RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 ABL1P00519 1130 aa6.9□□□□□ -1.3
CTDNEP1-204ENST00000570484 LTFP02788 710 aa6.9□□□□□ -1.3
CTDNEP1-204ENST00000570484 CYP1A2P05177 515 aa6.9□□□□□ -1.3
CTDNEP1-204ENST00000570484 HNRNPA1P09651 372 aaKnown RBP eCLIP6.9□□□□□ -1.3
CTDNEP1-204ENST00000570484 USP17L7P0C7H9 530 aa6.9□□□□□ -1.3
CTDNEP1-204ENST00000570484 SPATA31D3P0C874 917 aa6.9□□□□□ -1.3
CTDNEP1-204ENST00000570484 RALAP11233 206 aa6.9□□□□□ -1.3
CTDNEP1-204ENST00000570484 KRT3P12035 628 aa6.9□□□□□ -1.3
CTDNEP1-204ENST00000570484 EPCAMP16422 314 aa6.9□□□□□ -1.3
CTDNEP1-204ENST00000570484 HOXA9P31269 272 aa6.9□□□□□ -1.3
CTDNEP1-204ENST00000570484 SDC4P31431 198 aa6.9□□□□□ -1.3
CTDNEP1-204ENST00000570484 GABRB2P47870 512 aa6.9□□□□□ -1.3
CTDNEP1-204ENST00000570484 GSCP56915 257 aaPredicted RBP6.9□□□□□ -1.3
CTDNEP1-204ENST00000570484 DAOAP59103 153 aa6.9□□□□□ -1.3
CTDNEP1-204ENST00000570484 RNASE9P60153 205 aaKnown RBP6.9□□□□□ -1.3
CTDNEP1-204ENST00000570484 YWHAGP61981 247 aaKnown RBP eCLIP6.9□□□□□ -1.3
CTDNEP1-204ENST00000570484 MRPS5P82675 430 aaKnown RBP6.9□□□□□ -1.3
CTDNEP1-204ENST00000570484 SLC6A3Q01959 620 aa6.9□□□□□ -1.3
CTDNEP1-204ENST00000570484 DUSP6Q16828 381 aa6.9□□□□□ -1.3
CTDNEP1-204ENST00000570484 RAB41Q5JT25 222 aa6.9□□□□□ -1.3
CTDNEP1-204ENST00000570484 BTBD8Q5XKL5 378 aa6.9□□□□□ -1.3
CTDNEP1-204ENST00000570484 OLFML1Q6UWY5 402 aa6.9□□□□□ -1.3
CTDNEP1-204ENST00000570484 EP400NLQ6ZTU2 488 aa6.9□□□□□ -1.3
CTDNEP1-204ENST00000570484 SPATA31D4Q6ZUB0 917 aa6.9□□□□□ -1.3
CTDNEP1-204ENST00000570484 SLC26A9Q7LBE3 791 aa6.9□□□□□ -1.3
CTDNEP1-204ENST00000570484 GPRIN1Q7Z2K8 1008 aa6.9□□□□□ -1.3
CTDNEP1-204ENST00000570484 ADGRD2Q7Z7M1 963 aa6.9□□□□□ -1.3
CTDNEP1-204ENST00000570484 PHLDB2Q86SQ0 1253 aa6.9□□□□□ -1.3
CTDNEP1-204ENST00000570484 TMEM110Q86TL2 294 aa6.9□□□□□ -1.3
CTDNEP1-204ENST00000570484 DNAAF5Q86Y56 855 aa6.9□□□□□ -1.3
CTDNEP1-204ENST00000570484 SYCE1Q8N0S2 351 aa6.9□□□□□ -1.3
CTDNEP1-204ENST00000570484 CCAR2Q8N163 923 aaKnown RBP6.9□□□□□ -1.3
CTDNEP1-204ENST00000570484 WDTC1Q8N5D0 677 aa6.9□□□□□ -1.3
CTDNEP1-204ENST00000570484 ZNF511Q8NB15 262 aa6.9□□□□□ -1.3
CTDNEP1-204ENST00000570484 LEMD2Q8NC56 503 aa6.9□□□□□ -1.3
CTDNEP1-204ENST00000570484 STKLD1Q8NE28 680 aa6.9□□□□□ -1.3
CTDNEP1-204ENST00000570484 ZMIZ2Q8NF64 920 aa6.9□□□□□ -1.3
CTDNEP1-204ENST00000570484 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.9□□□□□ -1.3
CTDNEP1-204ENST00000570484 OLIG1Q8TAK6 271 aa6.9□□□□□ -1.3
CTDNEP1-204ENST00000570484 GPR152Q8TDT2 470 aa6.9□□□□□ -1.3
CTDNEP1-204ENST00000570484 RNF139Q8WU17 664 aa6.9□□□□□ -1.3
CTDNEP1-204ENST00000570484 HDAC7Q8WUI4 952 aa6.9□□□□□ -1.3
CTDNEP1-204ENST00000570484 OVCA2Q8WZ82 227 aa6.9□□□□□ -1.3
CTDNEP1-204ENST00000570484 CDK5RAP1Q96SZ6 601 aaKnown RBP6.9□□□□□ -1.3
CTDNEP1-204ENST00000570484 CRISPLD1Q9H336 500 aa6.9□□□□□ -1.3
CTDNEP1-204ENST00000570484 IGFLR1Q9H665 355 aa6.9□□□□□ -1.3
CTDNEP1-204ENST00000570484 FAM204AQ9H8W3 233 aa6.9□□□□□ -1.3
CTDNEP1-204ENST00000570484 SFXN1Q9H9B4 322 aa6.9□□□□□ -1.3
CTDNEP1-204ENST00000570484 PIDD1Q9HB75 910 aa6.9□□□□□ -1.3
CTDNEP1-204ENST00000570484 ASAH2Q9NR71 780 aa6.9□□□□□ -1.3
CTDNEP1-204ENST00000570484 TLR8Q9NR97 1041 aaKnown RBP6.9□□□□□ -1.3
CTDNEP1-204ENST00000570484 ASNSD1Q9NWL6 643 aa6.9□□□□□ -1.3
CTDNEP1-204ENST00000570484 COMMD8Q9NX08 183 aa6.9□□□□□ -1.3
CTDNEP1-204ENST00000570484 LMCD1Q9NZU5 365 aa6.9□□□□□ -1.3
CTDNEP1-204ENST00000570484 NENFQ9UMX5 172 aa6.9□□□□□ -1.3
CTDNEP1-204ENST00000570484 REXO2Q9Y3B8 237 aaKnown RBP6.9□□□□□ -1.3
CTDNEP1-204ENST00000570484 HCFC2Q9Y5Z7 792 aa6.9□□□□□ -1.3
CTDNEP1-204ENST00000570484 TMEM110-MUSTN1A8MSY1 372 aa6.89□□□□□ -1.31
CTDNEP1-204ENST00000570484 HHLA1C9JL84 531 aa6.89□□□□□ -1.31
CTDNEP1-204ENST00000570484 MYO1FO00160 1098 aa6.89□□□□□ -1.31
CTDNEP1-204ENST00000570484 RFXAPO00287 272 aa6.89□□□□□ -1.31
CTDNEP1-204ENST00000570484 PJA2O43164 708 aa6.89□□□□□ -1.31
CTDNEP1-204ENST00000570484 SPOPO43791 374 aa6.89□□□□□ -1.31
CTDNEP1-204ENST00000570484 GRAP2O75791 330 aa6.89□□□□□ -1.31
CTDNEP1-204ENST00000570484 MOCS3O95396 460 aa6.89□□□□□ -1.31
CTDNEP1-204ENST00000570484 VNN2O95498 520 aa6.89□□□□□ -1.31
CTDNEP1-204ENST00000570484 GLI1P08151 1106 aa6.89□□□□□ -1.31
CTDNEP1-204ENST00000570484 NCAM1P13591 858 aa6.89□□□□□ -1.31
CTDNEP1-204ENST00000570484 GPD1P21695 349 aa6.89□□□□□ -1.31
CTDNEP1-204ENST00000570484 PSMA2P25787 234 aa6.89□□□□□ -1.31
CTDNEP1-204ENST00000570484 CDC25CP30307 473 aa6.89□□□□□ -1.31
CTDNEP1-204ENST00000570484 SSR1P43307 286 aaKnown RBP6.89□□□□□ -1.31
CTDNEP1-204ENST00000570484 SULT1E1P49888 294 aa6.89□□□□□ -1.31
CTDNEP1-204ENST00000570484 YWHAZP63104 245 aaKnown RBP6.89□□□□□ -1.31
CTDNEP1-204ENST00000570484 SH3BP2P78314 561 aa6.89□□□□□ -1.31
CTDNEP1-204ENST00000570484 MAMLD1Q13495 774 aa6.89□□□□□ -1.31
CTDNEP1-204ENST00000570484 CAMK1Q14012 370 aa6.89□□□□□ -1.31
CTDNEP1-204ENST00000570484 ARHGAP15Q53QZ3 475 aa6.89□□□□□ -1.31
CTDNEP1-204ENST00000570484 ODF2Q5BJF6 829 aa6.89□□□□□ -1.31
CTDNEP1-204ENST00000570484 TCEAL5Q5H9L2 206 aa6.89□□□□□ -1.31
CTDNEP1-204ENST00000570484 ZFYVE27Q5T4F4 411 aa6.89□□□□□ -1.31
CTDNEP1-204ENST00000570484 PLEKHA7Q6IQ23 1121 aa6.89□□□□□ -1.31
CTDNEP1-204ENST00000570484 C11orf63Q6NUN7 778 aa6.89□□□□□ -1.31
CTDNEP1-204ENST00000570484 PDZD4Q76G19 769 aaPredicted RBP6.89□□□□□ -1.31
CTDNEP1-204ENST00000570484 SND1Q7KZF4 910 aaKnown RBP eCLIP6.89□□□□□ -1.31
CTDNEP1-204ENST00000570484 DAAM2Q86T65 1068 aa6.89□□□□□ -1.31
CTDNEP1-204ENST00000570484 SCML4Q8N228 414 aa6.89□□□□□ -1.31
CTDNEP1-204ENST00000570484 TRIM58Q8NG06 486 aa6.89□□□□□ -1.31
CTDNEP1-204ENST00000570484 SCAMP5Q8TAC9 235 aa6.89□□□□□ -1.31
CTDNEP1-204ENST00000570484 SLC35G2Q8TBE7 412 aa6.89□□□□□ -1.31
CTDNEP1-204ENST00000570484 FEZF2Q8TBJ5 459 aa6.89□□□□□ -1.31
CTDNEP1-204ENST00000570484 KIAA1524Q8TCG1 905 aa6.89□□□□□ -1.31
CTDNEP1-204ENST00000570484 CLEC4CQ8WTT0 213 aa6.89□□□□□ -1.31
CTDNEP1-204ENST00000570484 MRPS31Q92665 395 aaKnown RBP6.89□□□□□ -1.31
CTDNEP1-204ENST00000570484 PSMG2Q969U7 264 aa6.89□□□□□ -1.31
CTDNEP1-204ENST00000570484 ARHGEF26Q96DR7 871 aa6.89□□□□□ -1.31
CTDNEP1-204ENST00000570484 MCRS1Q96EZ8 462 aa6.89□□□□□ -1.31
CTDNEP1-204ENST00000570484 TRMT2BQ96GJ1 504 aaKnown RBP6.89□□□□□ -1.31
CTDNEP1-204ENST00000570484 FAM161BQ96MY7 647 aa6.89□□□□□ -1.31
CTDNEP1-204ENST00000570484 SLITRK6Q9H5Y7 841 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms