RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 LCLAT1Q6UWP7 414 aa30.91■■■□□ 2.54
RAB40C-211ENST00000568586 TADA2BQ86TJ2 420 aa30.91■■■□□ 2.54
RAB40C-211ENST00000568586 IRF2BP1Q8IU81 584 aa30.91■■■□□ 2.54
RAB40C-211ENST00000568586 KAT5Q92993 513 aa30.91■■■□□ 2.54
RAB40C-211ENST00000568586 CNTN6Q9UQ52 1028 aa30.91■■■□□ 2.54
RAB40C-211ENST00000568586 K7EQS6 105 aa30.9■■■□□ 2.54
RAB40C-211ENST00000568586 RNF225M0QZC1 329 aaPredicted RBP30.9■■■□□ 2.54
RAB40C-211ENST00000568586 HOXC11O43248 304 aaPredicted RBP30.9■■■□□ 2.54
RAB40C-211ENST00000568586 ADH5P11766 374 aa30.9■■■□□ 2.54
RAB40C-211ENST00000568586 PLA2G4AP47712 749 aa30.9■■■□□ 2.54
RAB40C-211ENST00000568586 FNTBP49356 437 aa30.9■■■□□ 2.54
RAB40C-211ENST00000568586 ZNF132P52740 706 aa30.9■■■□□ 2.54
RAB40C-211ENST00000568586 ARHGAP18Q8N392 663 aa30.9■■■□□ 2.54
RAB40C-211ENST00000568586 TFAP2BQ92481 460 aa30.9■■■□□ 2.54
RAB40C-211ENST00000568586 HESX1Q9UBX0 185 aa30.9■■■□□ 2.54
RAB40C-211ENST00000568586 TULP2O00295 520 aa30.89■■■□□ 2.54
RAB40C-211ENST00000568586 RALAP11233 206 aa30.89■■■□□ 2.54
RAB40C-211ENST00000568586 CD19P15391 556 aa30.89■■■□□ 2.54
RAB40C-211ENST00000568586 GAD2Q05329 585 aa30.89■■■□□ 2.54
RAB40C-211ENST00000568586 CNGA2Q16280 664 aa30.89■■■□□ 2.54
RAB40C-211ENST00000568586 SYT13Q7L8C5 426 aa30.89■■■□□ 2.54
RAB40C-211ENST00000568586 WDR5BQ86VZ2 330 aa30.89■■■□□ 2.54
RAB40C-211ENST00000568586 ARHGEF19Q8IW93 802 aa30.89■■■□□ 2.54
RAB40C-211ENST00000568586 ETFBKMTQ8IXQ9 262 aa30.89■■■□□ 2.54
RAB40C-211ENST00000568586 CAMKK1Q8N5S9 505 aa30.89■■■□□ 2.54
RAB40C-211ENST00000568586 KCTD13Q8WZ19 329 aa30.89■■■□□ 2.54
RAB40C-211ENST00000568586 SPHK2Q9NRA0 654 aa30.89■■■□□ 2.54
RAB40C-211ENST00000568586 SMG5Q9UPR3 1016 aaKnown RBP30.89■■■□□ 2.54
RAB40C-211ENST00000568586 PCDHB4Q9Y5E5 795 aa30.89■■■□□ 2.54
RAB40C-211ENST00000568586 SETSIPP0DME0 302 aa30.88■■■□□ 2.53
RAB40C-211ENST00000568586 CHRM1P11229 460 aaPredicted RBP30.88■■■□□ 2.53
RAB40C-211ENST00000568586 TKTL1P51854 596 aa30.88■■■□□ 2.53
RAB40C-211ENST00000568586 GOLGA8FQ08AF8 430 aa30.88■■■□□ 2.53
RAB40C-211ENST00000568586 GOLGA8DPQ0D2H9 430 aa30.88■■■□□ 2.53
RAB40C-211ENST00000568586 C10orf120Q5SQS8 335 aa30.88■■■□□ 2.53
RAB40C-211ENST00000568586 RRAGAQ7L523 313 aa30.88■■■□□ 2.53
RAB40C-211ENST00000568586 BHLHA9Q7RTU4 235 aa30.88■■■□□ 2.53
RAB40C-211ENST00000568586 SCML4Q8N228 414 aa30.88■■■□□ 2.53
RAB40C-211ENST00000568586 RPLP0P6Q8NHW5 317 aa30.88■■■□□ 2.53
RAB40C-211ENST00000568586 USP33Q8TEY7 942 aa30.88■■■□□ 2.53
RAB40C-211ENST00000568586 KREMEN1Q96MU8 473 aa30.88■■■□□ 2.53
RAB40C-211ENST00000568586 PNKPQ96T60 521 aa30.88■■■□□ 2.53
RAB40C-211ENST00000568586 ZSWIM1Q9BR11 485 aa30.88■■■□□ 2.53
RAB40C-211ENST00000568586 INTS2Q9H0H0 1204 aaKnown RBP30.88■■■□□ 2.53
RAB40C-211ENST00000568586 LMBRD1Q9NUN5 540 aa30.88■■■□□ 2.53
RAB40C-211ENST00000568586 ATG2BQ96BY7 2078 aa30.87■■■□□ 2.53
RAB40C-211ENST00000568586 MYOFQ9NZM1 2061 aa30.87■■■□□ 2.53
RAB40C-211ENST00000568586 HRO43593 1189 aa30.87■■■□□ 2.53
RAB40C-211ENST00000568586 ZBED1O96006 694 aa30.87■■■□□ 2.53
RAB40C-211ENST00000568586 HOXC13P31276 330 aa30.87■■■□□ 2.53
RAB40C-211ENST00000568586 SLC6A11P48066 632 aa30.87■■■□□ 2.53
RAB40C-211ENST00000568586 STILQ15468 1287 aa30.87■■■□□ 2.53
RAB40C-211ENST00000568586 Q6ZNB5 142 aa30.87■■■□□ 2.53
RAB40C-211ENST00000568586 C12orf40Q86WS4 652 aa30.87■■■□□ 2.53
RAB40C-211ENST00000568586 PHTF2Q8N3S3 785 aa30.87■■■□□ 2.53
RAB40C-211ENST00000568586 ACDQ96AP0 544 aa30.87■■■□□ 2.53
RAB40C-211ENST00000568586 CNOT6LQ96LI5 555 aaKnown RBP30.87■■■□□ 2.53
RAB40C-211ENST00000568586 NUDT5Q9UKK9 219 aa30.87■■■□□ 2.53
RAB40C-211ENST00000568586 SLC8A2Q9UPR5 921 aa30.87■■■□□ 2.53
RAB40C-211ENST00000568586 PALM2-AKAP2B1ALY0 433 aaPredicted RBP30.86■■■□□ 2.53
RAB40C-211ENST00000568586 IRF1P10914 325 aa30.86■■■□□ 2.53
RAB40C-211ENST00000568586 MESP2Q0VG99 397 aa30.86■■■□□ 2.53
RAB40C-211ENST00000568586 SMYD5Q6GMV2 418 aa30.86■■■□□ 2.53
RAB40C-211ENST00000568586 TMEM25Q86YD3 366 aa30.86■■■□□ 2.53
RAB40C-211ENST00000568586 SLC35F5Q8WV83 523 aa30.86■■■□□ 2.53
RAB40C-211ENST00000568586 MARK1Q9P0L2 795 aa30.86■■■□□ 2.53
RAB40C-211ENST00000568586 LSM7Q9UK45 103 aaKnown RBP30.86■■■□□ 2.53
RAB40C-211ENST00000568586 WDR3Q9UNX4 943 aaKnown RBP eCLIP30.86■■■□□ 2.53
RAB40C-211ENST00000568586 MDM4O15151 490 aa30.85■■■□□ 2.53
RAB40C-211ENST00000568586 STC2O76061 302 aa30.85■■■□□ 2.53
RAB40C-211ENST00000568586 GRIA2P42262 883 aa30.85■■■□□ 2.53
RAB40C-211ENST00000568586 YWHAGP61981 247 aaKnown RBP eCLIP30.85■■■□□ 2.53
RAB40C-211ENST00000568586 RBBP8NLQ8NC74 664 aaPredicted RBP30.85■■■□□ 2.53
RAB40C-211ENST00000568586 UBA3Q8TBC4 463 aa30.85■■■□□ 2.53
RAB40C-211ENST00000568586 ULBP1Q9BZM6 244 aa30.85■■■□□ 2.53
RAB40C-211ENST00000568586 DMXL1Q9Y485 3027 aa30.85■■■□□ 2.53
RAB40C-211ENST00000568586 KIAA1549LQ6ZVL6 1849 aa30.84■■■□□ 2.53
RAB40C-211ENST00000568586 GTPBP10A4D1E9 387 aaKnown RBP30.84■■■□□ 2.53
RAB40C-211ENST00000568586 KAT7O95251 611 aa30.84■■■□□ 2.53
RAB40C-211ENST00000568586 MRPS21P82921 87 aaKnown RBP30.84■■■□□ 2.53
RAB40C-211ENST00000568586 COG7P83436 770 aa30.84■■■□□ 2.53
RAB40C-211ENST00000568586 NUP62CLQ9H1M0 184 aa30.84■■■□□ 2.53
RAB40C-211ENST00000568586 LRRC4Q9HBW1 653 aa30.84■■■□□ 2.53
RAB40C-211ENST00000568586 GABBR2O75899 941 aa30.83■■■□□ 2.53
RAB40C-211ENST00000568586 ERCC5P28715 1186 aaPredicted RBP30.83■■■□□ 2.53
RAB40C-211ENST00000568586 TNFRSF4P43489 277 aa30.83■■■□□ 2.53
RAB40C-211ENST00000568586 HEATR6Q6AI08 1181 aaKnown RBP30.83■■■□□ 2.53
RAB40C-211ENST00000568586 ENOSF1Q7L5Y1 443 aa30.83■■■□□ 2.53
RAB40C-211ENST00000568586 THAP9Q9H5L6 903 aa30.83■■■□□ 2.53
RAB40C-211ENST00000568586 CNGB3Q9NQW8 809 aa30.83■■■□□ 2.53
RAB40C-211ENST00000568586 ARHGEF4Q9NR80 690 aa30.83■■■□□ 2.53
RAB40C-211ENST00000568586 POLR3BQ9NW08 1133 aaPredicted RBP30.83■■■□□ 2.53
RAB40C-211ENST00000568586 EBF1Q9UH73 591 aa30.83■■■□□ 2.53
RAB40C-211ENST00000568586 ZNF510Q9Y2H8 683 aa30.83■■■□□ 2.53
RAB40C-211ENST00000568586 KLKB1P03952 638 aa30.82■■■□□ 2.52
RAB40C-211ENST00000568586 APODP05090 189 aa30.82■■■□□ 2.52
RAB40C-211ENST00000568586 ADIGQ0VDE8 80 aa30.82■■■□□ 2.52
RAB40C-211ENST00000568586 DMC1Q14565 340 aa30.82■■■□□ 2.52
RAB40C-211ENST00000568586 DPCR1Q3MIW9 517 aa30.82■■■□□ 2.52
RAB40C-211ENST00000568586 HSF5Q4G112 596 aaPredicted RBP30.82■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms