RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 KPNA1P52294 538 aaPredicted RBP24.56■■□□□ 1.52
RAB40C-212ENST00000569575 VAV2P52735 878 aa24.56■■□□□ 1.52
RAB40C-212ENST00000569575 MAMLD1Q13495 774 aa24.56■■□□□ 1.52
RAB40C-212ENST00000569575 ZNF662Q6ZS27 426 aa24.56■■□□□ 1.52
RAB40C-212ENST00000569575 SCD5Q86SK9 330 aa24.56■■□□□ 1.52
RAB40C-212ENST00000569575 HS6ST3Q8IZP7 471 aa24.56■■□□□ 1.52
RAB40C-212ENST00000569575 FAM149B1Q96BN6 582 aa24.56■■□□□ 1.52
RAB40C-212ENST00000569575 SLC2A13Q96QE2 648 aa24.56■■□□□ 1.52
RAB40C-212ENST00000569575 TASP1Q9H6P5 420 aa24.56■■□□□ 1.52
RAB40C-212ENST00000569575 HCFC1R1Q9NWW0 138 aa24.56■■□□□ 1.52
RAB40C-212ENST00000569575 MYO16Q9Y6X6 1858 aa24.55■■□□□ 1.52
RAB40C-212ENST00000569575 A0A1W2PQH9 124 aa24.55■■□□□ 1.52
RAB40C-212ENST00000569575 PJA2O43164 708 aa24.55■■□□□ 1.52
RAB40C-212ENST00000569575 DAB1O75553 588 aa24.55■■□□□ 1.52
RAB40C-212ENST00000569575 CCDC175P0C221 793 aa24.55■■□□□ 1.52
RAB40C-212ENST00000569575 KCNA5P22460 613 aa24.55■■□□□ 1.52
RAB40C-212ENST00000569575 ATP5C1P36542 298 aaKnown RBP24.55■■□□□ 1.52
RAB40C-212ENST00000569575 MATKP42679 507 aa24.55■■□□□ 1.52
RAB40C-212ENST00000569575 MTA1Q13330 715 aa24.55■■□□□ 1.52
RAB40C-212ENST00000569575 CBX2Q14781 532 aaPredicted RBP24.55■■□□□ 1.52
RAB40C-212ENST00000569575 ACAP1Q15027 740 aa24.55■■□□□ 1.52
RAB40C-212ENST00000569575 AAK1Q2M2I8 961 aa24.55■■□□□ 1.52
RAB40C-212ENST00000569575 PPP1R15BQ5SWA1 713 aa24.55■■□□□ 1.52
RAB40C-212ENST00000569575 MSANTD2Q6P1R3 559 aa24.55■■□□□ 1.52
RAB40C-212ENST00000569575 DCUN1D2Q6PH85 259 aa24.55■■□□□ 1.52
RAB40C-212ENST00000569575 KIAA1958Q8N8K9 716 aa24.55■■□□□ 1.52
RAB40C-212ENST00000569575 UBE2Q2Q8WVN8 375 aa24.55■■□□□ 1.52
RAB40C-212ENST00000569575 THAP2Q9H0W7 228 aa24.55■■□□□ 1.52
RAB40C-212ENST00000569575 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP24.55■■□□□ 1.52
RAB40C-212ENST00000569575 TJP2Q9UDY2 1190 aa24.55■■□□□ 1.52
RAB40C-212ENST00000569575 USTQ9Y2C2 406 aa24.55■■□□□ 1.52
RAB40C-212ENST00000569575 C2orf16Q68DN1 1984 aa24.54■■□□□ 1.52
RAB40C-212ENST00000569575 NOTCH4Q99466 2003 aa24.54■■□□□ 1.52
RAB40C-212ENST00000569575 BRWD1Q9NSI6 2320 aa24.54■■□□□ 1.52
RAB40C-212ENST00000569575 A0A1W2PRU2 124 aa24.54■■□□□ 1.52
RAB40C-212ENST00000569575 PIK3R2O00459 728 aa24.54■■□□□ 1.52
RAB40C-212ENST00000569575 TLR5O60602 858 aa24.54■■□□□ 1.52
RAB40C-212ENST00000569575 OLFM2O95897 454 aa24.54■■□□□ 1.52
RAB40C-212ENST00000569575 OAS1P00973 400 aaKnown RBP24.54■■□□□ 1.52
RAB40C-212ENST00000569575 RARGP13631 454 aa24.54■■□□□ 1.52
RAB40C-212ENST00000569575 ABCB4P21439 1286 aa24.54■■□□□ 1.52
RAB40C-212ENST00000569575 NNTQ13423 1086 aa24.54■■□□□ 1.52
RAB40C-212ENST00000569575 MTF1Q14872 753 aa24.54■■□□□ 1.52
RAB40C-212ENST00000569575 SHKBP1Q8TBC3 707 aa24.54■■□□□ 1.52
RAB40C-212ENST00000569575 FEZF2Q8TBJ5 459 aa24.54■■□□□ 1.52
RAB40C-212ENST00000569575 RFFLQ8WZ73 363 aa24.54■■□□□ 1.52
RAB40C-212ENST00000569575 KHSRPQ92945 711 aaKnown RBP eCLIP24.54■■□□□ 1.52
RAB40C-212ENST00000569575 TSGA10Q9BZW7 698 aa24.54■■□□□ 1.52
RAB40C-212ENST00000569575 DNMT3LQ9UJW3 386 aa24.54■■□□□ 1.52
RAB40C-212ENST00000569575 ADGRG1Q9Y653 693 aa24.54■■□□□ 1.52
RAB40C-212ENST00000569575 ANAPC1Q9H1A4 1944 aa24.53■■□□□ 1.52
RAB40C-212ENST00000569575 TRAV19A0A0A6YYK7 116 aa24.53■■□□□ 1.52
RAB40C-212ENST00000569575 GOLGA8SH3BPF8 625 aa24.53■■□□□ 1.52
RAB40C-212ENST00000569575 TADA3O75528 432 aa24.53■■□□□ 1.52
RAB40C-212ENST00000569575 MTA2O94776 668 aa24.53■■□□□ 1.52
RAB40C-212ENST00000569575 F9P00740 461 aa24.53■■□□□ 1.52
RAB40C-212ENST00000569575 NCAM1P13591 858 aa24.53■■□□□ 1.52
RAB40C-212ENST00000569575 GBP1P32455 592 aa24.53■■□□□ 1.52
RAB40C-212ENST00000569575 HADHBP55084 474 aaKnown RBP24.53■■□□□ 1.52
RAB40C-212ENST00000569575 KIF5AQ12840 1032 aa24.53■■□□□ 1.52
RAB40C-212ENST00000569575 RSRC2Q7L4I2 434 aaKnown RBP24.53■■□□□ 1.52
RAB40C-212ENST00000569575 KIAA1328Q86T90 577 aa24.53■■□□□ 1.52
RAB40C-212ENST00000569575 CLEC4CQ8WTT0 213 aa24.53■■□□□ 1.52
RAB40C-212ENST00000569575 NT5C3BQ969T7 300 aa24.53■■□□□ 1.52
RAB40C-212ENST00000569575 E2F7Q96AV8 911 aa24.53■■□□□ 1.52
RAB40C-212ENST00000569575 DDX23Q9BUQ8 820 aaKnown RBP24.53■■□□□ 1.52
RAB40C-212ENST00000569575 NMUR1Q9HB89 426 aa24.53■■□□□ 1.52
RAB40C-212ENST00000569575 USP15Q9Y4E8 981 aaPredicted RBP24.53■■□□□ 1.52
RAB40C-212ENST00000569575 PAXBP1Q9Y5B6 917 aa24.53■■□□□ 1.52
RAB40C-212ENST00000569575 OBSL1O75147 1896 aa24.52■■□□□ 1.52
RAB40C-212ENST00000569575 MBTPS2O43462 519 aa24.52■■□□□ 1.52
RAB40C-212ENST00000569575 MOSPD3O75425 235 aa24.52■■□□□ 1.52
RAB40C-212ENST00000569575 ABL1P00519 1130 aa24.52■■□□□ 1.52
RAB40C-212ENST00000569575 HDCP19113 662 aa24.52■■□□□ 1.52
RAB40C-212ENST00000569575 CCR2P41597 374 aa24.52■■□□□ 1.52
RAB40C-212ENST00000569575 ARHGAP25P42331 645 aa24.52■■□□□ 1.52
RAB40C-212ENST00000569575 PTPN9P43378 593 aa24.52■■□□□ 1.52
RAB40C-212ENST00000569575 SLC7A9P82251 487 aa24.52■■□□□ 1.52
RAB40C-212ENST00000569575 COG7P83436 770 aa24.52■■□□□ 1.52
RAB40C-212ENST00000569575 IFI16Q16666 785 aaKnown RBP24.52■■□□□ 1.52
RAB40C-212ENST00000569575 SLC25A52Q3SY17 297 aa24.52■■□□□ 1.52
RAB40C-212ENST00000569575 C2CD6Q53TS8 623 aa24.52■■□□□ 1.52
RAB40C-212ENST00000569575 OTOP3Q7RTS5 596 aa24.52■■□□□ 1.52
RAB40C-212ENST00000569575 DDX42Q86XP3 938 aaKnown RBP eCLIP24.52■■□□□ 1.52
RAB40C-212ENST00000569575 PPM1EQ8WY54 764 aa24.52■■□□□ 1.52
RAB40C-212ENST00000569575 PGAP3Q96FM1 320 aaPredicted RBP24.52■■□□□ 1.52
RAB40C-212ENST00000569575 METTL5Q9NRN9 209 aaKnown RBP24.52■■□□□ 1.52
RAB40C-212ENST00000569575 CDH7Q9ULB5 785 aa24.52■■□□□ 1.52
RAB40C-212ENST00000569575 CDH23Q9H251 3354 aa24.51■■□□□ 1.51
RAB40C-212ENST00000569575 TMEM191CA6NGB0 347 aa24.51■■□□□ 1.51
RAB40C-212ENST00000569575 C2CD4BA6NLJ0 364 aa24.51■■□□□ 1.51
RAB40C-212ENST00000569575 CCP110O43303 1012 aa24.51■■□□□ 1.51
RAB40C-212ENST00000569575 ZSCAN12O43309 604 aa24.51■■□□□ 1.51
RAB40C-212ENST00000569575 FYNP06241 537 aa24.51■■□□□ 1.51
RAB40C-212ENST00000569575 SDC4P31431 198 aa24.51■■□□□ 1.51
RAB40C-212ENST00000569575 SLC5A9Q2M3M2 681 aa24.51■■□□□ 1.51
RAB40C-212ENST00000569575 DCAF6Q58WW2 860 aa24.51■■□□□ 1.51
RAB40C-212ENST00000569575 GPR158Q5T848 1215 aa24.51■■□□□ 1.51
RAB40C-212ENST00000569575 CMTM8Q8IZV2 173 aa24.51■■□□□ 1.51
RAB40C-212ENST00000569575 DEFB106AQ8N104 65 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms