RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 GOLGA8DPQ0D2H9 430 aa18■□□□□ 0.47
MAP1LC3B-208ENST00000570189 SRSF5Q13243 272 aaKnown RBP18■□□□□ 0.47
MAP1LC3B-208ENST00000570189 CUL2Q13617 745 aa18■□□□□ 0.47
MAP1LC3B-208ENST00000570189 MORC3Q14149 939 aa18■□□□□ 0.47
MAP1LC3B-208ENST00000570189 CSRP2Q16527 193 aa18■□□□□ 0.47
MAP1LC3B-208ENST00000570189 DCAF17Q5H9S7 520 aaPredicted RBP18■□□□□ 0.47
MAP1LC3B-208ENST00000570189 TCERG1LQ5VWI1 586 aa18■□□□□ 0.47
MAP1LC3B-208ENST00000570189 TTI2Q6NXR4 508 aa18■□□□□ 0.47
MAP1LC3B-208ENST00000570189 CACNA2D4Q7Z3S7 1137 aa18■□□□□ 0.47
MAP1LC3B-208ENST00000570189 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18■□□□□ 0.47
MAP1LC3B-208ENST00000570189 RASSF3Q86WH2 238 aa18■□□□□ 0.47
MAP1LC3B-208ENST00000570189 C12orf40Q86WS4 652 aa18■□□□□ 0.47
MAP1LC3B-208ENST00000570189 BBS7Q8IWZ6 715 aa18■□□□□ 0.47
MAP1LC3B-208ENST00000570189 ANKRD52Q8NB46 1076 aa18■□□□□ 0.47
MAP1LC3B-208ENST00000570189 ERCC4Q92889 916 aaPredicted RBP18■□□□□ 0.47
MAP1LC3B-208ENST00000570189 TATDN2Q93075 761 aa18■□□□□ 0.47
MAP1LC3B-208ENST00000570189 HEXIM2Q96MH2 286 aaKnown RBP18■□□□□ 0.47
MAP1LC3B-208ENST00000570189 NMUR1Q9HB89 426 aa18■□□□□ 0.47
MAP1LC3B-208ENST00000570189 DNMT3LQ9UJW3 386 aa18■□□□□ 0.47
MAP1LC3B-208ENST00000570189 NUP205Q92621 2012 aa17.99■□□□□ 0.47
MAP1LC3B-208ENST00000570189 AXIN1O15169 862 aa17.99■□□□□ 0.47
MAP1LC3B-208ENST00000570189 APODP05090 189 aa17.99■□□□□ 0.47
MAP1LC3B-208ENST00000570189 CD44P16070 742 aaKnown RBP17.99■□□□□ 0.47
MAP1LC3B-208ENST00000570189 BMP6P22004 513 aa17.99■□□□□ 0.47
MAP1LC3B-208ENST00000570189 KIR2DL1P43626 348 aaPredicted RBP17.99■□□□□ 0.47
MAP1LC3B-208ENST00000570189 PLA2G4AP47712 749 aa17.99■□□□□ 0.47
MAP1LC3B-208ENST00000570189 FMO5P49326 533 aa17.99■□□□□ 0.47
MAP1LC3B-208ENST00000570189 MARSP56192 900 aaKnown RBP17.99■□□□□ 0.47
MAP1LC3B-208ENST00000570189 Q6ZNB5 142 aa17.99■□□□□ 0.47
MAP1LC3B-208ENST00000570189 CEP68Q76N32 757 aa17.99■□□□□ 0.47
MAP1LC3B-208ENST00000570189 SCD5Q86SK9 330 aa17.99■□□□□ 0.47
MAP1LC3B-208ENST00000570189 NACA2Q9H009 215 aa17.99■□□□□ 0.47
MAP1LC3B-208ENST00000570189 KIAA1257Q9ULG3 409 aa17.99■□□□□ 0.47
MAP1LC3B-208ENST00000570189 A0A1W2PQH9 124 aa17.98■□□□□ 0.47
MAP1LC3B-208ENST00000570189 BICDL2A1A5D9 508 aa17.98■□□□□ 0.47
MAP1LC3B-208ENST00000570189 PPP1R3GB7ZBB8 358 aa17.98■□□□□ 0.47
MAP1LC3B-208ENST00000570189 EPN2O95208 641 aa17.98■□□□□ 0.47
MAP1LC3B-208ENST00000570189 TBX18O95935 607 aa17.98■□□□□ 0.47
MAP1LC3B-208ENST00000570189 RARGP13631 454 aa17.98■□□□□ 0.47
MAP1LC3B-208ENST00000570189 SLC6A11P48066 632 aa17.98■□□□□ 0.47
MAP1LC3B-208ENST00000570189 ZNF394Q53GI3 561 aa17.98■□□□□ 0.47
MAP1LC3B-208ENST00000570189 PM20D1Q6GTS8 502 aa17.98■□□□□ 0.47
MAP1LC3B-208ENST00000570189 C11orf74Q86VG3 221 aa17.98■□□□□ 0.47
MAP1LC3B-208ENST00000570189 ARHGAP18Q8N392 663 aa17.98■□□□□ 0.47
MAP1LC3B-208ENST00000570189 WBP2Q969T9 261 aa17.98■□□□□ 0.47
MAP1LC3B-208ENST00000570189 CNOT6LQ96LI5 555 aaKnown RBP17.98■□□□□ 0.47
MAP1LC3B-208ENST00000570189 HHIPQ96QV1 700 aa17.98■□□□□ 0.47
MAP1LC3B-208ENST00000570189 SEMA4GQ9NTN9 838 aa17.98■□□□□ 0.47
MAP1LC3B-208ENST00000570189 LSM7Q9UK45 103 aaKnown RBP17.98■□□□□ 0.47
MAP1LC3B-208ENST00000570189 PCDHGA5Q9Y5G8 931 aa17.98■□□□□ 0.47
MAP1LC3B-208ENST00000570189 CACNG3O60359 315 aa17.97■□□□□ 0.47
MAP1LC3B-208ENST00000570189 TULP3O75386 442 aa17.97■□□□□ 0.47
MAP1LC3B-208ENST00000570189 RALAP11233 206 aa17.97■□□□□ 0.47
MAP1LC3B-208ENST00000570189 PXNP49023 591 aaPredicted RBP17.97■□□□□ 0.47
MAP1LC3B-208ENST00000570189 DGKEP52429 567 aa17.97■□□□□ 0.47
MAP1LC3B-208ENST00000570189 BCAT1P54687 386 aa17.97■□□□□ 0.47
MAP1LC3B-208ENST00000570189 SLC8A3P57103 927 aa17.97■□□□□ 0.47
MAP1LC3B-208ENST00000570189 SPEM2Q0P670 501 aa17.97■□□□□ 0.47
MAP1LC3B-208ENST00000570189 MESP2Q0VG99 397 aa17.97■□□□□ 0.47
MAP1LC3B-208ENST00000570189 CRY1Q16526 586 aa17.97■□□□□ 0.47
MAP1LC3B-208ENST00000570189 LPAL2Q16609 132 aa17.97■□□□□ 0.47
MAP1LC3B-208ENST00000570189 RSPO4Q2I0M5 234 aaPredicted RBP17.97■□□□□ 0.47
MAP1LC3B-208ENST00000570189 BTBD8Q5XKL5 378 aa17.97■□□□□ 0.47
MAP1LC3B-208ENST00000570189 PIGZQ86VD9 579 aa17.97■□□□□ 0.47
MAP1LC3B-208ENST00000570189 TTC30AQ86WT1 665 aa17.97■□□□□ 0.47
MAP1LC3B-208ENST00000570189 SCML4Q8N228 414 aa17.97■□□□□ 0.47
MAP1LC3B-208ENST00000570189 TRIML1Q8N9V2 468 aa17.97■□□□□ 0.47
MAP1LC3B-208ENST00000570189 IL17RCQ8NAC3 791 aa17.97■□□□□ 0.47
MAP1LC3B-208ENST00000570189 ARHGEF4Q9NR80 690 aa17.97■□□□□ 0.47
MAP1LC3B-208ENST00000570189 WDR35Q9P2L0 1181 aa17.97■□□□□ 0.47
MAP1LC3B-208ENST00000570189 NAGPAQ9UK23 515 aa17.97■□□□□ 0.47
MAP1LC3B-208ENST00000570189 USP18Q9UMW8 372 aa17.97■□□□□ 0.47
MAP1LC3B-208ENST00000570189 ZNF510Q9Y2H8 683 aa17.97■□□□□ 0.47
MAP1LC3B-208ENST00000570189 STARD13Q9Y3M8 1113 aa17.97■□□□□ 0.47
MAP1LC3B-208ENST00000570189 TNRC6BQ9UPQ9 1833 aaKnown RBP17.96■□□□□ 0.47
MAP1LC3B-208ENST00000570189 SCAMP3O14828 347 aaKnown RBP17.96■□□□□ 0.47
MAP1LC3B-208ENST00000570189 XPO1O14980 1071 aaKnown RBP17.96■□□□□ 0.47
MAP1LC3B-208ENST00000570189 GNA14O95837 355 aa17.96■□□□□ 0.47
MAP1LC3B-208ENST00000570189 PAEPP09466 180 aa17.96■□□□□ 0.47
MAP1LC3B-208ENST00000570189 CCDC192P0DO97 292 aa17.96■□□□□ 0.47
MAP1LC3B-208ENST00000570189 VDRP11473 427 aa17.96■□□□□ 0.47
MAP1LC3B-208ENST00000570189 COG7P83436 770 aa17.96■□□□□ 0.47
MAP1LC3B-208ENST00000570189 PLK5Q496M5 336 aa17.96■□□□□ 0.47
MAP1LC3B-208ENST00000570189 PKDCCQ504Y2 493 aa17.96■□□□□ 0.47
MAP1LC3B-208ENST00000570189 SGO2Q562F6 1265 aa17.96■□□□□ 0.47
MAP1LC3B-208ENST00000570189 C2orf27AQ580R0 203 aa17.96■□□□□ 0.47
MAP1LC3B-208ENST00000570189 C10orf120Q5SQS8 335 aa17.96■□□□□ 0.47
MAP1LC3B-208ENST00000570189 PRR23CQ6ZRP0 262 aa17.96■□□□□ 0.47
MAP1LC3B-208ENST00000570189 NUDT18Q6ZVK8 323 aa17.96■□□□□ 0.47
MAP1LC3B-208ENST00000570189 KBTBD6Q86V97 674 aa17.96■□□□□ 0.47
MAP1LC3B-208ENST00000570189 TMEM25Q86YD3 366 aa17.96■□□□□ 0.47
MAP1LC3B-208ENST00000570189 TERB1Q8NA31 727 aa17.96■□□□□ 0.47
MAP1LC3B-208ENST00000570189 TSTD1Q8NFU3 115 aa17.96■□□□□ 0.47
MAP1LC3B-208ENST00000570189 LMO3Q8TAP4 145 aa17.96■□□□□ 0.47
MAP1LC3B-208ENST00000570189 NETO1Q8TDF5 533 aa17.96■□□□□ 0.47
MAP1LC3B-208ENST00000570189 JAKMIP2Q96AA8 810 aa17.96■□□□□ 0.47
MAP1LC3B-208ENST00000570189 RTKNQ9BST9 563 aa17.96■□□□□ 0.47
MAP1LC3B-208ENST00000570189 POLR3BQ9NW08 1133 aaPredicted RBP17.96■□□□□ 0.47
MAP1LC3B-208ENST00000570189 DEC1Q9P2X7 70 aa17.96■□□□□ 0.47
MAP1LC3B-208ENST00000570189 THADAQ6YHU6 1953 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms