RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 OSER1Q9NX31 292 aa23.25■■□□□ 1.31
SNF8-216ENST00000573795 BCCIPQ9P287 314 aaKnown RBP eCLIP23.25■■□□□ 1.31
SNF8-216ENST00000573795 DEC1Q9P2X7 70 aa23.25■■□□□ 1.31
SNF8-216ENST00000573795 RCOR1Q9UKL0 485 aa23.25■■□□□ 1.31
SNF8-216ENST00000573795 AKAP13Q12802 2813 aa23.25■■□□□ 1.31
SNF8-216ENST00000573795 TBC1D3BA6NDS4 549 aa23.24■■□□□ 1.31
SNF8-216ENST00000573795 HHLA1C9JL84 531 aa23.24■■□□□ 1.31
SNF8-216ENST00000573795 NR3C1P04150 777 aa23.24■■□□□ 1.31
SNF8-216ENST00000573795 DNM1Q05193 864 aaKnown RBP23.24■■□□□ 1.31
SNF8-216ENST00000573795 ZNF252P-AS1Q0IIN9 211 aa23.24■■□□□ 1.31
SNF8-216ENST00000573795 SGSM1Q2NKQ1 1148 aa23.24■■□□□ 1.31
SNF8-216ENST00000573795 ANO4Q32M45 955 aa23.24■■□□□ 1.31
SNF8-216ENST00000573795 C10orf76Q5T2E6 689 aa23.24■■□□□ 1.31
SNF8-216ENST00000573795 PEAR1Q5VY43 1037 aaPredicted RBP23.24■■□□□ 1.31
SNF8-216ENST00000573795 BTBD8Q5XKL5 378 aa23.24■■□□□ 1.31
SNF8-216ENST00000573795 HTR3DQ70Z44 454 aa23.24■■□□□ 1.31
SNF8-216ENST00000573795 TMC2Q8TDI7 906 aa23.24■■□□□ 1.31
SNF8-216ENST00000573795 KCNV2Q8TDN2 545 aa23.24■■□□□ 1.31
SNF8-216ENST00000573795 CIZ1Q9ULV3 898 aaPredicted RBP23.24■■□□□ 1.31
SNF8-216ENST00000573795 ADAMTS9Q9P2N4 1935 aa23.23■■□□□ 1.31
SNF8-216ENST00000573795 A0A1W2PQF6 199 aa23.23■■□□□ 1.31
SNF8-216ENST00000573795 PDXKO00764 312 aa23.23■■□□□ 1.31
SNF8-216ENST00000573795 RPN1P04843 607 aaKnown RBP23.23■■□□□ 1.31
SNF8-216ENST00000573795 GABRG2P18507 467 aa23.23■■□□□ 1.31
SNF8-216ENST00000573795 CSRP1P21291 193 aaKnown RBP23.23■■□□□ 1.31
SNF8-216ENST00000573795 TRIM61Q5EBN2 209 aa23.23■■□□□ 1.31
SNF8-216ENST00000573795 ATL3Q6DD88 541 aa23.23■■□□□ 1.31
SNF8-216ENST00000573795 CLEC20AQ6ZU45 233 aa23.23■■□□□ 1.31
SNF8-216ENST00000573795 UNC93AQ86WB7 457 aa23.23■■□□□ 1.31
SNF8-216ENST00000573795 TAF4BQ92750 862 aa23.23■■□□□ 1.31
SNF8-216ENST00000573795 CYLDQ9NQC7 956 aa23.23■■□□□ 1.31
SNF8-216ENST00000573795 STARD13Q9Y3M8 1113 aa23.23■■□□□ 1.31
SNF8-216ENST00000573795 ATXN2Q99700 1313 aaKnown RBP23.23■■□□□ 1.31
SNF8-216ENST00000573795 PCDH15Q96QU1 1955 aa23.23■■□□□ 1.31
SNF8-216ENST00000573795 IGF2RP11717 2491 aa23.22■■□□□ 1.31
SNF8-216ENST00000573795 CYP26A1O43174 497 aa23.22■■□□□ 1.31
SNF8-216ENST00000573795 HLA-DRAP01903 254 aa23.22■■□□□ 1.31
SNF8-216ENST00000573795 P4HA1P13674 534 aa23.22■■□□□ 1.31
SNF8-216ENST00000573795 ADORA2BP29275 332 aa23.22■■□□□ 1.31
SNF8-216ENST00000573795 INCA1Q0VD86 236 aa23.22■■□□□ 1.31
SNF8-216ENST00000573795 SPDYCQ5MJ68 293 aa23.22■■□□□ 1.31
SNF8-216ENST00000573795 EGFLAMQ63HQ2 1017 aa23.22■■□□□ 1.31
SNF8-216ENST00000573795 SYT12Q8IV01 421 aa23.22■■□□□ 1.31
SNF8-216ENST00000573795 P2RY11Q96G91 374 aa23.22■■□□□ 1.31
SNF8-216ENST00000573795 ACOX2Q99424 681 aa23.22■■□□□ 1.31
SNF8-216ENST00000573795 NACA2Q9H009 215 aa23.22■■□□□ 1.31
SNF8-216ENST00000573795 FBXO44Q9H4M3 255 aa23.22■■□□□ 1.31
SNF8-216ENST00000573795 NMUR1Q9HB89 426 aa23.22■■□□□ 1.31
SNF8-216ENST00000573795 APOBEC3GQ9HC16 384 aaKnown RBP23.22■■□□□ 1.31
SNF8-216ENST00000573795 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.22■■□□□ 1.31
SNF8-216ENST00000573795 TLR8Q9NR97 1041 aaKnown RBP23.22■■□□□ 1.31
SNF8-216ENST00000573795 SCML2Q9UQR0 700 aa23.22■■□□□ 1.31
SNF8-216ENST00000573795 SPEGQ15772 3267 aa23.21■■□□□ 1.31
SNF8-216ENST00000573795 MAP3K13O43283 966 aa23.21■■□□□ 1.31
SNF8-216ENST00000573795 CACNG3O60359 315 aa23.21■■□□□ 1.31
SNF8-216ENST00000573795 TOP3BO95985 862 aaKnown RBP23.21■■□□□ 1.31
SNF8-216ENST00000573795 FAM200BP0CF97 657 aa23.21■■□□□ 1.31
SNF8-216ENST00000573795 CEACAM1P13688 526 aa23.21■■□□□ 1.31
SNF8-216ENST00000573795 HOXB2P14652 356 aa23.21■■□□□ 1.31
SNF8-216ENST00000573795 ITPKAP23677 461 aa23.21■■□□□ 1.31
SNF8-216ENST00000573795 WASP42768 502 aa23.21■■□□□ 1.31
SNF8-216ENST00000573795 LYSMD4Q5XG99 296 aa23.21■■□□□ 1.31
SNF8-216ENST00000573795 TRMT11Q7Z4G4 463 aaKnown RBP23.21■■□□□ 1.31
SNF8-216ENST00000573795 PGBD3Q8N328 593 aa23.21■■□□□ 1.31
SNF8-216ENST00000573795 HNRNPABQ99729 332 aaKnown RBP23.21■■□□□ 1.31
SNF8-216ENST00000573795 DNAJC17Q9NVM6 304 aaKnown RBP23.21■■□□□ 1.31
SNF8-216ENST00000573795 MARK1Q9P0L2 795 aa23.21■■□□□ 1.31
SNF8-216ENST00000573795 CALCOCO1Q9P1Z2 691 aa23.21■■□□□ 1.31
SNF8-216ENST00000573795 PILRBQ9UKJ0 227 aa23.21■■□□□ 1.31
SNF8-216ENST00000573795 A0A1B0GVL5 298 aa23.2■■□□□ 1.3
SNF8-216ENST00000573795 PRRT4C9JH25 899 aa23.2■■□□□ 1.3
SNF8-216ENST00000573795 NEDD8-MDP1E9PL57 170 aa23.2■■□□□ 1.3
SNF8-216ENST00000573795 IKBKBO14920 756 aa23.2■■□□□ 1.3
SNF8-216ENST00000573795 MDM4O15151 490 aa23.2■■□□□ 1.3
SNF8-216ENST00000573795 PROS1P07225 676 aa23.2■■□□□ 1.3
SNF8-216ENST00000573795 PDIA4P13667 645 aaKnown RBP23.2■■□□□ 1.3
SNF8-216ENST00000573795 PFKFB1P16118 471 aa23.2■■□□□ 1.3
SNF8-216ENST00000573795 ENGP17813 658 aa23.2■■□□□ 1.3
SNF8-216ENST00000573795 SPINK2P20155 84 aa23.2■■□□□ 1.3
SNF8-216ENST00000573795 NTSR1P30989 418 aa23.2■■□□□ 1.3
SNF8-216ENST00000573795 PIK3CAP42336 1068 aa23.2■■□□□ 1.3
SNF8-216ENST00000573795 FOXC1Q12948 553 aa23.2■■□□□ 1.3
SNF8-216ENST00000573795 UAP1L1Q3KQV9 507 aa23.2■■□□□ 1.3
SNF8-216ENST00000573795 PREPLQ4J6C6 727 aaPredicted RBP23.2■■□□□ 1.3
SNF8-216ENST00000573795 CEP135Q66GS9 1140 aa23.2■■□□□ 1.3
SNF8-216ENST00000573795 GRAMD4Q6IC98 578 aa23.2■■□□□ 1.3
SNF8-216ENST00000573795 SLC23A3Q6PIS1 610 aa23.2■■□□□ 1.3
SNF8-216ENST00000573795 TOGARAM2Q6ZUX3 1019 aa23.2■■□□□ 1.3
SNF8-216ENST00000573795 DEFB124Q8NES8 71 aa23.2■■□□□ 1.3
SNF8-216ENST00000573795 JAKMIP2Q96AA8 810 aa23.2■■□□□ 1.3
SNF8-216ENST00000573795 TMEM121BQ9BXQ6 578 aaPredicted RBP23.2■■□□□ 1.3
SNF8-216ENST00000573795 CFAP45Q9UL16 551 aa23.2■■□□□ 1.3
SNF8-216ENST00000573795 TRAF3IP3Q9Y228 551 aa23.2■■□□□ 1.3
SNF8-216ENST00000573795 HPSEQ9Y251 543 aa23.2■■□□□ 1.3
SNF8-216ENST00000573795 CACNA1EQ15878 2313 aa23.2■■□□□ 1.3
SNF8-216ENST00000573795 C1QTNF9BB2RNN3 333 aa23.19■■□□□ 1.3
SNF8-216ENST00000573795 C1QTNF9P0C862 333 aa23.19■■□□□ 1.3
SNF8-216ENST00000573795 TYRP14679 529 aa23.19■■□□□ 1.3
SNF8-216ENST00000573795 LMAN2Q12907 356 aa23.19■■□□□ 1.3
SNF8-216ENST00000573795 BYSLQ13895 437 aaKnown RBP23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms