00000577228 CACNG3O60359 315 aa12.48□□□□□ -0.41
CDH8-202ENST00000577228 OPHN1O60890 802 aa12.48□□□□□ -0.41
CDH8-202ENST00000577228 VNN1O95497 513 aa12.48□□□□□ -0.41
CDH8-202ENST00000577228 C4BPAP04003 597 aaKnown RBP12.48□□□□□ -0.41
CDH8-202ENST00000577228 SERPINF2P08697 491 aa12.48□□□□□ -0.41
CDH8-202ENST00000577228 AFMP43652 599 aa12.48□□□□□ -0.41
CDH8-202ENST00000577228 PGFP49763 221 aa12.48□□□□□ -0.41
CDH8-202ENST00000577228 MAP3K7CLP57077 242 aa12.48□□□□□ -0.41
CDH8-202ENST00000577228 SIM1P81133 766 aaPredicted RBP12.48□□□□□ -0.41
CDH8-202ENST00000577228 ZNF33AQ06730 810 aa12.48□□□□□ -0.41
CDH8-202ENST00000577228 GOLGA8FQ08AF8 430 aa12.48□□□□□ -0.41
CDH8-202ENST00000577228 GOLGA8DPQ0D2H9 430 aa12.48□□□□□ -0.41
CDH8-202ENST00000577228 SEMA3BQ13214 749 aa12.48□□□□□ -0.41
CDH8-202ENST00000577228 ORC1Q13415 861 aa12.48□□□□□ -0.41
CDH8-202ENST00000577228 SDE2Q6IQ49 451 aa12.48□□□□□ -0.41
CDH8-202ENST00000577228 HTR3DQ70Z44 454 aa12.48□□□□□ -0.41
CDH8-202ENST00000577228 PIP4P1Q86T03 277 aa12.48□□□□□ -0.41
CDH8-202ENST00000577228 CHPFQ8IZ52 775 aa12.48□□□□□ -0.41
CDH8-202ENST00000577228 SLC2A14Q8TDB8 520 aa12.48□□□□□ -0.41
CDH8-202ENST00000577228 ZCCHC14Q8WYQ9 949 aaKnown RBP12.48□□□□□ -0.41
CDH8-202ENST00000577228 XPO6Q96QU8 1125 aaKnown RBP12.48□□□□□ -0.41
CDH8-202ENST00000577228 BBS2Q9BXC9 721 aa12.48□□□□□ -0.41
CDH8-202ENST00000577228 KLF16Q9BXK1 252 aaPredicted RBP12.48□□□□□ -0.41
CDH8-202ENST00000577228 CAPN10Q9HC96 672 aa12.48□□□□□ -0.41
CDH8-202ENST00000577228 CSNK1G1Q9HCP0 422 aa12.48□□□□□ -0.41
CDH8-202ENST00000577228 FAM49BQ9NUQ9 324 aa12.48□□□□□ -0.41
CDH8-202ENST00000577228 WDR35Q9P2L0 1181 aa12.48□□□□□ -0.41
CDH8-202ENST00000577228 HMGXB4Q9UGU5 601 aa12.48□□□□□ -0.41
CDH8-202ENST00000577228 LSM7Q9UK45 103 aaKnown RBP12.48□□□□□ -0.41
CDH8-202ENST00000577228 STARD13Q9Y3M8 1113 aa12.48□□□□□ -0.41
CDH8-202ENST00000577228 NEUROG3Q9Y4Z2 214 aa12.48□□□□□ -0.41
CDH8-202ENST00000577228 PI4KAP42356 2102 aa12.47□□□□□ -0.41
CDH8-202ENST00000577228 IGHV1OR15-9A0A0B4J2B8 117 aa12.47□□□□□ -0.41
CDH8-202ENST00000577228 K7ELQ4 463 aaPredicted RBP12.47□□□□□ -0.41
CDH8-202ENST00000577228 GREM1O60565 184 aa12.47□□□□□ -0.41
CDH8-202ENST00000577228 ZNF217O75362 1048 aa12.47□□□□□ -0.41
CDH8-202ENST00000577228 BEST1O76090 585 aa12.47□□□□□ -0.41
CDH8-202ENST00000577228 TBX18O95935 607 aa12.47□□□□□ -0.41
CDH8-202ENST00000577228 FAM200BP0CF97 657 aa12.47□□□□□ -0.41
CDH8-202ENST00000577228 TYRP14679 529 aa12.47□□□□□ -0.41
CDH8-202ENST00000577228 NDUFV2P19404 249 aa12.47□□□□□ -0.41
CDH8-202ENST00000577228 NDST1P52848 882 aa12.47□□□□□ -0.41
CDH8-202ENST00000577228 CLDN10P78369 228 aa12.47□□□□□ -0.41
CDH8-202ENST00000577228 CUL4BQ13620 913 aa12.47□□□□□ -0.41
CDH8-202ENST00000577228 TPGS1Q6ZTW0 290 aa12.47□□□□□ -0.41
CDH8-202ENST00000577228 IPO4Q8TEX9 1081 aaKnown RBP12.47□□□□□ -0.41
CDH8-202ENST00000577228 ERLEC1Q96DZ1 483 aa12.47□□□□□ -0.41
CDH8-202ENST00000577228 ACOX2Q99424 681 aa12.47□□□□□ -0.41
CDH8-202ENST00000577228 CYLDQ9NQC7 956 aa12.47□□□□□ -0.41
CDH8-202ENST00000577228 FAM13BQ9NYF5 915 aa12.47□□□□□ -0.41
CDH8-202ENST00000577228 MARK1Q9P0L2 795 aa12.47□□□□□ -0.41
CDH8-202ENST00000577228 CYP8B1Q9UNU6 501 aa12.47□□□□□ -0.41
CDH8-202ENST00000577228 ARHGAP33O14559 1287 aa12.46□□□□□ -0.41
CDH8-202ENST00000577228 CYP26A1O43174 497 aa12.46□□□□□ -0.41
CDH8-202ENST00000577228 RPN1P04843 607 aaKnown RBP12.46□□□□□ -0.41
CDH8-202ENST00000577228 TRIM21P19474 475 aaKnown RBP12.46□□□□□ -0.41
CDH8-202ENST00000577228 ADORA2BP29275 332 aa12.46□□□□□ -0.41
CDH8-202ENST00000577228 RDXP35241 583 aaKnown RBP12.46□□□□□ -0.41
CDH8-202ENST00000577228 ATP5C1P36542 298 aaKnown RBP12.46□□□□□ -0.41
CDH8-202ENST00000577228 SGSM1Q2NKQ1 1148 aa12.46□□□□□ -0.41
CDH8-202ENST00000577228 ZACNQ401N2 412 aa12.46□□□□□ -0.41
CDH8-202ENST00000577228 FOXD4L5Q5VV16 416 aaPredicted RBP12.46□□□□□ -0.41
CDH8-202ENST00000577228 TOGARAM2Q6ZUX3 1019 aa12.46□□□□□ -0.41
CDH8-202ENST00000577228 GPRIN1Q7Z2K8 1008 aa12.46□□□□□ -0.41
CDH8-202ENST00000577228 UNC93AQ86WB7 457 aa12.46□□□□□ -0.41
CDH8-202ENST00000577228 SLC41A1Q8IVJ1 513 aa12.46□□□□□ -0.41
CDH8-202ENST00000577228 GRAMD1CQ8IYS0 662 aa12.46□□□□□ -0.41
CDH8-202ENST00000577228 CEP57L1Q8IYX8 460 aa12.46□□□□□ -0.41
CDH8-202ENST00000577228 CRYBG2Q8N1P7 616 aa12.46□□□□□ -0.41
CDH8-202ENST00000577228 MINDY1Q8N5J2 469 aa12.46□□□□□ -0.41
CDH8-202ENST00000577228 C12orf29Q8N999 325 aa12.46□□□□□ -0.41
CDH8-202ENST00000577228 TRIML1Q8N9V2 468 aa12.46□□□□□ -0.41
CDH8-202ENST00000577228 OR2I1PQ8NGU4 316 aa12.46□□□□□ -0.41
CDH8-202ENST00000577228 FOXD4L4Q8WXT5 416 aaPredicted RBP12.46□□□□□ -0.41
CDH8-202ENST00000577228 TAF4BQ92750 862 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms