RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 EIF1ADQ8N9N8 165 aaKnown RBP7.37□□□□□ -1.23
SMG1-215ENST00000568239 STKLD1Q8NE28 680 aa7.37□□□□□ -1.23
SMG1-215ENST00000568239 SPATA18Q8TC71 538 aa7.37□□□□□ -1.23
SMG1-215ENST00000568239 P3H4Q92791 437 aa7.37□□□□□ -1.23
SMG1-215ENST00000568239 APBB2Q92870 758 aa7.37□□□□□ -1.23
SMG1-215ENST00000568239 ZIM3Q96PE6 472 aa7.37□□□□□ -1.23
SMG1-215ENST00000568239 POPDC2Q9HBU9 364 aa7.37□□□□□ -1.23
SMG1-215ENST00000568239 DMAP1Q9NPF5 467 aaPredicted RBP7.37□□□□□ -1.23
SMG1-215ENST00000568239 GRHL1Q9NZI5 618 aa7.37□□□□□ -1.23
SMG1-215ENST00000568239 ADAM28Q9UKQ2 775 aa7.37□□□□□ -1.23
SMG1-215ENST00000568239 PCDHB8Q9UN66 801 aa7.37□□□□□ -1.23
SMG1-215ENST00000568239 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.36□□□□□ -1.23
SMG1-215ENST00000568239 ZBED1O96006 694 aa7.36□□□□□ -1.23
SMG1-215ENST00000568239 PECAM1P16284 738 aaPredicted RBP7.36□□□□□ -1.23
SMG1-215ENST00000568239 TYMPP19971 482 aa7.36□□□□□ -1.23
SMG1-215ENST00000568239 NOS2P35228 1153 aa7.36□□□□□ -1.23
SMG1-215ENST00000568239 HSD17B3P37058 310 aa7.36□□□□□ -1.23
SMG1-215ENST00000568239 ITGA8P53708 1063 aa7.36□□□□□ -1.23
SMG1-215ENST00000568239 DEUP1Q05D60 604 aa7.36□□□□□ -1.23
SMG1-215ENST00000568239 CTXN3Q4LDR2 81 aa7.36□□□□□ -1.23
SMG1-215ENST00000568239 VARS2Q5ST30 1063 aaKnown RBP7.36□□□□□ -1.23
SMG1-215ENST00000568239 SPOUT1Q5T280 376 aaKnown RBP7.36□□□□□ -1.23
SMG1-215ENST00000568239 SDHAF4Q5VUM1 108 aa7.36□□□□□ -1.23
SMG1-215ENST00000568239 ZDHHC24Q6UX98 284 aa7.36□□□□□ -1.23
SMG1-215ENST00000568239 C4orf50Q6ZRC1 276 aa7.36□□□□□ -1.23
SMG1-215ENST00000568239 BBS12Q6ZW61 710 aa7.36□□□□□ -1.23
SMG1-215ENST00000568239 TMC3Q7Z5M5 1100 aa7.36□□□□□ -1.23
SMG1-215ENST00000568239 CCDC33Q8N5R6 958 aa7.36□□□□□ -1.23
SMG1-215ENST00000568239 GLIS1Q8NBF1 620 aa7.36□□□□□ -1.23
SMG1-215ENST00000568239 TTC13Q8NBP0 860 aa7.36□□□□□ -1.23
SMG1-215ENST00000568239 OR2W6PQ8NHA6 318 aa7.36□□□□□ -1.23
SMG1-215ENST00000568239 SCAMP5Q8TAC9 235 aa7.36□□□□□ -1.23
SMG1-215ENST00000568239 RSAD2Q8WXG1 361 aa7.36□□□□□ -1.23
SMG1-215ENST00000568239 SNF8Q96H20 258 aa7.36□□□□□ -1.23
SMG1-215ENST00000568239 CASD1Q96PB1 797 aa7.36□□□□□ -1.23
SMG1-215ENST00000568239 NCAPGQ9BPX3 1015 aa7.36□□□□□ -1.23
SMG1-215ENST00000568239 ELAC1Q9H777 363 aaKnown RBP7.36□□□□□ -1.23
SMG1-215ENST00000568239 CNGB3Q9NQW8 809 aa7.36□□□□□ -1.23
SMG1-215ENST00000568239 TMPRSS4Q9NRS4 437 aa7.36□□□□□ -1.23
SMG1-215ENST00000568239 ZDHHC18Q9NUE0 388 aa7.36□□□□□ -1.23
SMG1-215ENST00000568239 CALCOCO1Q9P1Z2 691 aa7.36□□□□□ -1.23
SMG1-215ENST00000568239 AP4E1Q9UPM8 1137 aa7.36□□□□□ -1.23
SMG1-215ENST00000568239 PLAAQ9Y263 795 aa7.36□□□□□ -1.23
SMG1-215ENST00000568239 H7C0C1 242 aa7.36□□□□□ -1.23
SMG1-215ENST00000568239 AGPSO00116 658 aa7.36□□□□□ -1.23
SMG1-215ENST00000568239 MCF2LO15068 1137 aa7.36□□□□□ -1.23
SMG1-215ENST00000568239 INPPL1O15357 1258 aa7.36□□□□□ -1.23
SMG1-215ENST00000568239 DAB1O75553 588 aa7.36□□□□□ -1.23
SMG1-215ENST00000568239 FBXO21O94952 628 aa7.36□□□□□ -1.23
SMG1-215ENST00000568239 RBP3P10745 1247 aa7.36□□□□□ -1.23
SMG1-215ENST00000568239 COL6A1P12109 1028 aa7.36□□□□□ -1.23
SMG1-215ENST00000568239 GBP1P32455 592 aa7.36□□□□□ -1.23
SMG1-215ENST00000568239 PTPN7P35236 360 aa7.36□□□□□ -1.23
SMG1-215ENST00000568239 SCNN1AP37088 669 aa7.36□□□□□ -1.23
SMG1-215ENST00000568239 HSPA9P38646 679 aaKnown RBP7.36□□□□□ -1.23
SMG1-215ENST00000568239 ATP5OP48047 213 aa7.36□□□□□ -1.23
SMG1-215ENST00000568239 VCPP55072 806 aaKnown RBP7.36□□□□□ -1.23
SMG1-215ENST00000568239 DAOAP59103 153 aa7.36□□□□□ -1.23
SMG1-215ENST00000568239 EIF3EP60228 445 aaKnown RBP7.36□□□□□ -1.23
SMG1-215ENST00000568239 GPS1Q13098 491 aa7.36□□□□□ -1.23
SMG1-215ENST00000568239 PTK6Q13882 451 aa7.36□□□□□ -1.23
SMG1-215ENST00000568239 TFDP2Q14188 446 aa7.36□□□□□ -1.23
SMG1-215ENST00000568239 PDK2Q15119 407 aa7.36□□□□□ -1.23
SMG1-215ENST00000568239 P3H1Q32P28 736 aa7.36□□□□□ -1.23
SMG1-215ENST00000568239 DARS2Q6PI48 645 aaKnown RBP7.36□□□□□ -1.23
SMG1-215ENST00000568239 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.36□□□□□ -1.23
SMG1-215ENST00000568239 SYDE1Q6ZW31 735 aaPredicted RBP7.36□□□□□ -1.23
SMG1-215ENST00000568239 ANKRD33Q7Z3H0 272 aa7.36□□□□□ -1.23
SMG1-215ENST00000568239 NPAS4Q8IUM7 802 aa7.36□□□□□ -1.23
SMG1-215ENST00000568239 PYROXD2Q8N2H3 581 aa7.36□□□□□ -1.23
SMG1-215ENST00000568239 UHMK1Q8TAS1 419 aaKnown RBP7.36□□□□□ -1.23
SMG1-215ENST00000568239 LRRN4Q8WUT4 740 aa7.36□□□□□ -1.23
SMG1-215ENST00000568239 SLCO2A1Q92959 643 aa7.36□□□□□ -1.23
SMG1-215ENST00000568239 RNF34Q969K3 372 aa7.36□□□□□ -1.23
SMG1-215ENST00000568239 PAWRQ96IZ0 340 aaKnown RBP7.36□□□□□ -1.23
SMG1-215ENST00000568239 RNF157Q96PX1 679 aa7.36□□□□□ -1.23
SMG1-215ENST00000568239 COLEC11Q9BWP8 271 aa7.36□□□□□ -1.23
SMG1-215ENST00000568239 GPR62Q9BZJ7 368 aa7.36□□□□□ -1.23
SMG1-215ENST00000568239 PCDH18Q9HCL0 1135 aa7.36□□□□□ -1.23
SMG1-215ENST00000568239 ANAPC5Q9UJX4 755 aa7.36□□□□□ -1.23
SMG1-215ENST00000568239 BHMG1C9JSJ3 638 aaPredicted RBP7.35□□□□□ -1.23
SMG1-215ENST00000568239 APOC4-APOC2K7ER74 178 aa7.35□□□□□ -1.23
SMG1-215ENST00000568239 HOXA2O43364 376 aa7.35□□□□□ -1.23
SMG1-215ENST00000568239 CREB3O43889 395 aa7.35□□□□□ -1.23
SMG1-215ENST00000568239 RNF40O75150 1001 aa7.35□□□□□ -1.23
SMG1-215ENST00000568239 SYF2O95926 243 aaKnown RBP7.35□□□□□ -1.23
SMG1-215ENST00000568239 APOC2P02655 101 aa7.35□□□□□ -1.23
SMG1-215ENST00000568239 LTFP02788 710 aa7.35□□□□□ -1.23
SMG1-215ENST00000568239 CPB1P15086 417 aa7.35□□□□□ -1.23
SMG1-215ENST00000568239 ITIH2P19823 946 aa7.35□□□□□ -1.23
SMG1-215ENST00000568239 PAX3P23760 479 aa7.35□□□□□ -1.23
SMG1-215ENST00000568239 SLC11A1P49279 550 aa7.35□□□□□ -1.23
SMG1-215ENST00000568239 PMS2P54278 862 aa7.35□□□□□ -1.23
SMG1-215ENST00000568239 IFFO1Q0D2I5 559 aa7.35□□□□□ -1.23
SMG1-215ENST00000568239 ANKRD20A8PQ5CZ79 823 aa7.35□□□□□ -1.23
SMG1-215ENST00000568239 CEP85LQ5SZL2 805 aa7.35□□□□□ -1.23
SMG1-215ENST00000568239 IZUMO3Q5VZ72 239 aa7.35□□□□□ -1.23
SMG1-215ENST00000568239 ALS2CLQ60I27 953 aa7.35□□□□□ -1.23
SMG1-215ENST00000568239 STRADAQ7RTN6 431 aa7.35□□□□□ -1.23
SMG1-215ENST00000568239 TMCO2Q7Z6W1 182 aaPredicted RBP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms