RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 LINC01465Q8N7H1 131 aa3.99□□□□□ -1.77
CDH1-211ENST00000567320 IL31RAQ8NI17 732 aa3.99□□□□□ -1.77
CDH1-211ENST00000567320 WDYHV1Q96HA8 205 aa3.99□□□□□ -1.77
CDH1-211ENST00000567320 HIC2Q96JB3 615 aa3.99□□□□□ -1.77
CDH1-211ENST00000567320 ZFYVE19Q96K21 471 aa3.99□□□□□ -1.77
CDH1-211ENST00000567320 NLRP4Q96MN2 994 aa3.99□□□□□ -1.77
CDH1-211ENST00000567320 AIFM3Q96NN9 605 aa3.99□□□□□ -1.77
CDH1-211ENST00000567320 B3GNT5Q9BYG0 378 aa3.99□□□□□ -1.77
CDH1-211ENST00000567320 KRTAP2-2Q9BYT5 123 aa3.99□□□□□ -1.77
CDH1-211ENST00000567320 RHOBTB2Q9BYZ6 727 aa3.99□□□□□ -1.77
CDH1-211ENST00000567320 DPH1Q9BZG8 443 aa3.99□□□□□ -1.77
CDH1-211ENST00000567320 DNMT3BQ9UBC3 853 aaKnown RBP3.99□□□□□ -1.77
CDH1-211ENST00000567320 CPNE7Q9UBL6 633 aa3.99□□□□□ -1.77
CDH1-211ENST00000567320 ASAP1Q9ULH1 1129 aa3.99□□□□□ -1.77
CDH1-211ENST00000567320 USP19O94966 1318 aa3.98□□□□□ -1.77
CDH1-211ENST00000567320 CAPN8A6NHC0 703 aa3.98□□□□□ -1.77
CDH1-211ENST00000567320 PRR23D1E9PI22 279 aaPredicted RBP3.98□□□□□ -1.77
CDH1-211ENST00000567320 INPPL1O15357 1258 aa3.98□□□□□ -1.77
CDH1-211ENST00000567320 CCP110O43303 1012 aa3.98□□□□□ -1.77
CDH1-211ENST00000567320 PARP1P09874 1014 aaKnown RBP3.98□□□□□ -1.77
CDH1-211ENST00000567320 PRR23D2P0DMB1 279 aaPredicted RBP3.98□□□□□ -1.77
CDH1-211ENST00000567320 TPH1P17752 444 aa3.98□□□□□ -1.77
CDH1-211ENST00000567320 KLRC1P26715 233 aa3.98□□□□□ -1.77
CDH1-211ENST00000567320 NANOS2P60321 138 aaKnown RBP3.98□□□□□ -1.77
CDH1-211ENST00000567320 TXNL4AP83876 142 aaKnown RBP3.98□□□□□ -1.77
CDH1-211ENST00000567320 TIAL1Q01085 375 aaKnown RBP eCLIP3.98□□□□□ -1.77
CDH1-211ENST00000567320 DEUP1Q05D60 604 aa3.98□□□□□ -1.77
CDH1-211ENST00000567320 PIN1Q13526 163 aaPredicted RBP3.98□□□□□ -1.77
CDH1-211ENST00000567320 ERV3-1Q14264 604 aa3.98□□□□□ -1.77
CDH1-211ENST00000567320 MANEAQ5SRI9 462 aa3.98□□□□□ -1.77
CDH1-211ENST00000567320 CLEC9AQ6UXN8 241 aa3.98□□□□□ -1.77
CDH1-211ENST00000567320 MAEAQ7L5Y9 396 aa3.98□□□□□ -1.77
CDH1-211ENST00000567320 PIP4P1Q86T03 277 aa3.98□□□□□ -1.77
CDH1-211ENST00000567320 P3H2Q8IVL5 708 aa3.98□□□□□ -1.77
CDH1-211ENST00000567320 MMP21Q8N119 569 aa3.98□□□□□ -1.77
CDH1-211ENST00000567320 SPATA3Q8NHX4 192 aa3.98□□□□□ -1.77
CDH1-211ENST00000567320 MAML1Q92585 1016 aa3.98□□□□□ -1.77
CDH1-211ENST00000567320 HIST1H2AAQ96QV6 131 aa3.98□□□□□ -1.77
CDH1-211ENST00000567320 TAAR9Q96RI9 348 aa3.98□□□□□ -1.77
CDH1-211ENST00000567320 VPS33BQ9H267 617 aa3.98□□□□□ -1.77
CDH1-211ENST00000567320 TRIM36Q9NQ86 728 aa3.98□□□□□ -1.77
CDH1-211ENST00000567320 DDX56Q9NY93 547 aaKnown RBP3.98□□□□□ -1.77
CDH1-211ENST00000567320 ITGB1BP2Q9UKP3 347 aa3.98□□□□□ -1.77
CDH1-211ENST00000567320 PROCRQ9UNN8 238 aa3.98□□□□□ -1.77
CDH1-211ENST00000567320 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.98□□□□□ -1.77
CDH1-211ENST00000567320 IGLV5-39A0A0G2JS06 123 aa3.97□□□□□ -1.77
CDH1-211ENST00000567320 E2F8A0AVK6 867 aa3.97□□□□□ -1.77
CDH1-211ENST00000567320 MBD3L4A6NDZ8 208 aaPredicted RBP3.97□□□□□ -1.77
CDH1-211ENST00000567320 MBD3L3A6NE82 208 aaPredicted RBP3.97□□□□□ -1.77
CDH1-211ENST00000567320 IGSF3O75054 1194 aa3.97□□□□□ -1.77
CDH1-211ENST00000567320 ATF7P17544 494 aaPredicted RBP3.97□□□□□ -1.77
CDH1-211ENST00000567320 ADRA1DP25100 572 aa3.97□□□□□ -1.77
CDH1-211ENST00000567320 NTSR1P30989 418 aa3.97□□□□□ -1.77
CDH1-211ENST00000567320 MCM5P33992 734 aa3.97□□□□□ -1.77
CDH1-211ENST00000567320 AGFG1P52594 562 aaKnown RBP3.97□□□□□ -1.77
CDH1-211ENST00000567320 TTF1Q15361 905 aaPredicted RBP3.97□□□□□ -1.77
CDH1-211ENST00000567320 ST3GAL2Q16842 350 aa3.97□□□□□ -1.77
CDH1-211ENST00000567320 C3orf38Q5JPI3 329 aa3.97□□□□□ -1.77
CDH1-211ENST00000567320 YAF2Q8IY57 180 aa3.97□□□□□ -1.77
CDH1-211ENST00000567320 CHPFQ8IZ52 775 aa3.97□□□□□ -1.77
CDH1-211ENST00000567320 PNPLA1Q8N8W4 532 aa3.97□□□□□ -1.77
CDH1-211ENST00000567320 MPLKIPQ8TAP9 179 aa3.97□□□□□ -1.77
CDH1-211ENST00000567320 SLC25A28Q96A46 364 aa3.97□□□□□ -1.77
CDH1-211ENST00000567320 EDC3Q96F86 508 aaKnown RBP3.97□□□□□ -1.77
CDH1-211ENST00000567320 NUAK2Q9H093 628 aa3.97□□□□□ -1.77
CDH1-211ENST00000567320 MLXIPQ9HAP2 919 aa3.97□□□□□ -1.77
CDH1-211ENST00000567320 ATP6V0A4Q9HBG4 840 aa3.97□□□□□ -1.77
CDH1-211ENST00000567320 TMEM45AQ9NWC5 275 aa3.97□□□□□ -1.77
CDH1-211ENST00000567320 STEAP1Q9UHE8 339 aa3.97□□□□□ -1.77
CDH1-211ENST00000567320 TPCN1Q9ULQ1 816 aa3.97□□□□□ -1.77
CDH1-211ENST00000567320 NOP58Q9Y2X3 529 aaKnown RBP3.97□□□□□ -1.77
CDH1-211ENST00000567320 TRIM43BA6NCK2 446 aa3.96□□□□□ -1.78
CDH1-211ENST00000567320 AQP7P3A6NL99 342 aa3.96□□□□□ -1.78
CDH1-211ENST00000567320 AGPSO00116 658 aa3.96□□□□□ -1.78
CDH1-211ENST00000567320 CA12O43570 354 aa3.96□□□□□ -1.78
CDH1-211ENST00000567320 CNOT3O75175 753 aaKnown RBP3.96□□□□□ -1.78
CDH1-211ENST00000567320 TUSC2O75896 110 aa3.96□□□□□ -1.78
CDH1-211ENST00000567320 TGFB3P10600 412 aa3.96□□□□□ -1.78
CDH1-211ENST00000567320 ACVR2AP27037 513 aa3.96□□□□□ -1.78
CDH1-211ENST00000567320 THBS4P35443 961 aa3.96□□□□□ -1.78
CDH1-211ENST00000567320 IL6STP40189 918 aaPredicted RBP3.96□□□□□ -1.78
CDH1-211ENST00000567320 CPT1AP50416 773 aa3.96□□□□□ -1.78
CDH1-211ENST00000567320 RAB27AP51159 221 aa3.96□□□□□ -1.78
CDH1-211ENST00000567320 ANAPC15P60006 121 aa3.96□□□□□ -1.78
CDH1-211ENST00000567320 KRTAP10-6P60371 365 aaPredicted RBP3.96□□□□□ -1.78
CDH1-211ENST00000567320 SRSF1Q07955 248 aaKnown RBP eCLIP3.96□□□□□ -1.78
CDH1-211ENST00000567320 CCDC15Q0P6D6 951 aa3.96□□□□□ -1.78
CDH1-211ENST00000567320 PRTGQ2VWP7 1150 aa3.96□□□□□ -1.78
CDH1-211ENST00000567320 PPP4R4Q6NUP7 873 aa3.96□□□□□ -1.78
CDH1-211ENST00000567320 B3GNT9Q6UX72 402 aa3.96□□□□□ -1.78
CDH1-211ENST00000567320 B4GALNT4Q76KP1 1039 aa3.96□□□□□ -1.78
CDH1-211ENST00000567320 MICU3Q86XE3 530 aa3.96□□□□□ -1.78
CDH1-211ENST00000567320 FSTL5Q8N475 847 aaPredicted RBP3.96□□□□□ -1.78
CDH1-211ENST00000567320 METTL25Q8N6Q8 603 aa3.96□□□□□ -1.78
CDH1-211ENST00000567320 PIGKQ92643 395 aa3.96□□□□□ -1.78
CDH1-211ENST00000567320 TRIM43Q96BQ3 446 aaPredicted RBP3.96□□□□□ -1.78
CDH1-211ENST00000567320 CINPQ9BW66 212 aaPredicted RBP3.96□□□□□ -1.78
CDH1-211ENST00000567320 STK32BQ9NY57 414 aa3.96□□□□□ -1.78
CDH1-211ENST00000567320 AFF4Q9UHB7 1163 aaKnown RBP3.96□□□□□ -1.78
CDH1-211ENST00000567320 ZNF112Q9UJU3 913 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms