RNA–Protein interactions for RNA: ENST00000569476.2

LINC00559-201, long intergenic non-protein coding RNA 559, humanhuman

TSL 1 (best) BASIC

Gene LINC00559, Length 3,867 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00559-201ENST00000569476 PATJQ8NI35 1801 aa8.18□□□□□ -1.1
LINC00559-201ENST00000569476 TRAFD1O14545 582 aaPredicted RBP8.18□□□□□ -1.1
LINC00559-201ENST00000569476 INPPL1O15357 1258 aa8.18□□□□□ -1.1
LINC00559-201ENST00000569476 DNAJC6O75061 913 aa8.18□□□□□ -1.1
LINC00559-201ENST00000569476 DGKIO75912 1065 aa8.18□□□□□ -1.1
LINC00559-201ENST00000569476 KRT37O76014 449 aa8.18□□□□□ -1.1
LINC00559-201ENST00000569476 ZBED1O96006 694 aa8.18□□□□□ -1.1
LINC00559-201ENST00000569476 TROVE2P10155 538 aaKnown RBP eCLIP8.18□□□□□ -1.1
LINC00559-201ENST00000569476 CYP2C9P11712 490 aa8.18□□□□□ -1.1
LINC00559-201ENST00000569476 SKIP12755 728 aa8.18□□□□□ -1.1
LINC00559-201ENST00000569476 TCF4P15884 667 aa8.18□□□□□ -1.1
LINC00559-201ENST00000569476 RGS2P41220 211 aa8.18□□□□□ -1.1
LINC00559-201ENST00000569476 NEK3P51956 506 aa8.18□□□□□ -1.1
LINC00559-201ENST00000569476 ZNF200P98182 395 aaPredicted RBP8.18□□□□□ -1.1
LINC00559-201ENST00000569476 LCA5Q86VQ0 697 aa8.18□□□□□ -1.1
LINC00559-201ENST00000569476 PQLC3Q8N755 202 aa8.18□□□□□ -1.1
LINC00559-201ENST00000569476 PEBP4Q96S96 227 aa8.18□□□□□ -1.1
LINC00559-201ENST00000569476 TMEM121Q9BTD3 319 aa8.18□□□□□ -1.1
LINC00559-201ENST00000569476 AP5M1Q9H0R1 490 aa8.18□□□□□ -1.1
LINC00559-201ENST00000569476 NRDE2Q9H7Z3 1164 aa8.18□□□□□ -1.1
LINC00559-201ENST00000569476 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.18□□□□□ -1.1
LINC00559-201ENST00000569476 ADAM28Q9UKQ2 775 aa8.18□□□□□ -1.1
LINC00559-201ENST00000569476 C17orf102A2RUQ5 167 aa8.18□□□□□ -1.1
LINC00559-201ENST00000569476 VTNP04004 478 aa8.18□□□□□ -1.1
LINC00559-201ENST00000569476 MATKP42679 507 aa8.18□□□□□ -1.1
LINC00559-201ENST00000569476 SLCO1A2P46721 670 aa8.18□□□□□ -1.1
LINC00559-201ENST00000569476 PAFAH1B3Q15102 231 aaKnown RBP8.18□□□□□ -1.1
LINC00559-201ENST00000569476 SNCBQ16143 134 aa8.18□□□□□ -1.1
LINC00559-201ENST00000569476 SLC25A52Q3SY17 297 aa8.18□□□□□ -1.1
LINC00559-201ENST00000569476 ACBD5Q5T8D3 534 aaPredicted RBP8.18□□□□□ -1.1
LINC00559-201ENST00000569476 TTC30AQ86WT1 665 aa8.18□□□□□ -1.1
LINC00559-201ENST00000569476 KLHDC8BQ8IXV7 354 aa8.18□□□□□ -1.1
LINC00559-201ENST00000569476 CCDC63Q8NA47 563 aa8.18□□□□□ -1.1
LINC00559-201ENST00000569476 FBXO36Q8NEA4 188 aa8.18□□□□□ -1.1
LINC00559-201ENST00000569476 FAM172AQ8WUF8 416 aa8.18□□□□□ -1.1
LINC00559-201ENST00000569476 C9orf72Q96LT7 481 aa8.18□□□□□ -1.1
LINC00559-201ENST00000569476 OLFM3Q96PB7 478 aa8.18□□□□□ -1.1
LINC00559-201ENST00000569476 PAFAH2Q99487 392 aa8.18□□□□□ -1.1
LINC00559-201ENST00000569476 ELAC2Q9BQ52 826 aaKnown RBP8.18□□□□□ -1.1
LINC00559-201ENST00000569476 DUSP16Q9BY84 665 aa8.18□□□□□ -1.1
LINC00559-201ENST00000569476 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.18□□□□□ -1.1
LINC00559-201ENST00000569476 IKBKGQ9Y6K9 419 aa8.18□□□□□ -1.1
LINC00559-201ENST00000569476 MCM3APO60318 1980 aa8.18□□□□□ -1.1
LINC00559-201ENST00000569476 KPNA7A9QM74 516 aa8.18□□□□□ -1.1
LINC00559-201ENST00000569476 E7ENQ6 273 aa8.18□□□□□ -1.1
LINC00559-201ENST00000569476 C2CD2LO14523 706 aa8.18□□□□□ -1.1
LINC00559-201ENST00000569476 KRT38O76015 456 aa8.18□□□□□ -1.1
LINC00559-201ENST00000569476 F9P00740 461 aa8.18□□□□□ -1.1
LINC00559-201ENST00000569476 ZNF865P0CJ78 1059 aaPredicted RBP8.18□□□□□ -1.1
LINC00559-201ENST00000569476 HNRNPH1P31943 449 aaKnown RBP8.18□□□□□ -1.1
LINC00559-201ENST00000569476 L1CAMP32004 1257 aa8.18□□□□□ -1.1
LINC00559-201ENST00000569476 NOS2P35228 1153 aa8.18□□□□□ -1.1
LINC00559-201ENST00000569476 GNL1P36915 607 aaPredicted RBP8.18□□□□□ -1.1
LINC00559-201ENST00000569476 IGBP1P78318 339 aa8.18□□□□□ -1.1
LINC00559-201ENST00000569476 ZNF394Q53GI3 561 aa8.18□□□□□ -1.1
LINC00559-201ENST00000569476 TMEM63BQ5T3F8 832 aa8.18□□□□□ -1.1
LINC00559-201ENST00000569476 TXNRD3NBQ6F5E7 133 aa8.18□□□□□ -1.1
LINC00559-201ENST00000569476 MRPL10Q7Z7H8 261 aaKnown RBP8.18□□□□□ -1.1
LINC00559-201ENST00000569476 CCDC117Q8IWD4 279 aaPredicted RBP8.18□□□□□ -1.1
LINC00559-201ENST00000569476 VPS52Q8N1B4 723 aa8.18□□□□□ -1.1
LINC00559-201ENST00000569476 KHSRPQ92945 711 aaKnown RBP eCLIP8.18□□□□□ -1.1
LINC00559-201ENST00000569476 VAT1Q99536 393 aa8.18□□□□□ -1.1
LINC00559-201ENST00000569476 APBA2Q99767 749 aa8.18□□□□□ -1.1
LINC00559-201ENST00000569476 SNRNP25Q9BV90 132 aaKnown RBP8.18□□□□□ -1.1
LINC00559-201ENST00000569476 ETNK2Q9NVF9 386 aa8.18□□□□□ -1.1
LINC00559-201ENST00000569476 DSEQ9UL01 958 aa8.18□□□□□ -1.1
LINC00559-201ENST00000569476 FZD10Q9ULW2 581 aa8.18□□□□□ -1.1
LINC00559-201ENST00000569476 GIT1Q9Y2X7 761 aa8.18□□□□□ -1.1
LINC00559-201ENST00000569476 PCDHA11Q9Y5I1 949 aa8.18□□□□□ -1.1
LINC00559-201ENST00000569476 USP3Q9Y6I4 520 aa8.18□□□□□ -1.1
LINC00559-201ENST00000569476 H7C0C1 242 aa8.17□□□□□ -1.1
LINC00559-201ENST00000569476 GABRDO14764 452 aa8.17□□□□□ -1.1
LINC00559-201ENST00000569476 PAPSS1O43252 624 aaPredicted RBP8.17□□□□□ -1.1
LINC00559-201ENST00000569476 HUS1O60921 280 aa8.17□□□□□ -1.1
LINC00559-201ENST00000569476 ALDH1A2O94788 518 aa8.17□□□□□ -1.1
LINC00559-201ENST00000569476 ARL4AP40617 200 aa8.17□□□□□ -1.1
LINC00559-201ENST00000569476 ATP5OP48047 213 aa8.17□□□□□ -1.1
LINC00559-201ENST00000569476 POLD2P49005 469 aa8.17□□□□□ -1.1
LINC00559-201ENST00000569476 CDH8P55286 799 aa8.17□□□□□ -1.1
LINC00559-201ENST00000569476 MTA1Q13330 715 aa8.17□□□□□ -1.1
LINC00559-201ENST00000569476 SNX17Q15036 470 aa8.17□□□□□ -1.1
LINC00559-201ENST00000569476 PDK1Q15118 436 aa8.17□□□□□ -1.1
LINC00559-201ENST00000569476 PRKD1Q15139 912 aaPredicted RBP8.17□□□□□ -1.1
LINC00559-201ENST00000569476 UBXN11Q5T124 520 aa8.17□□□□□ -1.1
LINC00559-201ENST00000569476 PPP1R26Q5T8A7 1209 aaPredicted RBP8.17□□□□□ -1.1
LINC00559-201ENST00000569476 PHLDB2Q86SQ0 1253 aa8.17□□□□□ -1.1
LINC00559-201ENST00000569476 UNC45BQ8IWX7 931 aa8.17□□□□□ -1.1
LINC00559-201ENST00000569476 PARP9Q8IXQ6 854 aa8.17□□□□□ -1.1
LINC00559-201ENST00000569476 SRRM1Q8IYB3 904 aaKnown RBP8.17□□□□□ -1.1
LINC00559-201ENST00000569476 MRPL45Q9BRJ2 306 aaKnown RBP8.17□□□□□ -1.1
LINC00559-201ENST00000569476 PITPNM3Q9BZ71 974 aa8.17□□□□□ -1.1
LINC00559-201ENST00000569476 IGSF9Q9P2J2 1179 aa8.17□□□□□ -1.1
LINC00559-201ENST00000569476 HMGXB4Q9UGU5 601 aa8.17□□□□□ -1.1
LINC00559-201ENST00000569476 LNPEPQ9UIQ6 1025 aa8.17□□□□□ -1.1
LINC00559-201ENST00000569476 TSC2P49815 1807 aa8.17□□□□□ -1.1
LINC00559-201ENST00000569476 SNRPAP09012 282 aaKnown RBP8.17□□□□□ -1.1
LINC00559-201ENST00000569476 ZNF286BP0CG31 522 aa8.17□□□□□ -1.1
LINC00559-201ENST00000569476 IL4RP24394 825 aa8.17□□□□□ -1.1
LINC00559-201ENST00000569476 HADHAP40939 763 aa8.17□□□□□ -1.1
LINC00559-201ENST00000569476 OSTNP61366 133 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms