RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 CFIP05156 583 aa16.42■□□□□ 0.22
NME3-211ENST00000568561 HOXB2P14652 356 aa16.42■□□□□ 0.22
NME3-211ENST00000568561 ENGP17813 658 aa16.42■□□□□ 0.22
NME3-211ENST00000568561 GABRG2P18507 467 aa16.42■□□□□ 0.22
NME3-211ENST00000568561 CSRP1P21291 193 aaKnown RBP16.42■□□□□ 0.22
NME3-211ENST00000568561 ADORA2BP29275 332 aa16.42■□□□□ 0.22
NME3-211ENST00000568561 TUBP50607 506 aa16.42■□□□□ 0.22
NME3-211ENST00000568561 NDST1P52848 882 aa16.42■□□□□ 0.22
NME3-211ENST00000568561 STK4Q13043 487 aa16.42■□□□□ 0.22
NME3-211ENST00000568561 SNX30Q5VWJ9 437 aa16.42■□□□□ 0.22
NME3-211ENST00000568561 RESP18Q5W5W9 173 aa16.42■□□□□ 0.22
NME3-211ENST00000568561 EGFLAMQ63HQ2 1017 aa16.42■□□□□ 0.22
NME3-211ENST00000568561 UNQ6494/PRO21346Q6UXR6 183 aa16.42■□□□□ 0.22
NME3-211ENST00000568561 SYT12Q8IV01 421 aa16.42■□□□□ 0.22
NME3-211ENST00000568561 C12orf29Q8N999 325 aa16.42■□□□□ 0.22
NME3-211ENST00000568561 ACOX2Q99424 681 aa16.42■□□□□ 0.22
NME3-211ENST00000568561 DNAJC17Q9NVM6 304 aaKnown RBP16.42■□□□□ 0.22
NME3-211ENST00000568561 FAM13BQ9NYF5 915 aa16.42■□□□□ 0.22
NME3-211ENST00000568561 CGNQ9P2M7 1197 aaKnown RBP16.42■□□□□ 0.22
NME3-211ENST00000568561 SERTAD1Q9UHV2 236 aa16.42■□□□□ 0.22
NME3-211ENST00000568561 EVLQ9UI08 416 aaPredicted RBP16.42■□□□□ 0.22
NME3-211ENST00000568561 WASF3Q9UPY6 502 aa16.42■□□□□ 0.22
NME3-211ENST00000568561 WDFY3Q8IZQ1 3526 aa16.42■□□□□ 0.22
NME3-211ENST00000568561 FAM92AA1XBS5 289 aa16.41■□□□□ 0.22
NME3-211ENST00000568561 NEDD8-MDP1E9PL57 170 aa16.41■□□□□ 0.22
NME3-211ENST00000568561 MDM4O15151 490 aa16.41■□□□□ 0.22
NME3-211ENST00000568561 CYP26A1O43174 497 aa16.41■□□□□ 0.22
NME3-211ENST00000568561 GREM1O60565 184 aa16.41■□□□□ 0.22
NME3-211ENST00000568561 CEACAM1P13688 526 aa16.41■□□□□ 0.22
NME3-211ENST00000568561 CLDN10P78369 228 aa16.41■□□□□ 0.22
NME3-211ENST00000568561 RPL6Q02878 288 aaKnown RBP16.41■□□□□ 0.22
NME3-211ENST00000568561 GRAMD4Q6IC98 578 aa16.41■□□□□ 0.22
NME3-211ENST00000568561 TPGS1Q6ZTW0 290 aa16.41■□□□□ 0.22
NME3-211ENST00000568561 BHMTQ93088 406 aa16.41■□□□□ 0.22
NME3-211ENST00000568561 TWNKQ96RR1 684 aa16.41■□□□□ 0.22
NME3-211ENST00000568561 NUSAP1Q9BXS6 441 aaKnown RBP16.41■□□□□ 0.22
NME3-211ENST00000568561 OSER1Q9NX31 292 aa16.41■□□□□ 0.22
NME3-211ENST00000568561 NUDT5Q9UKK9 219 aa16.41■□□□□ 0.22
NME3-211ENST00000568561 SPEGQ15772 3267 aa16.4■□□□□ 0.22
NME3-211ENST00000568561 A0A1W2PQF6 199 aa16.4■□□□□ 0.22
NME3-211ENST00000568561 F13A1P00488 732 aa16.4■□□□□ 0.22
NME3-211ENST00000568561 ASPAP45381 313 aa16.4■□□□□ 0.22
NME3-211ENST00000568561 AP3M2P53677 418 aa16.4■□□□□ 0.22
NME3-211ENST00000568561 LMAN2Q12907 356 aa16.4■□□□□ 0.22
NME3-211ENST00000568561 TOGARAM2Q6ZUX3 1019 aa16.4■□□□□ 0.22
NME3-211ENST00000568561 TRMT11Q7Z4G4 463 aaKnown RBP16.4■□□□□ 0.22
NME3-211ENST00000568561 CEP57L1Q8IYX8 460 aa16.4■□□□□ 0.22
NME3-211ENST00000568561 OR2I1PQ8NGU4 316 aa16.4■□□□□ 0.22
NME3-211ENST00000568561 GOLGA5Q8TBA6 731 aa16.4■□□□□ 0.22
NME3-211ENST00000568561 SCNM1Q9BWG6 230 aa16.4■□□□□ 0.22
NME3-211ENST00000568561 GTPBP2Q9BX10 602 aaKnown RBP16.4■□□□□ 0.22
NME3-211ENST00000568561 BBS2Q9BXC9 721 aa16.4■□□□□ 0.22
NME3-211ENST00000568561 KLF16Q9BXK1 252 aaPredicted RBP16.4■□□□□ 0.22
NME3-211ENST00000568561 ADAM33Q9BZ11 813 aa16.4■□□□□ 0.22
NME3-211ENST00000568561 SLC6A17Q9H1V8 727 aa16.4■□□□□ 0.22
NME3-211ENST00000568561 CD93Q9NPY3 652 aa16.4■□□□□ 0.22
NME3-211ENST00000568561 EXOC1Q9NV70 894 aa16.4■□□□□ 0.22
NME3-211ENST00000568561 DMAC2Q9NW81 257 aa16.4■□□□□ 0.22
NME3-211ENST00000568561 PILRBQ9UKJ0 227 aa16.4■□□□□ 0.22
NME3-211ENST00000568561 ZMIZ1Q9ULJ6 1067 aa16.4■□□□□ 0.22
NME3-211ENST00000568561 CYP8B1Q9UNU6 501 aa16.4■□□□□ 0.22
NME3-211ENST00000568561 RAD54BQ9Y620 910 aa16.4■□□□□ 0.22
NME3-211ENST00000568561 SPAARA0A1B0GVQ0 90 aa16.39■□□□□ 0.21
NME3-211ENST00000568561 ACTN4O43707 911 aaKnown RBP16.39■□□□□ 0.21
NME3-211ENST00000568561 HLA-DRAP01903 254 aa16.39■□□□□ 0.21
NME3-211ENST00000568561 NR3C1P04150 777 aa16.39■□□□□ 0.21
NME3-211ENST00000568561 ZSCAN22P10073 491 aaPredicted RBP16.39■□□□□ 0.21
NME3-211ENST00000568561 TYRP14679 529 aa16.39■□□□□ 0.21
NME3-211ENST00000568561 NTSR1P30989 418 aa16.39■□□□□ 0.21
NME3-211ENST00000568561 PIK3CAP42336 1068 aa16.39■□□□□ 0.21
NME3-211ENST00000568561 PKP1Q13835 747 aa16.39■□□□□ 0.21
NME3-211ENST00000568561 BYSLQ13895 437 aaKnown RBP16.39■□□□□ 0.21
NME3-211ENST00000568561 ZACNQ401N2 412 aa16.39■□□□□ 0.21
NME3-211ENST00000568561 KMT5BQ4FZB7 885 aa16.39■□□□□ 0.21
NME3-211ENST00000568561 C1orf220Q5T0J3 134 aa16.39■□□□□ 0.21
NME3-211ENST00000568561 CEP135Q66GS9 1140 aa16.39■□□□□ 0.21
NME3-211ENST00000568561 CLEC20AQ6ZU45 233 aa16.39■□□□□ 0.21
NME3-211ENST00000568561 CHPFQ8IZ52 775 aa16.39■□□□□ 0.21
NME3-211ENST00000568561 TMEM121BQ9BXQ6 578 aaPredicted RBP16.39■□□□□ 0.21
NME3-211ENST00000568561 KCTD10Q9H3F6 313 aa16.39■□□□□ 0.21
NME3-211ENST00000568561 NMUR1Q9HB89 426 aa16.39■□□□□ 0.21
NME3-211ENST00000568561 CSNK1G1Q9HCP0 422 aa16.39■□□□□ 0.21
NME3-211ENST00000568561 TLR8Q9NR97 1041 aaKnown RBP16.39■□□□□ 0.21
NME3-211ENST00000568561 COMMD8Q9NX08 183 aa16.39■□□□□ 0.21
NME3-211ENST00000568561 IGHV1OR15-9A0A0B4J2B8 117 aa16.38■□□□□ 0.21
NME3-211ENST00000568561 PRRT4C9JH25 899 aa16.38■□□□□ 0.21
NME3-211ENST00000568561 AP5Z1O43299 807 aa16.38■□□□□ 0.21
NME3-211ENST00000568561 HYAL3O43820 417 aaPredicted RBP16.38■□□□□ 0.21
NME3-211ENST00000568561 CACNG3O60359 315 aa16.38■□□□□ 0.21
NME3-211ENST00000568561 ASS1P00966 412 aaKnown RBP16.38■□□□□ 0.21
NME3-211ENST00000568561 FAM200BP0CF97 657 aa16.38■□□□□ 0.21
NME3-211ENST00000568561 P4HA1P13674 534 aa16.38■□□□□ 0.21
NME3-211ENST00000568561 NDUFV2P19404 249 aa16.38■□□□□ 0.21
NME3-211ENST00000568561 SGSM1Q2NKQ1 1148 aa16.38■□□□□ 0.21
NME3-211ENST00000568561 PEAR1Q5VY43 1037 aaPredicted RBP16.38■□□□□ 0.21
NME3-211ENST00000568561 SLC23A3Q6PIS1 610 aa16.38■□□□□ 0.21
NME3-211ENST00000568561 HTR3DQ70Z44 454 aa16.38■□□□□ 0.21
NME3-211ENST00000568561 SV2AQ7L0J3 742 aa16.38■□□□□ 0.21
NME3-211ENST00000568561 CRYBG2Q8N1P7 616 aa16.38■□□□□ 0.21
NME3-211ENST00000568561 IPO4Q8TEX9 1081 aaKnown RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms