RNA–Protein interactions for RNA: ENST00000568875.1

SNAPC5-208, Transcript of small nuclear RNA activating complex polypeptide 5, humanhuman

TSL 2

Gene SNAPC5, Length 1,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC5-208ENST00000568875 VAMP7P51809 220 aa12.2□□□□□ -0.46
SNAPC5-208ENST00000568875 EPHA5P54756 1037 aa12.2□□□□□ -0.46
SNAPC5-208ENST00000568875 DRG2P55039 364 aaKnown RBP12.2□□□□□ -0.46
SNAPC5-208ENST00000568875 SMARCB1Q12824 385 aa12.2□□□□□ -0.46
SNAPC5-208ENST00000568875 MYO1EQ12965 1108 aa12.2□□□□□ -0.46
SNAPC5-208ENST00000568875 BIRC3Q13489 604 aa12.2□□□□□ -0.46
SNAPC5-208ENST00000568875 HTR4Q13639 388 aa12.2□□□□□ -0.46
SNAPC5-208ENST00000568875 SLC39A12Q504Y0 691 aa12.2□□□□□ -0.46
SNAPC5-208ENST00000568875 PHLDB3Q6NSJ2 640 aa12.2□□□□□ -0.46
SNAPC5-208ENST00000568875 C11orf63Q6NUN7 778 aa12.2□□□□□ -0.46
SNAPC5-208ENST00000568875 PARM1Q6UWI2 310 aa12.2□□□□□ -0.46
SNAPC5-208ENST00000568875 HS6ST3Q8IZP7 471 aa12.2□□□□□ -0.46
SNAPC5-208ENST00000568875 ELMOD1Q8N336 334 aa12.2□□□□□ -0.46
SNAPC5-208ENST00000568875 TTC9BQ8N6N2 239 aa12.2□□□□□ -0.46
SNAPC5-208ENST00000568875 TOP6BLQ8N6T0 577 aa12.2□□□□□ -0.46
SNAPC5-208ENST00000568875 SPATA18Q8TC71 538 aa12.2□□□□□ -0.46
SNAPC5-208ENST00000568875 FGF14Q92915 247 aa12.2□□□□□ -0.46
SNAPC5-208ENST00000568875 TCEAL4Q96EI5 215 aa12.2□□□□□ -0.46
SNAPC5-208ENST00000568875 ACBD6Q9BR61 282 aa12.2□□□□□ -0.46
SNAPC5-208ENST00000568875 RPP25Q9BUL9 199 aaKnown RBP12.2□□□□□ -0.46
SNAPC5-208ENST00000568875 LRRC3Q9BY71 257 aa12.2□□□□□ -0.46
SNAPC5-208ENST00000568875 RAB17Q9H0T7 212 aa12.2□□□□□ -0.46
SNAPC5-208ENST00000568875 RASSF4Q9H2L5 321 aa12.2□□□□□ -0.46
SNAPC5-208ENST00000568875 GDE1Q9NZC3 331 aa12.2□□□□□ -0.46
SNAPC5-208ENST00000568875 RSPH14Q9UHP6 348 aa12.2□□□□□ -0.46
SNAPC5-208ENST00000568875 DUSP12Q9UNI6 340 aa12.2□□□□□ -0.46
SNAPC5-208ENST00000568875 ATXN2Q99700 1313 aaKnown RBP12.19□□□□□ -0.46
SNAPC5-208ENST00000568875 ESYT3A0FGR9 886 aa12.19□□□□□ -0.46
SNAPC5-208ENST00000568875 GOLGA6L10A6NI86 522 aa12.19□□□□□ -0.46
SNAPC5-208ENST00000568875 EBAG9O00559 213 aa12.19□□□□□ -0.46
SNAPC5-208ENST00000568875 ZNF197O14709 1029 aa12.19□□□□□ -0.46
SNAPC5-208ENST00000568875 DDX3YO15523 660 aaKnown RBP12.19□□□□□ -0.46
SNAPC5-208ENST00000568875 MOSPD3O75425 235 aa12.19□□□□□ -0.46
SNAPC5-208ENST00000568875 MAGEA9P43362 315 aa12.19□□□□□ -0.46
SNAPC5-208ENST00000568875 ALDH1A3P47895 512 aa12.19□□□□□ -0.46
SNAPC5-208ENST00000568875 LHX1P48742 406 aa12.19□□□□□ -0.46
SNAPC5-208ENST00000568875 TUFMP49411 452 aaKnown RBP12.19□□□□□ -0.46
SNAPC5-208ENST00000568875 GNGT1P63211 74 aa12.19□□□□□ -0.46
SNAPC5-208ENST00000568875 CYP4A22Q5TCH4 519 aa12.19□□□□□ -0.46
SNAPC5-208ENST00000568875 OSTM1Q86WC4 334 aa12.19□□□□□ -0.46
SNAPC5-208ENST00000568875 DCP1BQ8IZD4 617 aaKnown RBP12.19□□□□□ -0.46
SNAPC5-208ENST00000568875 ST13P5Q8NFI4 369 aaPredicted RBP12.19□□□□□ -0.46
SNAPC5-208ENST00000568875 C2orf15Q8WU43 125 aaKnown RBP12.19□□□□□ -0.46
SNAPC5-208ENST00000568875 TMBIM4Q9HC24 238 aa12.19□□□□□ -0.46
SNAPC5-208ENST00000568875 TMLHEQ9NVH6 421 aa12.19□□□□□ -0.46
SNAPC5-208ENST00000568875 DDX43Q9NXZ2 648 aaKnown RBP12.19□□□□□ -0.46
SNAPC5-208ENST00000568875 UTP11Q9Y3A2 253 aaKnown RBP12.19□□□□□ -0.46
SNAPC5-208ENST00000568875 NUMBLQ9Y6R0 609 aa12.19□□□□□ -0.46
SNAPC5-208ENST00000568875 GOLGA6L10A0A0M3HER8 536 aa12.18□□□□□ -0.46
SNAPC5-208ENST00000568875 FOXN3O00409 490 aaPredicted RBP12.18□□□□□ -0.46
SNAPC5-208ENST00000568875 NARSO43776 548 aaKnown RBP12.18□□□□□ -0.46
SNAPC5-208ENST00000568875 SOAT2O75908 522 aa12.18□□□□□ -0.46
SNAPC5-208ENST00000568875 PDGFBP01127 241 aaPredicted RBP12.18□□□□□ -0.46
SNAPC5-208ENST00000568875 KRT14P02533 472 aa12.18□□□□□ -0.46
SNAPC5-208ENST00000568875 C4BPAP04003 597 aaKnown RBP12.18□□□□□ -0.46
SNAPC5-208ENST00000568875 CDR1P51861 262 aa12.18□□□□□ -0.46
SNAPC5-208ENST00000568875 EPHB3P54753 998 aa12.18□□□□□ -0.46
SNAPC5-208ENST00000568875 RNASE9P60153 205 aaKnown RBP12.18□□□□□ -0.46
SNAPC5-208ENST00000568875 PLD1Q13393 1074 aa12.18□□□□□ -0.46
SNAPC5-208ENST00000568875 DHX34Q14147 1143 aaKnown RBP12.18□□□□□ -0.46
SNAPC5-208ENST00000568875 HLTFQ14527 1009 aaKnown RBP eCLIP12.18□□□□□ -0.46
SNAPC5-208ENST00000568875 PDZD4Q76G19 769 aaPredicted RBP12.18□□□□□ -0.46
SNAPC5-208ENST00000568875 B4GALNT4Q76KP1 1039 aa12.18□□□□□ -0.46
SNAPC5-208ENST00000568875 DNAJB7Q7Z6W7 309 aaPredicted RBP12.18□□□□□ -0.46
SNAPC5-208ENST00000568875 FBXL6Q8N531 539 aa12.18□□□□□ -0.46
SNAPC5-208ENST00000568875 LEMD2Q8NC56 503 aa12.18□□□□□ -0.46
SNAPC5-208ENST00000568875 C3orf20Q8ND61 904 aa12.18□□□□□ -0.46
SNAPC5-208ENST00000568875 SPPL2BQ8TCT7 592 aa12.18□□□□□ -0.46
SNAPC5-208ENST00000568875 BCAS4Q8TDM0 211 aa12.18□□□□□ -0.46
SNAPC5-208ENST00000568875 KBTBD7Q8WVZ9 684 aa12.18□□□□□ -0.46
SNAPC5-208ENST00000568875 ING5Q8WYH8 240 aa12.18□□□□□ -0.46
SNAPC5-208ENST00000568875 MCRS1Q96EZ8 462 aa12.18□□□□□ -0.46
SNAPC5-208ENST00000568875 PKMYT1Q99640 499 aa12.18□□□□□ -0.46
SNAPC5-208ENST00000568875 XYLT2Q9H1B5 865 aa12.18□□□□□ -0.46
SNAPC5-208ENST00000568875 GGA2Q9UJY4 613 aa12.18□□□□□ -0.46
SNAPC5-208ENST00000568875 ASB3Q9Y575 518 aa12.18□□□□□ -0.46
SNAPC5-208ENST00000568875 RTN2O75298 545 aa12.17□□□□□ -0.46
SNAPC5-208ENST00000568875 STAU1O95793 577 aaKnown RBP12.17□□□□□ -0.46
SNAPC5-208ENST00000568875 FAM163BP0C2L3 166 aa12.17□□□□□ -0.46
SNAPC5-208ENST00000568875 MYZAPP0CAP1 466 aa12.17□□□□□ -0.46
SNAPC5-208ENST00000568875 TRIM49P0CI25 452 aa12.17□□□□□ -0.46
SNAPC5-208ENST00000568875 TRIM49CP0CI26 452 aa12.17□□□□□ -0.46
SNAPC5-208ENST00000568875 HAPLN1P10915 354 aaPredicted RBP12.17□□□□□ -0.46
SNAPC5-208ENST00000568875 CEBPBP17676 345 aa12.17□□□□□ -0.46
SNAPC5-208ENST00000568875 HSD17B3P37058 310 aa12.17□□□□□ -0.46
SNAPC5-208ENST00000568875 AP3M2P53677 418 aa12.17□□□□□ -0.46
SNAPC5-208ENST00000568875 EIF3BP55884 814 aaKnown RBP12.17□□□□□ -0.46
SNAPC5-208ENST00000568875 GPC5P78333 572 aa12.17□□□□□ -0.46
SNAPC5-208ENST00000568875 DLG4P78352 724 aa12.17□□□□□ -0.46
SNAPC5-208ENST00000568875 TSPY1Q01534 308 aa12.17□□□□□ -0.46
SNAPC5-208ENST00000568875 AGBL2Q5U5Z8 902 aa12.17□□□□□ -0.46
SNAPC5-208ENST00000568875 FOXR1Q6PIV2 292 aa12.17□□□□□ -0.46
SNAPC5-208ENST00000568875 TMC8Q8IU68 726 aa12.17□□□□□ -0.46
SNAPC5-208ENST00000568875 ADGRF2Q8IZF7 708 aa12.17□□□□□ -0.46
SNAPC5-208ENST00000568875 TMC2Q8TDI7 906 aa12.17□□□□□ -0.46
SNAPC5-208ENST00000568875 PSMG2Q969U7 264 aa12.17□□□□□ -0.46
SNAPC5-208ENST00000568875 RUNDC3BQ96NL0 473 aa12.17□□□□□ -0.46
SNAPC5-208ENST00000568875 ASAH2Q9NR71 780 aa12.17□□□□□ -0.46
SNAPC5-208ENST00000568875 GTF3C4Q9UKN8 822 aa12.17□□□□□ -0.46
SNAPC5-208ENST00000568875 PLAAQ9Y263 795 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms