RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 APOC4-APOC2K7ER74 178 aa15.98■□□□□ 0.15
SMG6-207ENST00000570756 CYB561D2O14569 222 aa15.98■□□□□ 0.15
SMG6-207ENST00000570756 CHADO15335 359 aa15.98■□□□□ 0.15
SMG6-207ENST00000570756 STAM2O75886 525 aa15.98■□□□□ 0.15
SMG6-207ENST00000570756 APOC2P02655 101 aa15.98■□□□□ 0.15
SMG6-207ENST00000570756 MYL4P12829 197 aa15.98■□□□□ 0.15
SMG6-207ENST00000570756 ACAT1P24752 427 aaKnown RBP15.98■□□□□ 0.15
SMG6-207ENST00000570756 HOXA10P31260 410 aaPredicted RBP15.98■□□□□ 0.15
SMG6-207ENST00000570756 CRHR1P34998 444 aa15.98■□□□□ 0.15
SMG6-207ENST00000570756 ALDH1A3P47895 512 aa15.98■□□□□ 0.15
SMG6-207ENST00000570756 SNAPC2Q13487 334 aa15.98■□□□□ 0.15
SMG6-207ENST00000570756 DCTN2Q13561 401 aaKnown RBP15.98■□□□□ 0.15
SMG6-207ENST00000570756 ZNF518BQ9C0D4 1074 aa15.98■□□□□ 0.15
SMG6-207ENST00000570756 APOBEC3GQ9HC16 384 aaKnown RBP15.98■□□□□ 0.15
SMG6-207ENST00000570756 RAB26Q9ULW5 256 aa15.98■□□□□ 0.15
SMG6-207ENST00000570756 LZTS1Q9Y250 596 aa15.98■□□□□ 0.15
SMG6-207ENST00000570756 INPP5FQ9Y2H2 1132 aa15.98■□□□□ 0.15
SMG6-207ENST00000570756 NPM3O75607 178 aaKnown RBP15.98■□□□□ 0.15
SMG6-207ENST00000570756 RBP3P10745 1247 aa15.98■□□□□ 0.15
SMG6-207ENST00000570756 PSMA2P25787 234 aa15.98■□□□□ 0.15
SMG6-207ENST00000570756 PMLP29590 882 aa15.98■□□□□ 0.15
SMG6-207ENST00000570756 ADARP55265 1226 aaKnown RBP15.98■□□□□ 0.15
SMG6-207ENST00000570756 CBLBQ13191 982 aa15.98■□□□□ 0.15
SMG6-207ENST00000570756 KCNJ11Q14654 390 aa15.98■□□□□ 0.15
SMG6-207ENST00000570756 TLR1Q15399 786 aa15.98■□□□□ 0.15
SMG6-207ENST00000570756 CNGA3Q16281 694 aa15.98■□□□□ 0.15
SMG6-207ENST00000570756 TAZQ16635 292 aa15.98■□□□□ 0.15
SMG6-207ENST00000570756 UGCGQ16739 394 aa15.98■□□□□ 0.15
SMG6-207ENST00000570756 TKFCQ3LXA3 575 aa15.98■□□□□ 0.15
SMG6-207ENST00000570756 NADK2Q4G0N4 442 aa15.98■□□□□ 0.15
SMG6-207ENST00000570756 AHI1Q8N157 1196 aa15.98■□□□□ 0.15
SMG6-207ENST00000570756 FBXW8Q8N3Y1 598 aa15.98■□□□□ 0.15
SMG6-207ENST00000570756 POU5F2Q8N7G0 328 aa15.98■□□□□ 0.15
SMG6-207ENST00000570756 HIPK4Q8NE63 616 aa15.98■□□□□ 0.15
SMG6-207ENST00000570756 SHKBP1Q8TBC3 707 aa15.98■□□□□ 0.15
SMG6-207ENST00000570756 DDI1Q8WTU0 396 aa15.98■□□□□ 0.15
SMG6-207ENST00000570756 KCNK16Q96T55 309 aa15.98■□□□□ 0.15
SMG6-207ENST00000570756 APOL6Q9BWW8 343 aa15.98■□□□□ 0.15
SMG6-207ENST00000570756 ANKRD31Q8N7Z5 1873 aa15.98■□□□□ 0.15
SMG6-207ENST00000570756 A0A0B4J269 797 aa15.97■□□□□ 0.15
SMG6-207ENST00000570756 CAPN8A6NHC0 703 aa15.97■□□□□ 0.15
SMG6-207ENST00000570756 SIN3BO75182 1162 aa15.97■□□□□ 0.15
SMG6-207ENST00000570756 VNN1O95497 513 aa15.97■□□□□ 0.15
SMG6-207ENST00000570756 KDELR1P24390 212 aa15.97■□□□□ 0.15
SMG6-207ENST00000570756 PRKCHP24723 683 aa15.97■□□□□ 0.15
SMG6-207ENST00000570756 ABCD1P33897 745 aa15.97■□□□□ 0.15
SMG6-207ENST00000570756 JAK3P52333 1124 aa15.97■□□□□ 0.15
SMG6-207ENST00000570756 SPP2Q13103 211 aa15.97■□□□□ 0.15
SMG6-207ENST00000570756 TUBB3Q13509 450 aa15.97■□□□□ 0.15
SMG6-207ENST00000570756 SMTNL2Q2TAL5 461 aa15.97■□□□□ 0.15
SMG6-207ENST00000570756 KBTBD6Q86V97 674 aa15.97■□□□□ 0.15
SMG6-207ENST00000570756 RFX6Q8HWS3 928 aa15.97■□□□□ 0.15
SMG6-207ENST00000570756 SP8Q8IXZ3 490 aa15.97■□□□□ 0.15
SMG6-207ENST00000570756 NDUFAF2Q8N183 169 aa15.97■□□□□ 0.15
SMG6-207ENST00000570756 CATSPER1Q8NEC5 780 aa15.97■□□□□ 0.15
SMG6-207ENST00000570756 DCUN1D1Q96GG9 259 aa15.97■□□□□ 0.15
SMG6-207ENST00000570756 CLMNQ96JQ2 1002 aa15.97■□□□□ 0.15
SMG6-207ENST00000570756 C20orf27Q9GZN8 174 aa15.97■□□□□ 0.15
SMG6-207ENST00000570756 HOMER2Q9NSB8 354 aa15.97■□□□□ 0.15
SMG6-207ENST00000570756 DDX18Q9NVP1 670 aaKnown RBP15.97■□□□□ 0.15
SMG6-207ENST00000570756 PPP1R1BQ9UD71 204 aaPredicted RBP15.97■□□□□ 0.15
SMG6-207ENST00000570756 ZC3H7BQ9UGR2 993 aaKnown RBP15.97■□□□□ 0.15
SMG6-207ENST00000570756 G3V3G9 751 aa15.97■□□□□ 0.15
SMG6-207ENST00000570756 FAM189A1O60320 539 aa15.97■□□□□ 0.15
SMG6-207ENST00000570756 TOM1L1O75674 476 aa15.97■□□□□ 0.15
SMG6-207ENST00000570756 L1CAMP32004 1257 aa15.97■□□□□ 0.15
SMG6-207ENST00000570756 ROR1Q01973 937 aa15.97■□□□□ 0.15
SMG6-207ENST00000570756 SLC25A11Q02978 314 aaKnown RBP15.97■□□□□ 0.15
SMG6-207ENST00000570756 MTMR1Q13613 665 aa15.97■□□□□ 0.15
SMG6-207ENST00000570756 KRT81Q14533 505 aa15.97■□□□□ 0.15
SMG6-207ENST00000570756 RARS2Q5T160 578 aaKnown RBP15.97■□□□□ 0.15
SMG6-207ENST00000570756 DCAF8Q5TAQ9 597 aa15.97■□□□□ 0.15
SMG6-207ENST00000570756 BORAQ6PGQ7 559 aa15.97■□□□□ 0.15
SMG6-207ENST00000570756 DENND5BQ6ZUT9 1274 aa15.97■□□□□ 0.15
SMG6-207ENST00000570756 DEFB107AQ8IZN7 70 aa15.97■□□□□ 0.15
SMG6-207ENST00000570756 LRRC43Q8N309 656 aa15.97■□□□□ 0.15
SMG6-207ENST00000570756 BSNDQ8WZ55 320 aa15.97■□□□□ 0.15
SMG6-207ENST00000570756 FAF2Q96CS3 445 aa15.97■□□□□ 0.15
SMG6-207ENST00000570756 RBM38Q9H0Z9 239 aaKnown RBP15.97■□□□□ 0.15
SMG6-207ENST00000570756 CYP4F11Q9HBI6 524 aa15.97■□□□□ 0.15
SMG6-207ENST00000570756 PSMD13Q9UNM6 376 aa15.97■□□□□ 0.15
SMG6-207ENST00000570756 LRRC37AA6NMS7 1700 aa15.96■□□□□ 0.15
SMG6-207ENST00000570756 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.96■□□□□ 0.15
SMG6-207ENST00000570756 H0YCG3 227 aa15.96■□□□□ 0.15
SMG6-207ENST00000570756 STK10O94804 968 aaKnown RBP15.96■□□□□ 0.15
SMG6-207ENST00000570756 C1QAP02745 245 aa15.96■□□□□ 0.15
SMG6-207ENST00000570756 CDK4P11802 303 aa15.96■□□□□ 0.15
SMG6-207ENST00000570756 LIG4P49917 911 aa15.96■□□□□ 0.15
SMG6-207ENST00000570756 SERPINB8P50452 374 aa15.96■□□□□ 0.15
SMG6-207ENST00000570756 MTMR2Q13614 643 aa15.96■□□□□ 0.15
SMG6-207ENST00000570756 TMEM126BQ8IUX1 230 aa15.96■□□□□ 0.15
SMG6-207ENST00000570756 MAP7D3Q8IWC1 876 aa15.96■□□□□ 0.15
SMG6-207ENST00000570756 PQLC1Q8N2U9 271 aa15.96■□□□□ 0.15
SMG6-207ENST00000570756 SPATA18Q8TC71 538 aa15.96■□□□□ 0.15
SMG6-207ENST00000570756 GRIP2Q9C0E4 1043 aa15.96■□□□□ 0.15
SMG6-207ENST00000570756 DEFB129Q9H1M3 183 aa15.96■□□□□ 0.15
SMG6-207ENST00000570756 ZNF696Q9H7X3 374 aa15.96■□□□□ 0.15
SMG6-207ENST00000570756 DNAJC16Q9Y2G8 782 aa15.96■□□□□ 0.15
SMG6-207ENST00000570756 WDR64B1ANS9 1081 aa15.96■□□□□ 0.15
SMG6-207ENST00000570756 H3BNX3 289 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms