RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 SH3BP1Q9Y3L3 701 aa19.12■□□□□ 0.65
CHD3-214ENST00000572579 USP3Q9Y6I4 520 aa19.12■□□□□ 0.65
CHD3-214ENST00000572579 MYOFQ9NZM1 2061 aa19.12■□□□□ 0.65
CHD3-214ENST00000572579 HOXC11O43248 304 aaPredicted RBP19.11■□□□□ 0.65
CHD3-214ENST00000572579 TULP3O75386 442 aa19.11■□□□□ 0.65
CHD3-214ENST00000572579 KLF8O95600 359 aaPredicted RBP19.11■□□□□ 0.65
CHD3-214ENST00000572579 ADH1CP00326 375 aa19.11■□□□□ 0.65
CHD3-214ENST00000572579 GRIA2P42262 883 aa19.11■□□□□ 0.65
CHD3-214ENST00000572579 RAD23BP54727 409 aa19.11■□□□□ 0.65
CHD3-214ENST00000572579 ANO7Q6IWH7 933 aa19.11■□□□□ 0.65
CHD3-214ENST00000572579 SLC4A11Q8NBS3 891 aa19.11■□□□□ 0.65
CHD3-214ENST00000572579 OLIG1Q8TAK6 271 aa19.11■□□□□ 0.65
CHD3-214ENST00000572579 OTUB2Q96DC9 234 aa19.11■□□□□ 0.65
CHD3-214ENST00000572579 DUSP16Q9BY84 665 aa19.11■□□□□ 0.65
CHD3-214ENST00000572579 TLR8Q9NR97 1041 aaKnown RBP19.11■□□□□ 0.65
CHD3-214ENST00000572579 SPHK2Q9NRA0 654 aa19.11■□□□□ 0.65
CHD3-214ENST00000572579 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.11■□□□□ 0.65
CHD3-214ENST00000572579 PCDHA5Q9Y5H7 936 aa19.11■□□□□ 0.65
CHD3-214ENST00000572579 HELZP42694 1942 aaKnown RBP19.11■□□□□ 0.65
CHD3-214ENST00000572579 KLKB1P03952 638 aa19.1■□□□□ 0.65
CHD3-214ENST00000572579 RARGP13631 454 aa19.1■□□□□ 0.65
CHD3-214ENST00000572579 TNFRSF4P43489 277 aa19.1■□□□□ 0.65
CHD3-214ENST00000572579 GAD2Q05329 585 aa19.1■□□□□ 0.65
CHD3-214ENST00000572579 RLN3Q8WXF3 142 aa19.1■□□□□ 0.65
CHD3-214ENST00000572579 CNOT6LQ96LI5 555 aaKnown RBP19.1■□□□□ 0.65
CHD3-214ENST00000572579 CISHQ9NSE2 258 aa19.1■□□□□ 0.65
CHD3-214ENST00000572579 RAB20Q9NX57 234 aa19.1■□□□□ 0.65
CHD3-214ENST00000572579 ABCA7Q8IZY2 2146 aa19.1■□□□□ 0.65
CHD3-214ENST00000572579 EML5Q05BV3 1969 aa19.1■□□□□ 0.65
CHD3-214ENST00000572579 TRIM49BA6NDI0 452 aa19.09■□□□□ 0.65
CHD3-214ENST00000572579 APODP05090 189 aa19.09■□□□□ 0.65
CHD3-214ENST00000572579 ATP5C1P36542 298 aaKnown RBP19.09■□□□□ 0.65
CHD3-214ENST00000572579 MPLP40238 635 aa19.09■□□□□ 0.65
CHD3-214ENST00000572579 COBLL1Q53SF7 1204 aa19.09■□□□□ 0.65
CHD3-214ENST00000572579 ZNF658Q5TYW1 1059 aaPredicted RBP19.09■□□□□ 0.65
CHD3-214ENST00000572579 Q6ZNB5 142 aa19.09■□□□□ 0.65
CHD3-214ENST00000572579 FBXL13Q8NEE6 735 aa19.09■□□□□ 0.65
CHD3-214ENST00000572579 HEXIM2Q96MH2 286 aaKnown RBP19.09■□□□□ 0.65
CHD3-214ENST00000572579 CD248Q9HCU0 757 aa19.09■□□□□ 0.65
CHD3-214ENST00000572579 PNPLA8Q9NP80 782 aa19.09■□□□□ 0.65
CHD3-214ENST00000572579 COQ4Q9Y3A0 265 aa19.09■□□□□ 0.65
CHD3-214ENST00000572579 PCDHGA5Q9Y5G8 931 aa19.09■□□□□ 0.65
CHD3-214ENST00000572579 MYO16Q9Y6X6 1858 aa19.09■□□□□ 0.65
CHD3-214ENST00000572579 BCLAF3A2AJT9 711 aaKnown RBP19.08■□□□□ 0.64
CHD3-214ENST00000572579 TBC1D3BA6NDS4 549 aa19.08■□□□□ 0.64
CHD3-214ENST00000572579 TULP2O00295 520 aa19.08■□□□□ 0.64
CHD3-214ENST00000572579 CETN3O15182 167 aa19.08■□□□□ 0.64
CHD3-214ENST00000572579 CISD3P0C7P0 127 aa19.08■□□□□ 0.64
CHD3-214ENST00000572579 CD44P16070 742 aaKnown RBP19.08■□□□□ 0.64
CHD3-214ENST00000572579 BMP6P22004 513 aa19.08■□□□□ 0.64
CHD3-214ENST00000572579 MXI1P50539 228 aa19.08■□□□□ 0.64
CHD3-214ENST00000572579 ANO4Q32M45 955 aa19.08■□□□□ 0.64
CHD3-214ENST00000572579 KLHDC10Q6PID8 442 aa19.08■□□□□ 0.64
CHD3-214ENST00000572579 TTC30AQ86WT1 665 aa19.08■□□□□ 0.64
CHD3-214ENST00000572579 CCDC26Q8TAB7 109 aa19.08■□□□□ 0.64
CHD3-214ENST00000572579 NDRG1Q92597 394 aaKnown RBP19.08■□□□□ 0.64
CHD3-214ENST00000572579 TMEM176AQ96HP8 235 aa19.08■□□□□ 0.64
CHD3-214ENST00000572579 GSDMAQ96QA5 445 aa19.08■□□□□ 0.64
CHD3-214ENST00000572579 ACOX2Q99424 681 aa19.08■□□□□ 0.64
CHD3-214ENST00000572579 IMPG2Q9BZV3 1241 aa19.08■□□□□ 0.64
CHD3-214ENST00000572579 NACA2Q9H009 215 aa19.08■□□□□ 0.64
CHD3-214ENST00000572579 MBD1Q9UIS9 605 aaPredicted RBP19.08■□□□□ 0.64
CHD3-214ENST00000572579 TPRP12270 2363 aaKnown RBP19.08■□□□□ 0.64
CHD3-214ENST00000572579 CNOT1A5YKK6 2376 aaKnown RBP19.07■□□□□ 0.64
CHD3-214ENST00000572579 PRRT4C9JH25 899 aa19.07■□□□□ 0.64
CHD3-214ENST00000572579 PMS2CLQ68D20 193 aa19.07■□□□□ 0.64
CHD3-214ENST00000572579 ARHGAP17Q68EM7 881 aa19.07■□□□□ 0.64
CHD3-214ENST00000572579 ISM2Q6H9L7 571 aa19.07■□□□□ 0.64
CHD3-214ENST00000572579 TPGS1Q6ZTW0 290 aa19.07■□□□□ 0.64
CHD3-214ENST00000572579 TOGARAM2Q6ZUX3 1019 aa19.07■□□□□ 0.64
CHD3-214ENST00000572579 BHLHA9Q7RTU4 235 aa19.07■□□□□ 0.64
CHD3-214ENST00000572579 CCDC186Q7Z3E2 898 aa19.07■□□□□ 0.64
CHD3-214ENST00000572579 UBR7Q8N806 425 aa19.07■□□□□ 0.64
CHD3-214ENST00000572579 DEC1Q9P2X7 70 aa19.07■□□□□ 0.64
CHD3-214ENST00000572579 KIAA1549LQ6ZVL6 1849 aa19.07■□□□□ 0.64
CHD3-214ENST00000572579 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.06■□□□□ 0.64
CHD3-214ENST00000572579 GABBR2O75899 941 aa19.06■□□□□ 0.64
CHD3-214ENST00000572579 STC2O76061 302 aa19.06■□□□□ 0.64
CHD3-214ENST00000572579 EPB41P11171 864 aaKnown RBP19.06■□□□□ 0.64
CHD3-214ENST00000572579 LIMK1P53667 647 aa19.06■□□□□ 0.64
CHD3-214ENST00000572579 CREB5Q02930 508 aa19.06■□□□□ 0.64
CHD3-214ENST00000572579 MAP7D1Q3KQU3 841 aa19.06■□□□□ 0.64
CHD3-214ENST00000572579 AASDHQ4L235 1098 aaPredicted RBP19.06■□□□□ 0.64
CHD3-214ENST00000572579 USP39Q53GS9 565 aaKnown RBP19.06■□□□□ 0.64
CHD3-214ENST00000572579 PPM1JQ5JR12 505 aa19.06■□□□□ 0.64
CHD3-214ENST00000572579 RAB41Q5JT25 222 aa19.06■□□□□ 0.64
CHD3-214ENST00000572579 C10orf120Q5SQS8 335 aa19.06■□□□□ 0.64
CHD3-214ENST00000572579 STPG1Q5TH74 334 aa19.06■□□□□ 0.64
CHD3-214ENST00000572579 PIGZQ86VD9 579 aa19.06■□□□□ 0.64
CHD3-214ENST00000572579 ZNF276Q8N554 614 aa19.06■□□□□ 0.64
CHD3-214ENST00000572579 TERB1Q8NA31 727 aa19.06■□□□□ 0.64
CHD3-214ENST00000572579 SLC35C1Q96A29 364 aa19.06■□□□□ 0.64
CHD3-214ENST00000572579 FAXDC2Q96IV6 333 aa19.06■□□□□ 0.64
CHD3-214ENST00000572579 MARK1Q9P0L2 795 aa19.06■□□□□ 0.64
CHD3-214ENST00000572579 DNMT3LQ9UJW3 386 aa19.06■□□□□ 0.64
CHD3-214ENST00000572579 NAGPAQ9UK23 515 aa19.06■□□□□ 0.64
CHD3-214ENST00000572579 SPAG17Q6Q759 2223 aa19.05■□□□□ 0.64
CHD3-214ENST00000572579 A0A1W2PQF6 199 aa19.05■□□□□ 0.64
CHD3-214ENST00000572579 PATE3B3GLJ2 98 aa19.05■□□□□ 0.64
CHD3-214ENST00000572579 NEDD8-MDP1E9PL57 170 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms