RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 UQCRFS1P47985 274 aa7.1□□□□□ -1.27
HERPUD1-217ENST00000569429 OSTNP61366 133 aa7.1□□□□□ -1.27
HERPUD1-217ENST00000569429 SRSF6Q13247 344 aaKnown RBP7.1□□□□□ -1.27
HERPUD1-217ENST00000569429 KCNAB2Q13303 367 aa7.1□□□□□ -1.27
HERPUD1-217ENST00000569429 GRAMD4Q6IC98 578 aa7.1□□□□□ -1.27
HERPUD1-217ENST00000569429 RSRC2Q7L4I2 434 aaKnown RBP7.1□□□□□ -1.27
HERPUD1-217ENST00000569429 TPH2Q8IWU9 490 aa7.1□□□□□ -1.27
HERPUD1-217ENST00000569429 MMP21Q8N119 569 aa7.1□□□□□ -1.27
HERPUD1-217ENST00000569429 OXR1Q8N573 874 aa7.1□□□□□ -1.27
HERPUD1-217ENST00000569429 ZSCAN1Q8NBB4 408 aa7.1□□□□□ -1.27
HERPUD1-217ENST00000569429 TBCKQ8TEA7 893 aa7.1□□□□□ -1.27
HERPUD1-217ENST00000569429 HTR3CQ8WXA8 447 aa7.1□□□□□ -1.27
HERPUD1-217ENST00000569429 DYDC2Q96IM9 177 aa7.1□□□□□ -1.27
HERPUD1-217ENST00000569429 SENP8Q96LD8 212 aa7.1□□□□□ -1.27
HERPUD1-217ENST00000569429 DUSP9Q99956 384 aaKnown RBP7.1□□□□□ -1.27
HERPUD1-217ENST00000569429 ERVMER34-1Q9H9K5 563 aa7.1□□□□□ -1.27
HERPUD1-217ENST00000569429 PTPRHQ9HD43 1115 aa7.1□□□□□ -1.27
HERPUD1-217ENST00000569429 GDF3Q9NR23 364 aa7.1□□□□□ -1.27
HERPUD1-217ENST00000569429 PCDHB5Q9Y5E4 795 aa7.1□□□□□ -1.27
HERPUD1-217ENST00000569429 STON1Q9Y6Q2 735 aa7.1□□□□□ -1.27
HERPUD1-217ENST00000569429 JMJD1CQ15652 2540 aa7.1□□□□□ -1.27
HERPUD1-217ENST00000569429 ATRQ13535 2644 aa7.1□□□□□ -1.27
HERPUD1-217ENST00000569429 NPC1O15118 1278 aa7.09□□□□□ -1.27
HERPUD1-217ENST00000569429 PRPF40AO75400 957 aaKnown RBP7.09□□□□□ -1.27
HERPUD1-217ENST00000569429 WNT1P04628 370 aa7.09□□□□□ -1.27
HERPUD1-217ENST00000569429 PRKCGP05129 697 aa7.09□□□□□ -1.27
HERPUD1-217ENST00000569429 ITGA2BP08514 1039 aa7.09□□□□□ -1.27
HERPUD1-217ENST00000569429 LIG1P18858 919 aa7.09□□□□□ -1.27
HERPUD1-217ENST00000569429 CYP3A5P20815 502 aa7.09□□□□□ -1.27
HERPUD1-217ENST00000569429 NAMPTP43490 491 aa7.09□□□□□ -1.27
HERPUD1-217ENST00000569429 EFNA5P52803 228 aa7.09□□□□□ -1.27
HERPUD1-217ENST00000569429 COPAP53621 1224 aa7.09□□□□□ -1.27
HERPUD1-217ENST00000569429 BCAT1P54687 386 aa7.09□□□□□ -1.27
HERPUD1-217ENST00000569429 LILRA4P59901 499 aa7.09□□□□□ -1.27
HERPUD1-217ENST00000569429 DAB2P98082 770 aa7.09□□□□□ -1.27
HERPUD1-217ENST00000569429 ZNF211Q13398 564 aaPredicted RBP7.09□□□□□ -1.27
HERPUD1-217ENST00000569429 ENPP2Q13822 863 aa7.09□□□□□ -1.27
HERPUD1-217ENST00000569429 SAFBQ15424 915 aaKnown RBP eCLIP7.09□□□□□ -1.27
HERPUD1-217ENST00000569429 ZBTB6Q15916 424 aa7.09□□□□□ -1.27
HERPUD1-217ENST00000569429 RTN1Q16799 776 aa7.09□□□□□ -1.27
HERPUD1-217ENST00000569429 SLC10A6Q3KNW5 377 aa7.09□□□□□ -1.27
HERPUD1-217ENST00000569429 SDHAF4Q5VUM1 108 aa7.09□□□□□ -1.27
HERPUD1-217ENST00000569429 SYNE3Q6ZMZ3 975 aa7.09□□□□□ -1.27
HERPUD1-217ENST00000569429 DDX42Q86XP3 938 aaKnown RBP eCLIP7.09□□□□□ -1.27
HERPUD1-217ENST00000569429 MCPH1Q8NEM0 835 aa7.09□□□□□ -1.27
HERPUD1-217ENST00000569429 DEPTORQ8TB45 409 aa7.09□□□□□ -1.27
HERPUD1-217ENST00000569429 SCFD1Q8WVM8 642 aa7.09□□□□□ -1.27
HERPUD1-217ENST00000569429 BSNDQ8WZ55 320 aa7.09□□□□□ -1.27
HERPUD1-217ENST00000569429 DRC1Q96MC2 740 aa7.09□□□□□ -1.27
HERPUD1-217ENST00000569429 C22orf23Q9BZE7 217 aa7.09□□□□□ -1.27
HERPUD1-217ENST00000569429 KCNMB3Q9NPA1 279 aa7.09□□□□□ -1.27
HERPUD1-217ENST00000569429 ZBTB47Q9UFB7 747 aaPredicted RBP7.09□□□□□ -1.27
HERPUD1-217ENST00000569429 DDX25Q9UHL0 483 aaKnown RBP7.09□□□□□ -1.27
HERPUD1-217ENST00000569429 PCDHGA7Q9Y5G6 932 aa7.09□□□□□ -1.27
HERPUD1-217ENST00000569429 ENTPD2Q9Y5L3 495 aa7.09□□□□□ -1.27
HERPUD1-217ENST00000569429 CPQQ9Y646 472 aa7.09□□□□□ -1.27
HERPUD1-217ENST00000569429 STAB1Q9NY15 2570 aa7.09□□□□□ -1.28
HERPUD1-217ENST00000569429 COL6A5A8TX70 2615 aa7.08□□□□□ -1.28
HERPUD1-217ENST00000569429 A0A1W2PPC4 97 aa7.08□□□□□ -1.28
HERPUD1-217ENST00000569429 A0A1W2PR77 199 aa7.08□□□□□ -1.28
HERPUD1-217ENST00000569429 TRIM38O00635 465 aa7.08□□□□□ -1.28
HERPUD1-217ENST00000569429 SCAMP3O14828 347 aaKnown RBP7.08□□□□□ -1.28
HERPUD1-217ENST00000569429 SIGLEC6O43699 453 aa7.08□□□□□ -1.28
HERPUD1-217ENST00000569429 SYNCRIPO60506 623 aaKnown RBP7.08□□□□□ -1.28
HERPUD1-217ENST00000569429 USO1O60763 962 aaKnown RBP7.08□□□□□ -1.28
HERPUD1-217ENST00000569429 DIAPH2O60879 1101 aa7.08□□□□□ -1.28
HERPUD1-217ENST00000569429 VPS4BO75351 444 aa7.08□□□□□ -1.28
HERPUD1-217ENST00000569429 FSBPO95073 299 aa7.08□□□□□ -1.28
HERPUD1-217ENST00000569429 TNFSF15O95150 251 aa7.08□□□□□ -1.28
HERPUD1-217ENST00000569429 SEMA4FO95754 770 aa7.08□□□□□ -1.28
HERPUD1-217ENST00000569429 KRT7P08729 469 aa7.08□□□□□ -1.28
HERPUD1-217ENST00000569429 THEGLP0DJG4 465 aa7.08□□□□□ -1.28
HERPUD1-217ENST00000569429 MCF2P10911 925 aa7.08□□□□□ -1.28
HERPUD1-217ENST00000569429 XRCC6P12956 609 aaKnown RBP eCLIP7.08□□□□□ -1.28
HERPUD1-217ENST00000569429 GNLYP22749 145 aa7.08□□□□□ -1.28
HERPUD1-217ENST00000569429 POLE2P56282 527 aa7.08□□□□□ -1.28
HERPUD1-217ENST00000569429 NAA30Q147X3 362 aaPredicted RBP7.08□□□□□ -1.28
HERPUD1-217ENST00000569429 TGIF1Q15583 401 aa7.08□□□□□ -1.28
HERPUD1-217ENST00000569429 NFE2Q16621 373 aaPredicted RBP7.08□□□□□ -1.28
HERPUD1-217ENST00000569429 DDR2Q16832 855 aa7.08□□□□□ -1.28
HERPUD1-217ENST00000569429 ZNF568Q3ZCX4 644 aa7.08□□□□□ -1.28
HERPUD1-217ENST00000569429 DCAF6Q58WW2 860 aa7.08□□□□□ -1.28
HERPUD1-217ENST00000569429 ANKRD45Q5TZF3 282 aa7.08□□□□□ -1.28
HERPUD1-217ENST00000569429 BORAQ6PGQ7 559 aa7.08□□□□□ -1.28
HERPUD1-217ENST00000569429 APOA5Q6Q788 366 aa7.08□□□□□ -1.28
HERPUD1-217ENST00000569429 MAEAQ7L5Y9 396 aa7.08□□□□□ -1.28
HERPUD1-217ENST00000569429 C14orf80Q86SX3 495 aa7.08□□□□□ -1.28
HERPUD1-217ENST00000569429 FAM124AQ86V42 546 aa7.08□□□□□ -1.28
HERPUD1-217ENST00000569429 DCP1BQ8IZD4 617 aaKnown RBP7.08□□□□□ -1.28
HERPUD1-217ENST00000569429 THEM5Q8N1Q8 247 aa7.08□□□□□ -1.28
HERPUD1-217ENST00000569429 TMEM130Q8N3G9 435 aa7.08□□□□□ -1.28
HERPUD1-217ENST00000569429 GALNT11Q8NCW6 608 aa7.08□□□□□ -1.28
HERPUD1-217ENST00000569429 WDR36Q8NI36 951 aaKnown RBP7.08□□□□□ -1.28
HERPUD1-217ENST00000569429 LEO1Q8WVC0 666 aaPredicted RBP7.08□□□□□ -1.28
HERPUD1-217ENST00000569429 ATXN7L3BQ96GX2 97 aa7.08□□□□□ -1.28
HERPUD1-217ENST00000569429 SLC6A18Q96N87 628 aa7.08□□□□□ -1.28
HERPUD1-217ENST00000569429 ACO2Q99798 780 aaKnown RBP7.08□□□□□ -1.28
HERPUD1-217ENST00000569429 HSD17B14Q9BPX1 270 aa7.08□□□□□ -1.28
HERPUD1-217ENST00000569429 BTBD1Q9H0C5 482 aa7.08□□□□□ -1.28
HERPUD1-217ENST00000569429 RNF38Q9H0F5 515 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms