RNA–Protein interactions for RNA: ENST00000573108.1

TRIM25-207, Transcript of tripartite motif containing 25, humanhuman

TSL 3

Gene TRIM25, Length 952 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-207ENST00000573108 WASP42768 502 aa12.78□□□□□ -0.36
TRIM25-207ENST00000573108 SLC5A3P53794 718 aa12.78□□□□□ -0.36
TRIM25-207ENST00000573108 GAD2Q05329 585 aa12.78□□□□□ -0.36
TRIM25-207ENST00000573108 LMAN2Q12907 356 aa12.78□□□□□ -0.36
TRIM25-207ENST00000573108 HECTD3Q5T447 861 aa12.78□□□□□ -0.36
TRIM25-207ENST00000573108 LYSMD4Q5XG99 296 aa12.78□□□□□ -0.36
TRIM25-207ENST00000573108 SCARA5Q6ZMJ2 495 aa12.78□□□□□ -0.36
TRIM25-207ENST00000573108 FAM35AQ86V20 835 aa12.78□□□□□ -0.36
TRIM25-207ENST00000573108 TMEM25Q86YD3 366 aa12.78□□□□□ -0.36
TRIM25-207ENST00000573108 MIB1Q86YT6 1006 aa12.78□□□□□ -0.36
TRIM25-207ENST00000573108 ZNF513Q8N8E2 541 aaPredicted RBP12.78□□□□□ -0.36
TRIM25-207ENST00000573108 PDZD8Q8NEN9 1154 aa12.78□□□□□ -0.36
TRIM25-207ENST00000573108 OVCA2Q8WZ82 227 aa12.78□□□□□ -0.36
TRIM25-207ENST00000573108 GATA6Q92908 595 aa12.78□□□□□ -0.36
TRIM25-207ENST00000573108 ERLEC1Q96DZ1 483 aa12.78□□□□□ -0.36
TRIM25-207ENST00000573108 MED10Q9BTT4 135 aa12.78□□□□□ -0.36
TRIM25-207ENST00000573108 SDCBP2Q9H190 292 aa12.78□□□□□ -0.36
TRIM25-207ENST00000573108 GMIPQ9P107 970 aa12.78□□□□□ -0.36
TRIM25-207ENST00000573108 PILRBQ9UKJ0 227 aa12.78□□□□□ -0.36
TRIM25-207ENST00000573108 SH3BP1Q9Y3L3 701 aa12.78□□□□□ -0.36
TRIM25-207ENST00000573108 PCDH15Q96QU1 1955 aa12.78□□□□□ -0.36
TRIM25-207ENST00000573108 PKD1L2Q7Z442 2459 aa12.78□□□□□ -0.36
TRIM25-207ENST00000573108 SPAARA0A1B0GVQ0 90 aa12.77□□□□□ -0.37
TRIM25-207ENST00000573108 HOXC11O43248 304 aaPredicted RBP12.77□□□□□ -0.37
TRIM25-207ENST00000573108 RHOBTB3O94955 611 aa12.77□□□□□ -0.37
TRIM25-207ENST00000573108 GABRG2P18507 467 aa12.77□□□□□ -0.37
TRIM25-207ENST00000573108 SNRPFP62306 86 aaKnown RBP12.77□□□□□ -0.37
TRIM25-207ENST00000573108 ORC1Q13415 861 aa12.77□□□□□ -0.37
TRIM25-207ENST00000573108 PNOCQ13519 176 aa12.77□□□□□ -0.37
TRIM25-207ENST00000573108 ANO4Q32M45 955 aa12.77□□□□□ -0.37
TRIM25-207ENST00000573108 C10orf76Q5T2E6 689 aa12.77□□□□□ -0.37
TRIM25-207ENST00000573108 SNX30Q5VWJ9 437 aa12.77□□□□□ -0.37
TRIM25-207ENST00000573108 PEAR1Q5VY43 1037 aaPredicted RBP12.77□□□□□ -0.37
TRIM25-207ENST00000573108 SLC23A3Q6PIS1 610 aa12.77□□□□□ -0.37
TRIM25-207ENST00000573108 TERB1Q8NA31 727 aa12.77□□□□□ -0.37
TRIM25-207ENST00000573108 ZMIZ2Q8NF64 920 aa12.77□□□□□ -0.37
TRIM25-207ENST00000573108 OTUB2Q96DC9 234 aa12.77□□□□□ -0.37
TRIM25-207ENST00000573108 KCTD10Q9H3F6 313 aa12.77□□□□□ -0.37
TRIM25-207ENST00000573108 SPHK2Q9NRA0 654 aa12.77□□□□□ -0.37
TRIM25-207ENST00000573108 IL37Q9NZH6 218 aa12.77□□□□□ -0.37
TRIM25-207ENST00000573108 CHMP5Q9NZZ3 219 aa12.77□□□□□ -0.37
TRIM25-207ENST00000573108 CALCOCO1Q9P1Z2 691 aa12.77□□□□□ -0.37
TRIM25-207ENST00000573108 DEC1Q9P2X7 70 aa12.77□□□□□ -0.37
TRIM25-207ENST00000573108 UBE4BO95155 1302 aa12.77□□□□□ -0.37
TRIM25-207ENST00000573108 CACNA1EQ15878 2313 aa12.77□□□□□ -0.37
TRIM25-207ENST00000573108 MYH10P35580 1976 aa12.76□□□□□ -0.37
TRIM25-207ENST00000573108 A0A1W2PQF6 199 aa12.76□□□□□ -0.37
TRIM25-207ENST00000573108 HYAL3O43820 417 aaPredicted RBP12.76□□□□□ -0.37
TRIM25-207ENST00000573108 PHACTR2O75167 634 aa12.76□□□□□ -0.37
TRIM25-207ENST00000573108 BEST1O76090 585 aa12.76□□□□□ -0.37
TRIM25-207ENST00000573108 CFIP05156 583 aa12.76□□□□□ -0.37
TRIM25-207ENST00000573108 ZDHHC11BP0C7U3 371 aa12.76□□□□□ -0.37
TRIM25-207ENST00000573108 CCDC130P13994 396 aa12.76□□□□□ -0.37
TRIM25-207ENST00000573108 HOXB2P14652 356 aa12.76□□□□□ -0.37
TRIM25-207ENST00000573108 ATICP31939 592 aa12.76□□□□□ -0.37
TRIM25-207ENST00000573108 ANP32AP39687 249 aaKnown RBP12.76□□□□□ -0.37
TRIM25-207ENST00000573108 RPL6Q02878 288 aaKnown RBP12.76□□□□□ -0.37
TRIM25-207ENST00000573108 ZNF699Q32M78 642 aa12.76□□□□□ -0.37
TRIM25-207ENST00000573108 SPDYCQ5MJ68 293 aa12.76□□□□□ -0.37
TRIM25-207ENST00000573108 BTBD8Q5XKL5 378 aa12.76□□□□□ -0.37
TRIM25-207ENST00000573108 EGFLAMQ63HQ2 1017 aa12.76□□□□□ -0.37
TRIM25-207ENST00000573108 PIP4P1Q86T03 277 aa12.76□□□□□ -0.37
TRIM25-207ENST00000573108 ACOT1Q86TX2 421 aa12.76□□□□□ -0.37
TRIM25-207ENST00000573108 C12orf56Q8IXR9 622 aa12.76□□□□□ -0.37
TRIM25-207ENST00000573108 FUKQ8N0W3 1084 aa12.76□□□□□ -0.37
TRIM25-207ENST00000573108 OR2I1PQ8NGU4 316 aa12.76□□□□□ -0.37
TRIM25-207ENST00000573108 ERCC4Q92889 916 aaPredicted RBP12.76□□□□□ -0.37
TRIM25-207ENST00000573108 SYAP1Q96A49 352 aaPredicted RBP12.76□□□□□ -0.37
TRIM25-207ENST00000573108 SMARCD1Q96GM5 515 aa12.76□□□□□ -0.37
TRIM25-207ENST00000573108 ACOX2Q99424 681 aa12.76□□□□□ -0.37
TRIM25-207ENST00000573108 SMOQ99835 787 aa12.76□□□□□ -0.37
TRIM25-207ENST00000573108 GTPBP2Q9BX10 602 aaKnown RBP12.76□□□□□ -0.37
TRIM25-207ENST00000573108 DMAP1Q9NPF5 467 aaPredicted RBP12.76□□□□□ -0.37
TRIM25-207ENST00000573108 KRT82Q9NSB4 513 aa12.76□□□□□ -0.37
TRIM25-207ENST00000573108 DMAC2Q9NW81 257 aa12.76□□□□□ -0.37
TRIM25-207ENST00000573108 MAPK8IP1Q9UQF2 711 aa12.76□□□□□ -0.37
TRIM25-207ENST00000573108 PCNX2A6NKB5 2137 aa12.76□□□□□ -0.37
TRIM25-207ENST00000573108 BAHCC1Q9P281 2608 aa12.75□□□□□ -0.37
TRIM25-207ENST00000573108 FAM92AA1XBS5 289 aa12.75□□□□□ -0.37
TRIM25-207ENST00000573108 LRRIQ3A6PVS8 624 aaPredicted RBP12.75□□□□□ -0.37
TRIM25-207ENST00000573108 AP5Z1O43299 807 aa12.75□□□□□ -0.37
TRIM25-207ENST00000573108 ATP8B3O60423 1300 aa12.75□□□□□ -0.37
TRIM25-207ENST00000573108 GREM1O60565 184 aa12.75□□□□□ -0.37
TRIM25-207ENST00000573108 EXOC3O60645 756 aa12.75□□□□□ -0.37
TRIM25-207ENST00000573108 AP1G2O75843 785 aa12.75□□□□□ -0.37
TRIM25-207ENST00000573108 CLSTN1O94985 981 aa12.75□□□□□ -0.37
TRIM25-207ENST00000573108 VNN1O95497 513 aa12.75□□□□□ -0.37
TRIM25-207ENST00000573108 TBX18O95935 607 aa12.75□□□□□ -0.37
TRIM25-207ENST00000573108 TUBP50607 506 aa12.75□□□□□ -0.37
TRIM25-207ENST00000573108 FAM193AP78312 1265 aa12.75□□□□□ -0.37
TRIM25-207ENST00000573108 SEMA3BQ13214 749 aa12.75□□□□□ -0.37
TRIM25-207ENST00000573108 BIRC3Q13489 604 aa12.75□□□□□ -0.37
TRIM25-207ENST00000573108 BYSLQ13895 437 aaKnown RBP12.75□□□□□ -0.37
TRIM25-207ENST00000573108 ZNF667Q5HYK9 610 aa12.75□□□□□ -0.37
TRIM25-207ENST00000573108 KCNV2Q8TDN2 545 aa12.75□□□□□ -0.37
TRIM25-207ENST00000573108 PARD3BQ8TEW8 1205 aa12.75□□□□□ -0.37
TRIM25-207ENST00000573108 SLC32A1Q9H598 525 aa12.75□□□□□ -0.37
TRIM25-207ENST00000573108 VRTNQ9H8Y1 702 aa12.75□□□□□ -0.37
TRIM25-207ENST00000573108 CD248Q9HCU0 757 aa12.75□□□□□ -0.37
TRIM25-207ENST00000573108 CD93Q9NPY3 652 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms