RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 FANCEQ9HB96 536 aa5.3□□□□□ -1.56
TOPBP1-210ENST00000572787 ABCB8Q9NUT2 735 aa5.3□□□□□ -1.56
TOPBP1-210ENST00000572787 PSD3Q9NYI0 1048 aa5.3□□□□□ -1.56
TOPBP1-210ENST00000572787 FETUBQ9UGM5 382 aa5.3□□□□□ -1.56
TOPBP1-210ENST00000572787 FBXO40Q9UH90 709 aa5.3□□□□□ -1.56
TOPBP1-210ENST00000572787 PCDHA1Q9Y5I3 950 aa5.3□□□□□ -1.56
TOPBP1-210ENST00000572787 CDY2AQ9Y6F7 541 aa5.3□□□□□ -1.56
TOPBP1-210ENST00000572787 RNF123Q5XPI4 1314 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 ARHGEF37A1IGU5 675 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 SYCE3A1L190 88 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 DCDC2BA2VCK2 349 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 URADA6NGE7 173 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 TMEM232C9JQI7 657 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 FAM86B1E9PN63 330 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 H0YIV9 168 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 BTN3A1O00481 513 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 VWA5AO00534 786 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 TNPO2O14787 897 aaKnown RBP5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 CD3EAPO15446 510 aaKnown RBP5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 PRPF4O43172 522 aaKnown RBP eCLIP5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 SIGLEC6O43699 453 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 SPOPO43791 374 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 PDE8BO95263 885 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 YEATS4O95619 227 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 ASGR1P07306 291 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 TPBGLP0DKB5 382 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 KRT5P13647 590 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 CSF2RAP15509 400 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 SMPD1P17405 629 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 SFPQP23246 707 aaKnown RBP eCLIP5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 LORP23490 312 aaPredicted RBP5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 CPT2P23786 658 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 SDHAP31040 664 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 NTF4P34130 210 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 ARL1P40616 181 aaPredicted RBP5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 MAGEA4P43358 317 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 ARCN1P48444 511 aaKnown RBP5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 DIO1P49895 249 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 STAT5BP51692 787 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 GBX2P52951 348 aaPredicted RBP5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 CDC42EP1Q00587 391 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 ID3Q02535 119 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 PTSQ03393 145 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 MGAT2Q10469 447 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 TEFQ10587 303 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 SLC13A2Q13183 592 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 LAPTM5Q13571 262 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 CAPSQ13938 189 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 NFIXQ14938 502 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 PKN1Q16512 942 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 MYLK3Q32MK0 819 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 TDRD12Q587J7 1177 aaKnown RBP5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 SPDYCQ5MJ68 293 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 TEX35Q5T0J7 233 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 TMTC4Q5T4D3 741 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 AADACL4Q5VUY2 407 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 SHEQ5VZ18 495 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 EEF1DP3Q658K8 133 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 CENPPQ6IPU0 288 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 RCSD1Q6JBY9 416 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 ZYG11AQ6WRX3 759 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 SYNE3Q6ZMZ3 975 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 MIER3Q7Z3K6 550 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 RAB44Q7Z6P3 723 aaPredicted RBP5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 SYCP3Q8IZU3 236 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 NLGN4XQ8N0W4 816 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 SIX6OS1Q8N1H7 587 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 FBXW8Q8N3Y1 598 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 CELF5Q8N6W0 485 aaKnown RBP5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 ANKS4BQ8N8V4 417 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 POC5Q8NA72 575 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 HIPK4Q8NE63 616 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 DNAJB8Q8NHS0 232 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 POMGNT1Q8WZA1 660 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 CFHR4Q92496 578 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 STAMQ92783 540 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 SGF29Q96ES7 293 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 MRGPRX2Q96LB1 330 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 DMRTA2Q96SC8 542 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 ABHD1Q96SE0 405 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 AGAP2Q99490 1192 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 LBHD1Q9BQE6 289 aaPredicted RBP5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 NAA11Q9BSU3 229 aaPredicted RBP5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 NACAP1Q9BZK3 213 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 FOXQ1Q9C009 403 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 TRIM7Q9C029 511 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 PCDHAC1Q9H158 963 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 CHST8Q9H2A9 424 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 MRPL46Q9H2W6 279 aaKnown RBP5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 EHD1Q9H4M9 534 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 SMURF2Q9HAU4 748 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 MBNL1Q9NR56 388 aaKnown RBP5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 GLRX2Q9NS18 164 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 CHST7Q9NS84 486 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 TDP1Q9NUW8 608 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 INTS13Q9NVM9 706 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 DNAJB12Q9NXW2 375 aaKnown RBP5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 CLDND1Q9NY35 253 aa5.29□□□□□ -1.56
TOPBP1-210ENST00000572787 EHD2Q9NZN4 543 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms