RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 USP28Q96RU2 1077 aa20.1■□□□□ 0.81
SCARF1-204ENST00000570902 FBXO44Q9H4M3 255 aa20.1■□□□□ 0.81
SCARF1-204ENST00000570902 VRTNQ9H8Y1 702 aa20.1■□□□□ 0.81
SCARF1-204ENST00000570902 WDR35Q9P2L0 1181 aa20.1■□□□□ 0.81
SCARF1-204ENST00000570902 SUSD2Q9UGT4 822 aa20.1■□□□□ 0.81
SCARF1-204ENST00000570902 HCN2Q9UL51 889 aa20.1■□□□□ 0.81
SCARF1-204ENST00000570902 PKD1L2Q7Z442 2459 aa20.1■□□□□ 0.81
SCARF1-204ENST00000570902 CEP192Q8TEP8 1941 aa20.1■□□□□ 0.81
SCARF1-204ENST00000570902 PCDH15Q96QU1 1955 aa20.09■□□□□ 0.81
SCARF1-204ENST00000570902 CLIC2O15247 247 aa20.09■□□□□ 0.81
SCARF1-204ENST00000570902 CACNG3O60359 315 aa20.09■□□□□ 0.81
SCARF1-204ENST00000570902 TLR5O60602 858 aa20.09■□□□□ 0.81
SCARF1-204ENST00000570902 NDUFS2O75306 463 aa20.09■□□□□ 0.81
SCARF1-204ENST00000570902 CLSTN1O94985 981 aa20.09■□□□□ 0.81
SCARF1-204ENST00000570902 CD59P13987 128 aa20.09■□□□□ 0.81
SCARF1-204ENST00000570902 NDUFV2P19404 249 aa20.09■□□□□ 0.81
SCARF1-204ENST00000570902 SYT1P21579 422 aa20.09■□□□□ 0.81
SCARF1-204ENST00000570902 EGFLAMQ63HQ2 1017 aa20.09■□□□□ 0.81
SCARF1-204ENST00000570902 CNNM4Q6P4Q7 775 aa20.09■□□□□ 0.81
SCARF1-204ENST00000570902 HTR3DQ70Z44 454 aa20.09■□□□□ 0.81
SCARF1-204ENST00000570902 RAB44Q7Z6P3 723 aaPredicted RBP20.09■□□□□ 0.81
SCARF1-204ENST00000570902 MIB1Q86YT6 1006 aa20.09■□□□□ 0.81
SCARF1-204ENST00000570902 SLC41A1Q8IVJ1 513 aa20.09■□□□□ 0.81
SCARF1-204ENST00000570902 CHCHD4Q8N4Q1 142 aa20.09■□□□□ 0.81
SCARF1-204ENST00000570902 ZNF516Q92618 1163 aa20.09■□□□□ 0.81
SCARF1-204ENST00000570902 GABRG3Q99928 467 aa20.09■□□□□ 0.81
SCARF1-204ENST00000570902 SMYD3Q9H7B4 428 aa20.09■□□□□ 0.81
SCARF1-204ENST00000570902 CGNQ9P2M7 1197 aaKnown RBP20.09■□□□□ 0.81
SCARF1-204ENST00000570902 LSM7Q9UK45 103 aaKnown RBP20.09■□□□□ 0.81
SCARF1-204ENST00000570902 CYP8B1Q9UNU6 501 aa20.09■□□□□ 0.81
SCARF1-204ENST00000570902 ZFYVE26Q68DK2 2539 aa20.09■□□□□ 0.81
SCARF1-204ENST00000570902 NEDD8-MDP1E9PL57 170 aa20.08■□□□□ 0.81
SCARF1-204ENST00000570902 TRIM24O15164 1050 aa20.08■□□□□ 0.81
SCARF1-204ENST00000570902 AP1G2O75843 785 aa20.08■□□□□ 0.81
SCARF1-204ENST00000570902 GNSP15586 552 aa20.08■□□□□ 0.81
SCARF1-204ENST00000570902 AP3M2P53677 418 aa20.08■□□□□ 0.81
SCARF1-204ENST00000570902 FAM193AP78312 1265 aa20.08■□□□□ 0.81
SCARF1-204ENST00000570902 ZNF699Q32M78 642 aa20.08■□□□□ 0.81
SCARF1-204ENST00000570902 PLEKHG6Q3KR16 790 aa20.08■□□□□ 0.81
SCARF1-204ENST00000570902 ZNF667Q5HYK9 610 aa20.08■□□□□ 0.81
SCARF1-204ENST00000570902 PAQR9Q6ZVX9 377 aa20.08■□□□□ 0.81
SCARF1-204ENST00000570902 NELFCDQ8IXH7 590 aa20.08■□□□□ 0.81
SCARF1-204ENST00000570902 RGL4Q8IZJ4 473 aa20.08■□□□□ 0.81
SCARF1-204ENST00000570902 FOXJ1Q92949 421 aa20.08■□□□□ 0.81
SCARF1-204ENST00000570902 ZNF419Q96HQ0 510 aaPredicted RBP20.08■□□□□ 0.81
SCARF1-204ENST00000570902 BBS2Q9BXC9 721 aa20.08■□□□□ 0.81
SCARF1-204ENST00000570902 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.08■□□□□ 0.81
SCARF1-204ENST00000570902 TLR8Q9NR97 1041 aaKnown RBP20.08■□□□□ 0.81
SCARF1-204ENST00000570902 KRT82Q9NSB4 513 aa20.08■□□□□ 0.81
SCARF1-204ENST00000570902 MARK1Q9P0L2 795 aa20.08■□□□□ 0.81
SCARF1-204ENST00000570902 PCDHB9Q9Y5E1 797 aa20.08■□□□□ 0.81
SCARF1-204ENST00000570902 ADAMTS9Q9P2N4 1935 aa20.08■□□□□ 0.8
SCARF1-204ENST00000570902 MYO18AQ92614 2054 aaKnown RBP20.07■□□□□ 0.8
SCARF1-204ENST00000570902 TYRP14679 529 aa20.07■□□□□ 0.8
SCARF1-204ENST00000570902 CDH8P55286 799 aa20.07■□□□□ 0.8
SCARF1-204ENST00000570902 BIRC3Q13489 604 aa20.07■□□□□ 0.8
SCARF1-204ENST00000570902 STK38Q15208 465 aa20.07■□□□□ 0.8
SCARF1-204ENST00000570902 TRIP6Q15654 476 aaKnown RBP20.07■□□□□ 0.8
SCARF1-204ENST00000570902 E2F4Q16254 413 aa20.07■□□□□ 0.8
SCARF1-204ENST00000570902 WDR45BQ5MNZ6 344 aa20.07■□□□□ 0.8
SCARF1-204ENST00000570902 C12orf56Q8IXR9 622 aa20.07■□□□□ 0.8
SCARF1-204ENST00000570902 FUKQ8N0W3 1084 aa20.07■□□□□ 0.8
SCARF1-204ENST00000570902 IQUBQ8NA54 791 aa20.07■□□□□ 0.8
SCARF1-204ENST00000570902 WBP2Q969T9 261 aa20.07■□□□□ 0.8
SCARF1-204ENST00000570902 ACOX2Q99424 681 aa20.07■□□□□ 0.8
SCARF1-204ENST00000570902 GZF1Q9H116 711 aaPredicted RBP20.07■□□□□ 0.8
SCARF1-204ENST00000570902 ZSCAN16Q9H4T2 348 aaPredicted RBP20.07■□□□□ 0.8
SCARF1-204ENST00000570902 CD248Q9HCU0 757 aa20.07■□□□□ 0.8
SCARF1-204ENST00000570902 GON4LQ3T8J9 2241 aa20.07■□□□□ 0.8
SCARF1-204ENST00000570902 DMXL2Q8TDJ6 3036 aa20.07■□□□□ 0.8
SCARF1-204ENST00000570902 GFRA2O00451 464 aa20.06■□□□□ 0.8
SCARF1-204ENST00000570902 EXOC3O60645 756 aa20.06■□□□□ 0.8
SCARF1-204ENST00000570902 P4HA1P13674 534 aa20.06■□□□□ 0.8
SCARF1-204ENST00000570902 NASPP49321 788 aaPredicted RBP20.06■□□□□ 0.8
SCARF1-204ENST00000570902 CACNA1EQ15878 2313 aa20.06■□□□□ 0.8
SCARF1-204ENST00000570902 PROSER1Q86XN7 944 aa20.06■□□□□ 0.8
SCARF1-204ENST00000570902 OR2I1PQ8NGU4 316 aa20.06■□□□□ 0.8
SCARF1-204ENST00000570902 DHX58Q96C10 678 aa20.06■□□□□ 0.8
SCARF1-204ENST00000570902 C7orf25Q9BPX7 421 aa20.06■□□□□ 0.8
SCARF1-204ENST00000570902 KLF16Q9BXK1 252 aaPredicted RBP20.06■□□□□ 0.8
SCARF1-204ENST00000570902 ZDHHC5Q9C0B5 715 aa20.06■□□□□ 0.8
SCARF1-204ENST00000570902 CSNK1G1Q9HCP0 422 aa20.06■□□□□ 0.8
SCARF1-204ENST00000570902 SH3BP5O60239 455 aa20.05■□□□□ 0.8
SCARF1-204ENST00000570902 GREM1O60565 184 aa20.05■□□□□ 0.8
SCARF1-204ENST00000570902 ATP5C1P36542 298 aaKnown RBP20.05■□□□□ 0.8
SCARF1-204ENST00000570902 DGKGP49619 791 aa20.05■□□□□ 0.8
SCARF1-204ENST00000570902 NCOA4Q13772 614 aa20.05■□□□□ 0.8
SCARF1-204ENST00000570902 BMT2Q1RMZ1 405 aa20.05■□□□□ 0.8
SCARF1-204ENST00000570902 SCARA5Q6ZMJ2 495 aa20.05■□□□□ 0.8
SCARF1-204ENST00000570902 TPGS1Q6ZTW0 290 aa20.05■□□□□ 0.8
SCARF1-204ENST00000570902 UNC13DQ70J99 1090 aa20.05■□□□□ 0.8
SCARF1-204ENST00000570902 ACOT1Q86TX2 421 aa20.05■□□□□ 0.8
SCARF1-204ENST00000570902 MRGPRX1Q96LB2 322 aa20.05■□□□□ 0.8
SCARF1-204ENST00000570902 SMOQ99835 787 aa20.05■□□□□ 0.8
SCARF1-204ENST00000570902 MAGEF1Q9HAY2 307 aa20.05■□□□□ 0.8
SCARF1-204ENST00000570902 CYLDQ9NQC7 956 aa20.05■□□□□ 0.8
SCARF1-204ENST00000570902 RAD54BQ9Y620 910 aa20.05■□□□□ 0.8
SCARF1-204ENST00000570902 PRRT4C9JH25 899 aa20.04■□□□□ 0.8
SCARF1-204ENST00000570902 GJB3O75712 270 aa20.04■□□□□ 0.8
SCARF1-204ENST00000570902 TRIM21P19474 475 aaKnown RBP20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms