RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 RBMS1P29558 406 aaKnown RBP7.44□□□□□ -1.22
CHD3-213ENST00000571249 ATP1A2P50993 1020 aa7.44□□□□□ -1.22
CHD3-213ENST00000571249 TPMTP51580 245 aa7.44□□□□□ -1.22
CHD3-213ENST00000571249 MCCD1P59942 119 aaPredicted RBP7.44□□□□□ -1.22
CHD3-213ENST00000571249 RPL10AP62906 217 aaKnown RBP7.44□□□□□ -1.22
CHD3-213ENST00000571249 TAGLNQ01995 201 aaKnown RBP7.44□□□□□ -1.22
CHD3-213ENST00000571249 RESTQ13127 1097 aa7.44□□□□□ -1.22
CHD3-213ENST00000571249 PPP2R5CQ13362 524 aa7.44□□□□□ -1.22
CHD3-213ENST00000571249 EPHA7Q15375 998 aa7.44□□□□□ -1.22
CHD3-213ENST00000571249 TEAD4Q15561 434 aa7.44□□□□□ -1.22
CHD3-213ENST00000571249 RTN1Q16799 776 aa7.44□□□□□ -1.22
CHD3-213ENST00000571249 PROX2Q3B8N5 592 aa7.44□□□□□ -1.22
CHD3-213ENST00000571249 SLC39A12Q504Y0 691 aa7.44□□□□□ -1.22
CHD3-213ENST00000571249 SDHAF4Q5VUM1 108 aa7.44□□□□□ -1.22
CHD3-213ENST00000571249 CDCA2Q69YH5 1023 aaPredicted RBP7.44□□□□□ -1.22
CHD3-213ENST00000571249 DESI1Q6ICB0 168 aa7.44□□□□□ -1.22
CHD3-213ENST00000571249 OVOS1Q6IE37 1185 aa7.44□□□□□ -1.22
CHD3-213ENST00000571249 FOXR1Q6PIV2 292 aa7.44□□□□□ -1.22
CHD3-213ENST00000571249 DSTYKQ6XUX3 929 aa7.44□□□□□ -1.22
CHD3-213ENST00000571249 KANSL1Q7Z3B3 1105 aa7.44□□□□□ -1.22
CHD3-213ENST00000571249 FILIP1Q7Z7B0 1213 aa7.44□□□□□ -1.22
CHD3-213ENST00000571249 FAM124AQ86V42 546 aa7.44□□□□□ -1.22
CHD3-213ENST00000571249 ATCAYQ86WG3 371 aa7.44□□□□□ -1.22
CHD3-213ENST00000571249 TPH2Q8IWU9 490 aa7.44□□□□□ -1.22
CHD3-213ENST00000571249 TBCKQ8TEA7 893 aa7.44□□□□□ -1.22
CHD3-213ENST00000571249 FUCA2Q9BTY2 467 aa7.44□□□□□ -1.22
CHD3-213ENST00000571249 CCDC94Q9BW85 323 aaPredicted RBP7.44□□□□□ -1.22
CHD3-213ENST00000571249 OSBPL2Q9H1P3 480 aa7.44□□□□□ -1.22
CHD3-213ENST00000571249 ZSWIM4Q9H7M6 989 aa7.44□□□□□ -1.22
CHD3-213ENST00000571249 TMEM206Q9H813 350 aa7.44□□□□□ -1.22
CHD3-213ENST00000571249 ITM2CQ9NQX7 267 aa7.44□□□□□ -1.22
CHD3-213ENST00000571249 DONSONQ9NYP3 566 aa7.44□□□□□ -1.22
CHD3-213ENST00000571249 DCTN4Q9UJW0 460 aa7.44□□□□□ -1.22
CHD3-213ENST00000571249 ANAPC2Q9UJX6 822 aa7.44□□□□□ -1.22
CHD3-213ENST00000571249 DENND4CQ5VZ89 1909 aa7.44□□□□□ -1.22
CHD3-213ENST00000571249 ANK1P16157 1881 aa7.43□□□□□ -1.22
CHD3-213ENST00000571249 CYP3A7-CYP3A51PA0A087WV96 503 aa7.43□□□□□ -1.22
CHD3-213ENST00000571249 C2orf78A6NCI8 922 aa7.43□□□□□ -1.22
CHD3-213ENST00000571249 CDRT15L2A8MXV6 281 aa7.43□□□□□ -1.22
CHD3-213ENST00000571249 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.43□□□□□ -1.22
CHD3-213ENST00000571249 SMAPO00193 183 aa7.43□□□□□ -1.22
CHD3-213ENST00000571249 LUC7L3O95232 432 aaKnown RBP7.43□□□□□ -1.22
CHD3-213ENST00000571249 NUDT7P0C024 238 aa7.43□□□□□ -1.22
CHD3-213ENST00000571249 HAPLN1P10915 354 aaPredicted RBP7.43□□□□□ -1.22
CHD3-213ENST00000571249 ATP2B1P20020 1258 aa7.43□□□□□ -1.22
CHD3-213ENST00000571249 CYP3A7P24462 503 aa7.43□□□□□ -1.22
CHD3-213ENST00000571249 EIF2DP41214 584 aaKnown RBP7.43□□□□□ -1.22
CHD3-213ENST00000571249 GRM5P41594 1212 aa7.43□□□□□ -1.22
CHD3-213ENST00000571249 GRIA4P48058 902 aa7.43□□□□□ -1.22
CHD3-213ENST00000571249 GPR15P49685 360 aa7.43□□□□□ -1.22
CHD3-213ENST00000571249 ATP2C1P98194 919 aaPredicted RBP7.43□□□□□ -1.22
CHD3-213ENST00000571249 C10orf76Q5T2E6 689 aa7.43□□□□□ -1.22
CHD3-213ENST00000571249 TTC22Q5TAA0 569 aa7.43□□□□□ -1.22
CHD3-213ENST00000571249 NT5DC1Q5TFE4 455 aa7.43□□□□□ -1.22
CHD3-213ENST00000571249 ATF7IP2Q5U623 682 aa7.43□□□□□ -1.22
CHD3-213ENST00000571249 CAPRIN2Q6IMN6 1127 aaKnown RBP7.43□□□□□ -1.22
CHD3-213ENST00000571249 SDE2Q6IQ49 451 aa7.43□□□□□ -1.22
CHD3-213ENST00000571249 CACUL1Q86Y37 369 aa7.43□□□□□ -1.22
CHD3-213ENST00000571249 CHPFQ8IZ52 775 aa7.43□□□□□ -1.22
CHD3-213ENST00000571249 OR10T2Q8NGX3 314 aa7.43□□□□□ -1.22
CHD3-213ENST00000571249 BICD2Q8TD16 824 aa7.43□□□□□ -1.22
CHD3-213ENST00000571249 PIGOQ8TEQ8 1089 aa7.43□□□□□ -1.22
CHD3-213ENST00000571249 CCDC12Q8WUD4 166 aaPredicted RBP7.43□□□□□ -1.22
CHD3-213ENST00000571249 ELF4Q99607 663 aaPredicted RBP7.43□□□□□ -1.22
CHD3-213ENST00000571249 MKRN2Q9H000 416 aaKnown RBP7.43□□□□□ -1.22
CHD3-213ENST00000571249 C2orf40Q9H1Z8 148 aa7.43□□□□□ -1.22
CHD3-213ENST00000571249 UPF2Q9HAU5 1272 aaKnown RBP7.43□□□□□ -1.22
CHD3-213ENST00000571249 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.43□□□□□ -1.22
CHD3-213ENST00000571249 GCNT4Q9P109 453 aa7.43□□□□□ -1.22
CHD3-213ENST00000571249 USP36Q9P275 1121 aaKnown RBP7.43□□□□□ -1.22
CHD3-213ENST00000571249 DOCK9Q9BZ29 2069 aa7.43□□□□□ -1.22
CHD3-213ENST00000571249 CSPG4Q6UVK1 2322 aa7.43□□□□□ -1.22
CHD3-213ENST00000571249 ACANP16112 2415 aa7.42□□□□□ -1.22
CHD3-213ENST00000571249 A0A087WWV3 80 aa7.42□□□□□ -1.22
CHD3-213ENST00000571249 OPA1O60313 960 aa7.42□□□□□ -1.22
CHD3-213ENST00000571249 USO1O60763 962 aaKnown RBP7.42□□□□□ -1.22
CHD3-213ENST00000571249 SLITRK3O94933 977 aa7.42□□□□□ -1.22
CHD3-213ENST00000571249 RARGP13631 454 aa7.42□□□□□ -1.22
CHD3-213ENST00000571249 GSPT1P15170 499 aaKnown RBP7.42□□□□□ -1.22
CHD3-213ENST00000571249 ACP1P24666 158 aa7.42□□□□□ -1.22
CHD3-213ENST00000571249 SCNN1AP37088 669 aa7.42□□□□□ -1.22
CHD3-213ENST00000571249 GRIK1P39086 918 aa7.42□□□□□ -1.22
CHD3-213ENST00000571249 DUSP3P51452 185 aaPredicted RBP7.42□□□□□ -1.22
CHD3-213ENST00000571249 E2F1Q01094 437 aa7.42□□□□□ -1.22
CHD3-213ENST00000571249 NCAPH2Q6IBW4 605 aa7.42□□□□□ -1.22
CHD3-213ENST00000571249 TAS1R3Q7RTX0 852 aa7.42□□□□□ -1.22
CHD3-213ENST00000571249 APBB1IPQ7Z5R6 666 aaPredicted RBP7.42□□□□□ -1.22
CHD3-213ENST00000571249 RETREG3Q86VR2 466 aa7.42□□□□□ -1.22
CHD3-213ENST00000571249 PLPP7Q8NBV4 271 aa7.42□□□□□ -1.22
CHD3-213ENST00000571249 DEPTORQ8TB45 409 aa7.42□□□□□ -1.22
CHD3-213ENST00000571249 BSNDQ8WZ55 320 aa7.42□□□□□ -1.22
CHD3-213ENST00000571249 ATXN7L3BQ96GX2 97 aa7.42□□□□□ -1.22
CHD3-213ENST00000571249 CCDC43Q96MW1 224 aaKnown RBP7.42□□□□□ -1.22
CHD3-213ENST00000571249 NACC1Q96RE7 527 aa7.42□□□□□ -1.22
CHD3-213ENST00000571249 GABRG3Q99928 467 aa7.42□□□□□ -1.22
CHD3-213ENST00000571249 ORAI3Q9BRQ5 295 aa7.42□□□□□ -1.22
CHD3-213ENST00000571249 ANP32EQ9BTT0 268 aa7.42□□□□□ -1.22
CHD3-213ENST00000571249 UNKQ9C0B0 810 aaKnown RBP7.42□□□□□ -1.22
CHD3-213ENST00000571249 CCDC113Q9H0I3 377 aa7.42□□□□□ -1.22
CHD3-213ENST00000571249 CNTN3Q9P232 1028 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms