RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 PDGFBP01127 241 aaPredicted RBP18.05■□□□□ 0.48
COMMD4-220ENST00000567720 ACADSBP45954 432 aa18.05■□□□□ 0.48
COMMD4-220ENST00000567720 NOMO3P69849 1222 aa18.05■□□□□ 0.48
COMMD4-220ENST00000567720 CDR2Q01850 454 aa18.05■□□□□ 0.48
COMMD4-220ENST00000567720 ARHGAP29Q52LW3 1261 aa18.05■□□□□ 0.48
COMMD4-220ENST00000567720 C10orf120Q5SQS8 335 aa18.05■□□□□ 0.48
COMMD4-220ENST00000567720 TRIM68Q6AZZ1 485 aa18.05■□□□□ 0.48
COMMD4-220ENST00000567720 KLHDC10Q6PID8 442 aa18.05■□□□□ 0.48
COMMD4-220ENST00000567720 TMEM110Q86TL2 294 aa18.05■□□□□ 0.48
COMMD4-220ENST00000567720 GAS2L3Q86XJ1 694 aa18.05■□□□□ 0.48
COMMD4-220ENST00000567720 ZNF677Q86XU0 584 aa18.05■□□□□ 0.48
COMMD4-220ENST00000567720 SIX5Q8N196 739 aa18.05■□□□□ 0.48
COMMD4-220ENST00000567720 ZNF276Q8N554 614 aa18.05■□□□□ 0.48
COMMD4-220ENST00000567720 IRGQQ8WZA9 623 aa18.05■□□□□ 0.48
COMMD4-220ENST00000567720 IRF7Q92985 503 aa18.05■□□□□ 0.48
COMMD4-220ENST00000567720 WBP2Q969T9 261 aa18.05■□□□□ 0.48
COMMD4-220ENST00000567720 NACA2Q9H009 215 aa18.05■□□□□ 0.48
COMMD4-220ENST00000567720 RBSNQ9H1K0 784 aa18.05■□□□□ 0.48
COMMD4-220ENST00000567720 CFAP97Q9P2B7 532 aa18.05■□□□□ 0.48
COMMD4-220ENST00000567720 FBXL21Q9UKT6 434 aa18.05■□□□□ 0.48
COMMD4-220ENST00000567720 MYO6Q9UM54 1294 aa18.05■□□□□ 0.48
COMMD4-220ENST00000567720 CEP83Q9Y592 693 aa18.05■□□□□ 0.48
COMMD4-220ENST00000567720 WNT6Q9Y6F9 365 aa18.05■□□□□ 0.48
COMMD4-220ENST00000567720 ITIH6Q6UXX5 1313 aa18.04■□□□□ 0.48
COMMD4-220ENST00000567720 LSM8O95777 96 aaKnown RBP18.04■□□□□ 0.48
COMMD4-220ENST00000567720 LTFP02788 710 aa18.04■□□□□ 0.48
COMMD4-220ENST00000567720 ERBB2P04626 1255 aa18.04■□□□□ 0.48
COMMD4-220ENST00000567720 IRF1P10914 325 aa18.04■□□□□ 0.48
COMMD4-220ENST00000567720 RALAP11233 206 aa18.04■□□□□ 0.48
COMMD4-220ENST00000567720 PFKPQ01813 784 aa18.04■□□□□ 0.48
COMMD4-220ENST00000567720 TNK2Q07912 1038 aa18.04■□□□□ 0.48
COMMD4-220ENST00000567720 BSPRYQ5W0U4 402 aa18.04■□□□□ 0.48
COMMD4-220ENST00000567720 SCUBE3Q8IX30 993 aa18.04■□□□□ 0.48
COMMD4-220ENST00000567720 TMEM35BQ8NCS4 154 aa18.04■□□□□ 0.48
COMMD4-220ENST00000567720 EDEM1Q92611 657 aa18.04■□□□□ 0.48
COMMD4-220ENST00000567720 PPP1R13BQ96KQ4 1090 aa18.04■□□□□ 0.48
COMMD4-220ENST00000567720 FAM83CQ9BQN1 747 aa18.04■□□□□ 0.48
COMMD4-220ENST00000567720 PDCL3Q9H2J4 239 aa18.04■□□□□ 0.48
COMMD4-220ENST00000567720 TRPV5Q9NQA5 729 aa18.04■□□□□ 0.48
COMMD4-220ENST00000567720 HPS4Q9NQG7 708 aa18.04■□□□□ 0.48
COMMD4-220ENST00000567720 HEBP1Q9NRV9 189 aa18.04■□□□□ 0.48
COMMD4-220ENST00000567720 GKN1Q9NS71 199 aa18.04■□□□□ 0.48
COMMD4-220ENST00000567720 WNT16Q9UBV4 365 aa18.04■□□□□ 0.48
COMMD4-220ENST00000567720 RASAL2Q9UJF2 1139 aa18.04■□□□□ 0.48
COMMD4-220ENST00000567720 AP5Z1O43299 807 aa18.03■□□□□ 0.48
COMMD4-220ENST00000567720 GYPCP04921 128 aa18.03■□□□□ 0.48
COMMD4-220ENST00000567720 ARSAP15289 507 aa18.03■□□□□ 0.48
COMMD4-220ENST00000567720 FERP16591 822 aa18.03■□□□□ 0.48
COMMD4-220ENST00000567720 ATP5C1P36542 298 aaKnown RBP18.03■□□□□ 0.48
COMMD4-220ENST00000567720 PLCB2Q00722 1185 aa18.03■□□□□ 0.48
COMMD4-220ENST00000567720 EFEMP1Q12805 493 aa18.03■□□□□ 0.48
COMMD4-220ENST00000567720 MLF2Q15773 248 aaPredicted RBP18.03■□□□□ 0.48
COMMD4-220ENST00000567720 NAA35Q5VZE5 725 aa18.03■□□□□ 0.48
COMMD4-220ENST00000567720 BTBD8Q5XKL5 378 aa18.03■□□□□ 0.48
COMMD4-220ENST00000567720 FAM183BPQ6ZVS7 135 aa18.03■□□□□ 0.48
COMMD4-220ENST00000567720 DDX42Q86XP3 938 aaKnown RBP eCLIP18.03■□□□□ 0.48
COMMD4-220ENST00000567720 MIB1Q86YT6 1006 aa18.03■□□□□ 0.48
COMMD4-220ENST00000567720 OSCP1Q8WVF1 389 aa18.03■□□□□ 0.48
COMMD4-220ENST00000567720 NOX5Q96PH1 765 aa18.03■□□□□ 0.48
COMMD4-220ENST00000567720 CDK5RAP1Q96SZ6 601 aaKnown RBP18.03■□□□□ 0.48
COMMD4-220ENST00000567720 SYT11Q9BT88 431 aa18.03■□□□□ 0.48
COMMD4-220ENST00000567720 KLF16Q9BXK1 252 aaPredicted RBP18.03■□□□□ 0.48
COMMD4-220ENST00000567720 GTSE1Q9NYZ3 720 aa18.03■□□□□ 0.48
COMMD4-220ENST00000567720 DNMT3LQ9UJW3 386 aa18.03■□□□□ 0.48
COMMD4-220ENST00000567720 A0A1W2PQJ5 194 aa18.02■□□□□ 0.48
COMMD4-220ENST00000567720 SHISA7A6NL88 538 aa18.02■□□□□ 0.48
COMMD4-220ENST00000567720 SART1O43290 800 aaKnown RBP18.02■□□□□ 0.48
COMMD4-220ENST00000567720 CBFA2T2O43439 604 aa18.02■□□□□ 0.48
COMMD4-220ENST00000567720 GREM1O60565 184 aa18.02■□□□□ 0.48
COMMD4-220ENST00000567720 CYP1A1P04798 512 aaPredicted RBP18.02■□□□□ 0.48
COMMD4-220ENST00000567720 FYNP06241 537 aa18.02■□□□□ 0.48
COMMD4-220ENST00000567720 TPM3P06753 285 aa18.02■□□□□ 0.48
COMMD4-220ENST00000567720 EML3Q32P44 896 aa18.02■□□□□ 0.48
COMMD4-220ENST00000567720 CWF19L1Q69YN2 538 aaKnown RBP18.02■□□□□ 0.48
COMMD4-220ENST00000567720 MSANTD2Q6P1R3 559 aa18.02■□□□□ 0.48
COMMD4-220ENST00000567720 SARM1Q6SZW1 724 aa18.02■□□□□ 0.48
COMMD4-220ENST00000567720 OLFML1Q6UWY5 402 aa18.02■□□□□ 0.48
COMMD4-220ENST00000567720 RSRC2Q7L4I2 434 aaKnown RBP18.02■□□□□ 0.48
COMMD4-220ENST00000567720 IRF2BP2Q7Z5L9 587 aa18.02■□□□□ 0.48
COMMD4-220ENST00000567720 TADA2BQ86TJ2 420 aa18.02■□□□□ 0.48
COMMD4-220ENST00000567720 IPO4Q8TEX9 1081 aaKnown RBP18.02■□□□□ 0.48
COMMD4-220ENST00000567720 FAM149B1Q96BN6 582 aa18.02■□□□□ 0.48
COMMD4-220ENST00000567720 PCDHB18PQ96TA0 734 aa18.02■□□□□ 0.48
COMMD4-220ENST00000567720 EDEM3Q9BZQ6 932 aa18.02■□□□□ 0.48
COMMD4-220ENST00000567720 EBF3Q9H4W6 596 aa18.02■□□□□ 0.48
COMMD4-220ENST00000567720 ABCC13Q9NSE7 274 aa18.02■□□□□ 0.48
COMMD4-220ENST00000567720 THG1LQ9NWX6 298 aaKnown RBP18.02■□□□□ 0.48
COMMD4-220ENST00000567720 OTOL1A6NHN0 477 aaPredicted RBP18.01■□□□□ 0.47
COMMD4-220ENST00000567720 GPR37L1O60883 481 aa18.01■□□□□ 0.47
COMMD4-220ENST00000567720 SOX9P48436 509 aa18.01■□□□□ 0.47
COMMD4-220ENST00000567720 IFNAR2P48551 515 aa18.01■□□□□ 0.47
COMMD4-220ENST00000567720 PDGFRLQ15198 375 aa18.01■□□□□ 0.47
COMMD4-220ENST00000567720 TAF5Q15542 800 aa18.01■□□□□ 0.47
COMMD4-220ENST00000567720 ASIC2Q16515 512 aa18.01■□□□□ 0.47
COMMD4-220ENST00000567720 SLC44A4Q53GD3 710 aa18.01■□□□□ 0.47
COMMD4-220ENST00000567720 C2CD6Q53TS8 623 aa18.01■□□□□ 0.47
COMMD4-220ENST00000567720 CC2D1AQ6P1N0 951 aaPredicted RBP18.01■□□□□ 0.47
COMMD4-220ENST00000567720 TPRG1Q6ZUI0 275 aa18.01■□□□□ 0.47
COMMD4-220ENST00000567720 TTC8Q8TAM2 541 aa18.01■□□□□ 0.47
COMMD4-220ENST00000567720 CPA5Q8WXQ8 436 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms