RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 CT47A1Q5JQC4 288 aaPredicted RBP10.76□□□□□ -0.69
GTF3C1-213ENST00000571886 C10orf120Q5SQS8 335 aa10.76□□□□□ -0.69
GTF3C1-213ENST00000571886 CCDC183Q5T5S1 534 aa10.76□□□□□ -0.69
GTF3C1-213ENST00000571886 DENND1BQ6P3S1 775 aa10.76□□□□□ -0.69
GTF3C1-213ENST00000571886 CPA6Q8N4T0 437 aa10.76□□□□□ -0.69
GTF3C1-213ENST00000571886 CLEC4CQ8WTT0 213 aa10.76□□□□□ -0.69
GTF3C1-213ENST00000571886 ZNF606Q8WXB4 792 aa10.76□□□□□ -0.69
GTF3C1-213ENST00000571886 KCTD13Q8WZ19 329 aa10.76□□□□□ -0.69
GTF3C1-213ENST00000571886 ATP2A3Q93084 1043 aa10.76□□□□□ -0.69
GTF3C1-213ENST00000571886 MSANTD3Q96H12 275 aa10.76□□□□□ -0.69
GTF3C1-213ENST00000571886 DNAI2Q9GZS0 605 aa10.76□□□□□ -0.69
GTF3C1-213ENST00000571886 HSD3B7Q9H2F3 369 aa10.76□□□□□ -0.69
GTF3C1-213ENST00000571886 FANCLQ9NW38 375 aa10.76□□□□□ -0.69
GTF3C1-213ENST00000571886 HESX1Q9UBX0 185 aa10.76□□□□□ -0.69
GTF3C1-213ENST00000571886 APEX2Q9UBZ4 518 aa10.76□□□□□ -0.69
GTF3C1-213ENST00000571886 CYTH4Q9UIA0 394 aa10.76□□□□□ -0.69
GTF3C1-213ENST00000571886 DNAJC12Q9UKB3 198 aa10.76□□□□□ -0.69
GTF3C1-213ENST00000571886 R4GN57 208 aa10.76□□□□□ -0.69
GTF3C1-213ENST00000571886 MYO18AQ92614 2054 aaKnown RBP10.75□□□□□ -0.69
GTF3C1-213ENST00000571886 KIAA1549LQ6ZVL6 1849 aa10.75□□□□□ -0.69
GTF3C1-213ENST00000571886 YJEFN3A6XGL0 299 aa10.75□□□□□ -0.69
GTF3C1-213ENST00000571886 E7ENQ6 273 aa10.75□□□□□ -0.69
GTF3C1-213ENST00000571886 FOXN3O00409 490 aaPredicted RBP10.75□□□□□ -0.69
GTF3C1-213ENST00000571886 LAMTOR5O43504 91 aa10.75□□□□□ -0.69
GTF3C1-213ENST00000571886 LETM1O95202 739 aaPredicted RBP10.75□□□□□ -0.69
GTF3C1-213ENST00000571886 MBD3O95983 291 aa10.75□□□□□ -0.69
GTF3C1-213ENST00000571886 ZBED1O96006 694 aa10.75□□□□□ -0.69
GTF3C1-213ENST00000571886 KLKB1P03952 638 aa10.75□□□□□ -0.69
GTF3C1-213ENST00000571886 HMBSP08397 361 aa10.75□□□□□ -0.69
GTF3C1-213ENST00000571886 TDGF1P13385 188 aa10.75□□□□□ -0.69
GTF3C1-213ENST00000571886 HOXD11P31277 338 aaPredicted RBP10.75□□□□□ -0.69
GTF3C1-213ENST00000571886 NBL1P41271 181 aa10.75□□□□□ -0.69
GTF3C1-213ENST00000571886 GPD2P43304 727 aa10.75□□□□□ -0.69
GTF3C1-213ENST00000571886 KLK7P49862 253 aa10.75□□□□□ -0.69
GTF3C1-213ENST00000571886 MRE11P49959 708 aa10.75□□□□□ -0.69
GTF3C1-213ENST00000571886 MFAP3P55082 362 aa10.75□□□□□ -0.69
GTF3C1-213ENST00000571886 YWHAGP61981 247 aaKnown RBP eCLIP10.75□□□□□ -0.69
GTF3C1-213ENST00000571886 DMWDQ09019 674 aa10.75□□□□□ -0.69
GTF3C1-213ENST00000571886 NCAPHQ15003 741 aa10.75□□□□□ -0.69
GTF3C1-213ENST00000571886 LY6G5CQ5SRR4 150 aa10.75□□□□□ -0.69
GTF3C1-213ENST00000571886 CDKAL1Q5VV42 579 aa10.75□□□□□ -0.69
GTF3C1-213ENST00000571886 SASS6Q6UVJ0 657 aa10.75□□□□□ -0.69
GTF3C1-213ENST00000571886 HTR3DQ70Z44 454 aa10.75□□□□□ -0.69
GTF3C1-213ENST00000571886 TMEM25Q86YD3 366 aa10.75□□□□□ -0.69
GTF3C1-213ENST00000571886 MIB1Q86YT6 1006 aa10.75□□□□□ -0.69
GTF3C1-213ENST00000571886 FAM114A1Q8IWE2 563 aa10.75□□□□□ -0.69
GTF3C1-213ENST00000571886 ZNF276Q8N554 614 aa10.75□□□□□ -0.69
GTF3C1-213ENST00000571886 SHC3Q92529 594 aa10.75□□□□□ -0.69
GTF3C1-213ENST00000571886 CD101Q93033 1021 aa10.75□□□□□ -0.69
GTF3C1-213ENST00000571886 P2RY13Q9BPV8 354 aa10.75□□□□□ -0.69
GTF3C1-213ENST00000571886 NACA2Q9H009 215 aa10.75□□□□□ -0.69
GTF3C1-213ENST00000571886 IRF2BPLQ9H1B7 796 aa10.75□□□□□ -0.69
GTF3C1-213ENST00000571886 VPS16Q9H269 839 aa10.75□□□□□ -0.69
GTF3C1-213ENST00000571886 LRRC4Q9HBW1 653 aa10.75□□□□□ -0.69
GTF3C1-213ENST00000571886 PRMT8Q9NR22 394 aaPredicted RBP10.75□□□□□ -0.69
GTF3C1-213ENST00000571886 CLIC5Q9NZA1 410 aa10.75□□□□□ -0.69
GTF3C1-213ENST00000571886 TJP2Q9UDY2 1190 aa10.75□□□□□ -0.69
GTF3C1-213ENST00000571886 RASAL2Q9UJF2 1139 aa10.75□□□□□ -0.69
GTF3C1-213ENST00000571886 DNMT3LQ9UJW3 386 aa10.75□□□□□ -0.69
GTF3C1-213ENST00000571886 SH3BP1Q9Y3L3 701 aa10.75□□□□□ -0.69
GTF3C1-213ENST00000571886 USP34Q70CQ2 3546 aa10.74□□□□□ -0.69
GTF3C1-213ENST00000571886 TRIM24O15164 1050 aa10.74□□□□□ -0.69
GTF3C1-213ENST00000571886 THAP12O43422 761 aa10.74□□□□□ -0.69
GTF3C1-213ENST00000571886 STC2O76061 302 aa10.74□□□□□ -0.69
GTF3C1-213ENST00000571886 NFATC1O95644 943 aa10.74□□□□□ -0.69
GTF3C1-213ENST00000571886 SETSIPP0DME0 302 aa10.74□□□□□ -0.69
GTF3C1-213ENST00000571886 RALAP11233 206 aa10.74□□□□□ -0.69
GTF3C1-213ENST00000571886 CLCN1P35523 988 aa10.74□□□□□ -0.69
GTF3C1-213ENST00000571886 USP8P40818 1118 aa10.74□□□□□ -0.69
GTF3C1-213ENST00000571886 MAGEA9P43362 315 aa10.74□□□□□ -0.69
GTF3C1-213ENST00000571886 DAOAP59103 153 aa10.74□□□□□ -0.69
GTF3C1-213ENST00000571886 TYRO3Q06418 890 aa10.74□□□□□ -0.69
GTF3C1-213ENST00000571886 EFEMP1Q12805 493 aa10.74□□□□□ -0.69
GTF3C1-213ENST00000571886 GRSF1Q12849 480 aaKnown RBP eCLIP10.74□□□□□ -0.69
GTF3C1-213ENST00000571886 KRT31Q15323 416 aa10.74□□□□□ -0.69
GTF3C1-213ENST00000571886 DGKKQ5KSL6 1271 aa10.74□□□□□ -0.69
GTF3C1-213ENST00000571886 KLHDC7AQ5VTJ3 777 aa10.74□□□□□ -0.69
GTF3C1-213ENST00000571886 BSPRYQ5W0U4 402 aa10.74□□□□□ -0.69
GTF3C1-213ENST00000571886 CAVIN1Q6NZI2 390 aaKnown RBP10.74□□□□□ -0.69
GTF3C1-213ENST00000571886 KLHDC10Q6PID8 442 aa10.74□□□□□ -0.69
GTF3C1-213ENST00000571886 C1orf228Q6PIY5 440 aa10.74□□□□□ -0.69
GTF3C1-213ENST00000571886 Q6ZNB5 142 aa10.74□□□□□ -0.69
GTF3C1-213ENST00000571886 ASCL5Q7RTU5 278 aa10.74□□□□□ -0.69
GTF3C1-213ENST00000571886 DDX42Q86XP3 938 aaKnown RBP eCLIP10.74□□□□□ -0.69
GTF3C1-213ENST00000571886 WDTC1Q8N5D0 677 aa10.74□□□□□ -0.69
GTF3C1-213ENST00000571886 KIAA1958Q8N8K9 716 aa10.74□□□□□ -0.69
GTF3C1-213ENST00000571886 NAT16Q8N8M0 369 aa10.74□□□□□ -0.69
GTF3C1-213ENST00000571886 EDEM1Q92611 657 aa10.74□□□□□ -0.69
GTF3C1-213ENST00000571886 MIS12Q9H081 205 aa10.74□□□□□ -0.69
GTF3C1-213ENST00000571886 ANO10Q9NW15 660 aa10.74□□□□□ -0.69
GTF3C1-213ENST00000571886 SFMBT1Q9UHJ3 866 aa10.74□□□□□ -0.69
GTF3C1-213ENST00000571886 FHOD1Q9Y613 1164 aa10.74□□□□□ -0.69
GTF3C1-213ENST00000571886 SLC12A8A0AV02 714 aa10.73□□□□□ -0.69
GTF3C1-213ENST00000571886 PROB1E7EW31 1015 aa10.73□□□□□ -0.69
GTF3C1-213ENST00000571886 K7EQS6 105 aa10.73□□□□□ -0.69
GTF3C1-213ENST00000571886 K7ESF4 209 aa10.73□□□□□ -0.69
GTF3C1-213ENST00000571886 PES1O00541 588 aaKnown RBP10.73□□□□□ -0.69
GTF3C1-213ENST00000571886 SLC9A3R1O14745 358 aaPredicted RBP10.73□□□□□ -0.69
GTF3C1-213ENST00000571886 EPHB6O15197 1021 aa10.73□□□□□ -0.69
GTF3C1-213ENST00000571886 RNF40O75150 1001 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms