RNA–Protein interactions for RNA: ENST00000572525.5

CHMP6-203, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-203ENST00000572525 AGAP1Q9UPQ3 857 aa10.78□□□□□ -0.68
CHMP6-203ENST00000572525 ANKRD63C9JTQ0 380 aa10.77□□□□□ -0.69
CHMP6-203ENST00000572525 TLX3O43711 291 aaPredicted RBP10.77□□□□□ -0.69
CHMP6-203ENST00000572525 FAM13AO94988 1023 aa10.77□□□□□ -0.69
CHMP6-203ENST00000572525 ITGB3P05106 788 aa10.77□□□□□ -0.69
CHMP6-203ENST00000572525 FAM163BP0C2L3 166 aa10.77□□□□□ -0.69
CHMP6-203ENST00000572525 BDNFP23560 247 aa10.77□□□□□ -0.69
CHMP6-203ENST00000572525 MAOBP27338 520 aa10.77□□□□□ -0.69
CHMP6-203ENST00000572525 GRIA4P48058 902 aa10.77□□□□□ -0.69
CHMP6-203ENST00000572525 CCT8P50990 548 aa10.77□□□□□ -0.69
CHMP6-203ENST00000572525 RHDQ02161 417 aa10.77□□□□□ -0.69
CHMP6-203ENST00000572525 TAF10Q12962 218 aa10.77□□□□□ -0.69
CHMP6-203ENST00000572525 STARD3Q14849 445 aa10.77□□□□□ -0.69
CHMP6-203ENST00000572525 IL17AQ16552 155 aa10.77□□□□□ -0.69
CHMP6-203ENST00000572525 SOWAHAQ2M3V2 549 aa10.77□□□□□ -0.69
CHMP6-203ENST00000572525 DCAF12L1Q5VU92 463 aa10.77□□□□□ -0.69
CHMP6-203ENST00000572525 TDRD10Q5VZ19 366 aaKnown RBP10.77□□□□□ -0.69
CHMP6-203ENST00000572525 PCSK4Q6UW60 755 aa10.77□□□□□ -0.69
CHMP6-203ENST00000572525 SPRYD3Q8NCJ5 442 aa10.77□□□□□ -0.69
CHMP6-203ENST00000572525 MYCBPAPQ8TBZ2 947 aa10.77□□□□□ -0.69
CHMP6-203ENST00000572525 SCFD1Q8WVM8 642 aa10.77□□□□□ -0.69
CHMP6-203ENST00000572525 KBTBD7Q8WVZ9 684 aa10.77□□□□□ -0.69
CHMP6-203ENST00000572525 MYLPFQ96A32 169 aa10.77□□□□□ -0.69
CHMP6-203ENST00000572525 CDK5RAP3Q96JB5 506 aa10.77□□□□□ -0.69
CHMP6-203ENST00000572525 NUP58Q9BVL2 599 aa10.77□□□□□ -0.69
CHMP6-203ENST00000572525 GPR174Q9BXC1 333 aa10.77□□□□□ -0.69
CHMP6-203ENST00000572525 CD93Q9NPY3 652 aa10.77□□□□□ -0.69
CHMP6-203ENST00000572525 CRTAC1Q9NQ79 661 aa10.77□□□□□ -0.69
CHMP6-203ENST00000572525 SMPD4Q9NXE4 827 aa10.77□□□□□ -0.69
CHMP6-203ENST00000572525 WDR35Q9P2L0 1181 aa10.77□□□□□ -0.69
CHMP6-203ENST00000572525 BTBD3Q9Y2F9 522 aa10.77□□□□□ -0.69
CHMP6-203ENST00000572525 SH3BP1Q9Y3L3 701 aa10.77□□□□□ -0.69
CHMP6-203ENST00000572525 SNX9Q9Y5X1 595 aa10.77□□□□□ -0.69
CHMP6-203ENST00000572525 FAM149AA5PLN7 773 aa10.76□□□□□ -0.69
CHMP6-203ENST00000572525 F8VP50 259 aa10.76□□□□□ -0.69
CHMP6-203ENST00000572525 PLK4O00444 970 aa10.76□□□□□ -0.69
CHMP6-203ENST00000572525 ARHGAP6O43182 974 aa10.76□□□□□ -0.69
CHMP6-203ENST00000572525 RTN3O95197 1032 aaPredicted RBP10.76□□□□□ -0.69
CHMP6-203ENST00000572525 LDHAP00338 332 aaKnown RBP10.76□□□□□ -0.69
CHMP6-203ENST00000572525 WARSP23381 471 aaKnown RBP10.76□□□□□ -0.69
CHMP6-203ENST00000572525 WASP42768 502 aa10.76□□□□□ -0.69
CHMP6-203ENST00000572525 TOB1P50616 345 aaPredicted RBP10.76□□□□□ -0.69
CHMP6-203ENST00000572525 RBP5P82980 135 aa10.76□□□□□ -0.69
CHMP6-203ENST00000572525 TEAD4Q15561 434 aa10.76□□□□□ -0.69
CHMP6-203ENST00000572525 CCDC142Q17RM4 750 aa10.76□□□□□ -0.69
CHMP6-203ENST00000572525 PKDCCQ504Y2 493 aa10.76□□□□□ -0.69
CHMP6-203ENST00000572525 KIAA1324Q6UXG2 1013 aaKnown RBP10.76□□□□□ -0.69
CHMP6-203ENST00000572525 HTR3DQ70Z44 454 aa10.76□□□□□ -0.69
CHMP6-203ENST00000572525 TMEM25Q86YD3 366 aa10.76□□□□□ -0.69
CHMP6-203ENST00000572525 BBS7Q8IWZ6 715 aa10.76□□□□□ -0.69
CHMP6-203ENST00000572525 MYCT1Q8N699 235 aa10.76□□□□□ -0.69
CHMP6-203ENST00000572525 NAT16Q8N8M0 369 aa10.76□□□□□ -0.69
CHMP6-203ENST00000572525 PCED1BQ96HM7 432 aa10.76□□□□□ -0.69
CHMP6-203ENST00000572525 ACOX2Q99424 681 aa10.76□□□□□ -0.69
CHMP6-203ENST00000572525 LLPHQ9BRT6 129 aaKnown RBP10.76□□□□□ -0.69
CHMP6-203ENST00000572525 ELOVL4Q9GZR5 314 aa10.76□□□□□ -0.69
CHMP6-203ENST00000572525 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.76□□□□□ -0.69
CHMP6-203ENST00000572525 DNAJC17Q9NVM6 304 aaKnown RBP10.76□□□□□ -0.69
CHMP6-203ENST00000572525 COMMD8Q9NX08 183 aa10.76□□□□□ -0.69
CHMP6-203ENST00000572525 IL37Q9NZH6 218 aa10.76□□□□□ -0.69
CHMP6-203ENST00000572525 FBXO10Q9UK96 956 aa10.76□□□□□ -0.69
CHMP6-203ENST00000572525 SLC27A6Q9Y2P4 619 aa10.76□□□□□ -0.69
CHMP6-203ENST00000572525 SPTAN1Q13813 2472 aaKnown RBP10.75□□□□□ -0.69
CHMP6-203ENST00000572525 NYNRINQ9P2P1 1898 aaKnown RBP10.75□□□□□ -0.69
CHMP6-203ENST00000572525 FAM92AA1XBS5 289 aa10.75□□□□□ -0.69
CHMP6-203ENST00000572525 PRRT4C9JH25 899 aa10.75□□□□□ -0.69
CHMP6-203ENST00000572525 COCHO43405 550 aa10.75□□□□□ -0.69
CHMP6-203ENST00000572525 PPP1R37O75864 691 aa10.75□□□□□ -0.69
CHMP6-203ENST00000572525 ZDHHC11BP0C7U3 371 aa10.75□□□□□ -0.69
CHMP6-203ENST00000572525 ADSSP30520 456 aa10.75□□□□□ -0.69
CHMP6-203ENST00000572525 TPMTP51580 245 aa10.75□□□□□ -0.69
CHMP6-203ENST00000572525 FOSBP53539 338 aa10.75□□□□□ -0.69
CHMP6-203ENST00000572525 UCNP55089 124 aa10.75□□□□□ -0.69
CHMP6-203ENST00000572525 HMGN5P82970 282 aaKnown RBP10.75□□□□□ -0.69
CHMP6-203ENST00000572525 TFAMQ00059 246 aaKnown RBP10.75□□□□□ -0.69
CHMP6-203ENST00000572525 GUCY1B3Q02153 619 aa10.75□□□□□ -0.69
CHMP6-203ENST00000572525 TLE3Q04726 772 aa10.75□□□□□ -0.69
CHMP6-203ENST00000572525 MYO1EQ12965 1108 aa10.75□□□□□ -0.69
CHMP6-203ENST00000572525 GNL2Q13823 731 aaKnown RBP10.75□□□□□ -0.69
CHMP6-203ENST00000572525 ANO4Q32M45 955 aa10.75□□□□□ -0.69
CHMP6-203ENST00000572525 FUT11Q495W5 492 aa10.75□□□□□ -0.69
CHMP6-203ENST00000572525 HECTD3Q5T447 861 aa10.75□□□□□ -0.69
CHMP6-203ENST00000572525 ARL6IP4Q66PJ3 421 aaKnown RBP10.75□□□□□ -0.69
CHMP6-203ENST00000572525 DHRS13Q6UX07 377 aa10.75□□□□□ -0.69
CHMP6-203ENST00000572525 GPBP1Q86WP2 473 aa10.75□□□□□ -0.69
CHMP6-203ENST00000572525 POMGNT1Q8WZA1 660 aa10.75□□□□□ -0.69
CHMP6-203ENST00000572525 FGF11Q92914 225 aa10.75□□□□□ -0.69
CHMP6-203ENST00000572525 AK8Q96MA6 479 aa10.75□□□□□ -0.69
CHMP6-203ENST00000572525 MKRN2Q9H000 416 aaKnown RBP10.75□□□□□ -0.69
CHMP6-203ENST00000572525 MIR1-1HGQ9H1L0 117 aa10.75□□□□□ -0.69
CHMP6-203ENST00000572525 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.75□□□□□ -0.695e-8■■■■■ 122.9
CHMP6-203ENST00000572525 FTSJ1Q9UET6 329 aa10.75□□□□□ -0.69
CHMP6-203ENST00000572525 EIF2B4Q9UI10 523 aaKnown RBP10.75□□□□□ -0.69
CHMP6-203ENST00000572525 SIX4Q9UIU6 781 aa10.75□□□□□ -0.69
CHMP6-203ENST00000572525 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.75□□□□□ -0.69
CHMP6-203ENST00000572525 NPHP3-ACAD11A0A0J9YXS1 232 aa10.74□□□□□ -0.69
CHMP6-203ENST00000572525 A0A1B0GVT2 93 aa10.74□□□□□ -0.69
CHMP6-203ENST00000572525 KCNJ18B7U540 433 aa10.74□□□□□ -0.69
CHMP6-203ENST00000572525 B8ZZF3 427 aa10.74□□□□□ -0.69
CHMP6-203ENST00000572525 SCAMP3O14828 347 aaKnown RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms