RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 SFR1Q86XK3 245 aa17.28■□□□□ 0.36
CTDNEP1-211ENST00000575783 ZNF843Q8N446 348 aa17.28■□□□□ 0.36
CTDNEP1-211ENST00000575783 KRI1Q8N9T8 703 aaKnown RBP17.28■□□□□ 0.36
CTDNEP1-211ENST00000575783 CADM4Q8NFZ8 388 aa17.28■□□□□ 0.36
CTDNEP1-211ENST00000575783 BBS2Q9BXC9 721 aa17.28■□□□□ 0.36
CTDNEP1-211ENST00000575783 NACA2Q9H009 215 aa17.28■□□□□ 0.36
CTDNEP1-211ENST00000575783 SNX25Q9H3E2 840 aa17.28■□□□□ 0.36
CTDNEP1-211ENST00000575783 PCIF1Q9H4Z3 704 aa17.28■□□□□ 0.36
CTDNEP1-211ENST00000575783 CCSER2Q9H7U1 834 aa17.28■□□□□ 0.36
CTDNEP1-211ENST00000575783 TMEM30AQ9NV96 361 aa17.28■□□□□ 0.36
CTDNEP1-211ENST00000575783 TBC1D7Q9P0N9 293 aa17.28■□□□□ 0.36
CTDNEP1-211ENST00000575783 EIF2B4Q9UI10 523 aaKnown RBP17.28■□□□□ 0.36
CTDNEP1-211ENST00000575783 EXOC7Q9UPT5 735 aa17.28■□□□□ 0.36
CTDNEP1-211ENST00000575783 NFE2L3Q9Y4A8 694 aa17.28■□□□□ 0.36
CTDNEP1-211ENST00000575783 PCDHGB2Q9Y5G2 931 aa17.28■□□□□ 0.36
CTDNEP1-211ENST00000575783 PLK4O00444 970 aa17.27■□□□□ 0.36
CTDNEP1-211ENST00000575783 CLDN5O00501 218 aa17.27■□□□□ 0.36
CTDNEP1-211ENST00000575783 TNFSF14O43557 240 aa17.27■□□□□ 0.36
CTDNEP1-211ENST00000575783 LDHAP00338 332 aaKnown RBP17.27■□□□□ 0.36
CTDNEP1-211ENST00000575783 TYRP14679 529 aa17.27■□□□□ 0.36
CTDNEP1-211ENST00000575783 DDIT3P35638 169 aa17.27■□□□□ 0.36
CTDNEP1-211ENST00000575783 CSNK1EP49674 416 aaKnown RBP17.27■□□□□ 0.36
CTDNEP1-211ENST00000575783 SMAD1Q15797 465 aaKnown RBP17.27■□□□□ 0.36
CTDNEP1-211ENST00000575783 LARP1BQ659C4 914 aaKnown RBP17.27■□□□□ 0.36
CTDNEP1-211ENST00000575783 ARL6IP4Q66PJ3 421 aaKnown RBP17.27■□□□□ 0.36
CTDNEP1-211ENST00000575783 LRRC69Q6ZNQ3 347 aa17.27■□□□□ 0.36
CTDNEP1-211ENST00000575783 TPGS1Q6ZTW0 290 aa17.27■□□□□ 0.36
CTDNEP1-211ENST00000575783 DYMQ7RTS9 669 aa17.27■□□□□ 0.36
CTDNEP1-211ENST00000575783 NUP93Q8N1F7 819 aa17.27■□□□□ 0.36
CTDNEP1-211ENST00000575783 PDZD8Q8NEN9 1154 aa17.27■□□□□ 0.36
CTDNEP1-211ENST00000575783 HVCN1Q96D96 273 aa17.27■□□□□ 0.36
CTDNEP1-211ENST00000575783 ANKRD36BP1Q96IX9 119 aa17.27■□□□□ 0.36
CTDNEP1-211ENST00000575783 AK8Q96MA6 479 aa17.27■□□□□ 0.36
CTDNEP1-211ENST00000575783 ACCSQ96QU6 501 aa17.27■□□□□ 0.36
CTDNEP1-211ENST00000575783 MRPL45Q9BRJ2 306 aaKnown RBP17.27■□□□□ 0.36
CTDNEP1-211ENST00000575783 ZNF518BQ9C0D4 1074 aa17.27■□□□□ 0.36
CTDNEP1-211ENST00000575783 PRORYQ9H606 182 aa17.27■□□□□ 0.36
CTDNEP1-211ENST00000575783 MRPL44Q9H9J2 332 aaKnown RBP17.27■□□□□ 0.36
CTDNEP1-211ENST00000575783 ITM2CQ9NQX7 267 aa17.27■□□□□ 0.36
CTDNEP1-211ENST00000575783 HELZP42694 1942 aaKnown RBP17.27■□□□□ 0.35
CTDNEP1-211ENST00000575783 CEP192Q8TEP8 1941 aa17.27■□□□□ 0.35
CTDNEP1-211ENST00000575783 MYOFQ9NZM1 2061 aa17.27■□□□□ 0.35
CTDNEP1-211ENST00000575783 MYO18AQ92614 2054 aaKnown RBP17.26■□□□□ 0.35
CTDNEP1-211ENST00000575783 METTL12A8MUP2 240 aa17.26■□□□□ 0.35
CTDNEP1-211ENST00000575783 KCNJ18B7U540 433 aa17.26■□□□□ 0.35
CTDNEP1-211ENST00000575783 SLC26A4O43511 780 aa17.26■□□□□ 0.35
CTDNEP1-211ENST00000575783 PTPN1P18031 435 aaKnown RBP17.26■□□□□ 0.35
CTDNEP1-211ENST00000575783 SEMG2Q02383 582 aa17.26■□□□□ 0.35
CTDNEP1-211ENST00000575783 STARD3Q14849 445 aa17.26■□□□□ 0.35
CTDNEP1-211ENST00000575783 FUT11Q495W5 492 aa17.26■□□□□ 0.35
CTDNEP1-211ENST00000575783 SYCP3Q8IZU3 236 aa17.26■□□□□ 0.35
CTDNEP1-211ENST00000575783 OR5B17Q8NGF7 314 aa17.26■□□□□ 0.35
CTDNEP1-211ENST00000575783 OR6B3Q8NGW1 331 aa17.26■□□□□ 0.35
CTDNEP1-211ENST00000575783 SCAMP5Q8TAC9 235 aa17.26■□□□□ 0.35
CTDNEP1-211ENST00000575783 BHMTQ93088 406 aa17.26■□□□□ 0.35
CTDNEP1-211ENST00000575783 TRIM9Q9C026 710 aa17.26■□□□□ 0.35
CTDNEP1-211ENST00000575783 MKRN2Q9H000 416 aaKnown RBP17.26■□□□□ 0.35
CTDNEP1-211ENST00000575783 USP36Q9P275 1121 aaKnown RBP17.26■□□□□ 0.35
CTDNEP1-211ENST00000575783 WDR35Q9P2L0 1181 aa17.26■□□□□ 0.35
CTDNEP1-211ENST00000575783 STON1Q9Y6Q2 735 aa17.26■□□□□ 0.35
CTDNEP1-211ENST00000575783 GFRA2O00451 464 aa17.25■□□□□ 0.35
CTDNEP1-211ENST00000575783 KCNK3O14649 394 aa17.25■□□□□ 0.35
CTDNEP1-211ENST00000575783 CACNG3O60359 315 aa17.25■□□□□ 0.35
CTDNEP1-211ENST00000575783 RTN3O95197 1032 aaPredicted RBP17.25■□□□□ 0.35
CTDNEP1-211ENST00000575783 TNNC2P02585 160 aa17.25■□□□□ 0.35
CTDNEP1-211ENST00000575783 DGKGP49619 791 aa17.25■□□□□ 0.35
CTDNEP1-211ENST00000575783 TPMTP51580 245 aa17.25■□□□□ 0.35
CTDNEP1-211ENST00000575783 METTL3Q86U44 580 aaKnown RBP17.25■□□□□ 0.35
CTDNEP1-211ENST00000575783 OVCA2Q8WZ82 227 aa17.25■□□□□ 0.35
CTDNEP1-211ENST00000575783 SNX19Q92543 992 aa17.25■□□□□ 0.35
CTDNEP1-211ENST00000575783 LARP4BQ92615 738 aaKnown RBP17.25■□□□□ 0.35
CTDNEP1-211ENST00000575783 FCRL3Q96P31 734 aaPredicted RBP17.25■□□□□ 0.35
CTDNEP1-211ENST00000575783 KCNK16Q96T55 309 aa17.25■□□□□ 0.35
CTDNEP1-211ENST00000575783 CBWD1Q9BRT8 395 aa17.25■□□□□ 0.35
CTDNEP1-211ENST00000575783 ELOVL4Q9GZR5 314 aa17.25■□□□□ 0.35
CTDNEP1-211ENST00000575783 DPEP3Q9H4B8 488 aa17.25■□□□□ 0.35
CTDNEP1-211ENST00000575783 INTS13Q9NVM9 706 aa17.25■□□□□ 0.35
CTDNEP1-211ENST00000575783 NME7Q9Y5B8 376 aa17.25■□□□□ 0.35
CTDNEP1-211ENST00000575783 PTPRBP23467 1997 aa17.25■□□□□ 0.35
CTDNEP1-211ENST00000575783 PTPRJQ12913 1337 aa17.24■□□□□ 0.35
CTDNEP1-211ENST00000575783 GOLGA4Q13439 2230 aaKnown RBP17.24■□□□□ 0.35
CTDNEP1-211ENST00000575783 CAPN9O14815 690 aa17.24■□□□□ 0.35
CTDNEP1-211ENST00000575783 PPP1R37O75864 691 aa17.24■□□□□ 0.35
CTDNEP1-211ENST00000575783 GARTP22102 1010 aa17.24■□□□□ 0.35
CTDNEP1-211ENST00000575783 OXTRP30559 389 aa17.24■□□□□ 0.35
CTDNEP1-211ENST00000575783 EIF2S3P41091 472 aaKnown RBP17.24■□□□□ 0.35
CTDNEP1-211ENST00000575783 PTPRNQ16849 979 aa17.24■□□□□ 0.35
CTDNEP1-211ENST00000575783 KIF19Q2TAC6 998 aa17.24■□□□□ 0.35
CTDNEP1-211ENST00000575783 L1TD1Q5T7N2 865 aaKnown RBP17.24■□□□□ 0.35
CTDNEP1-211ENST00000575783 TMPRSS6Q8IU80 811 aa17.24■□□□□ 0.35
CTDNEP1-211ENST00000575783 SIPA1Q96FS4 1042 aa17.24■□□□□ 0.35
CTDNEP1-211ENST00000575783 STRA6Q9BX79 667 aa17.24■□□□□ 0.35
CTDNEP1-211ENST00000575783 B3GNT5Q9BYG0 378 aa17.24■□□□□ 0.35
CTDNEP1-211ENST00000575783 GMIPQ9P107 970 aa17.24■□□□□ 0.35
CTDNEP1-211ENST00000575783 SNX11Q9Y5W9 270 aa17.24■□□□□ 0.35
CTDNEP1-211ENST00000575783 NAV2Q8IVL1 2488 aa17.23■□□□□ 0.35
CTDNEP1-211ENST00000575783 E9PAM4 449 aa17.23■□□□□ 0.35
CTDNEP1-211ENST00000575783 J3QKU1 62 aa17.23■□□□□ 0.35
CTDNEP1-211ENST00000575783 RRP8O43159 456 aaKnown RBP17.23■□□□□ 0.35
CTDNEP1-211ENST00000575783 GCNT3O95395 438 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms