RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 CCSER2Q9H7U1 834 aa12.76□□□□□ -0.37
SF3B3-208ENST00000567250 NMUR1Q9HB89 426 aa12.76□□□□□ -0.37
SF3B3-208ENST00000567250 ASNSD1Q9NWL6 643 aa12.76□□□□□ -0.37
SF3B3-208ENST00000567250 CYTH4Q9UIA0 394 aa12.76□□□□□ -0.37
SF3B3-208ENST00000567250 DNMT3LQ9UJW3 386 aa12.76□□□□□ -0.37
SF3B3-208ENST00000567250 DUSP12Q9UNI6 340 aa12.76□□□□□ -0.37
SF3B3-208ENST00000567250 COL4A2P08572 1712 aa12.76□□□□□ -0.37
SF3B3-208ENST00000567250 YJEFN3A6XGL0 299 aa12.75□□□□□ -0.37
SF3B3-208ENST00000567250 HEPACAM2A8MVW5 462 aa12.75□□□□□ -0.37
SF3B3-208ENST00000567250 GOLGA6L6A8MZA4 724 aa12.75□□□□□ -0.37
SF3B3-208ENST00000567250 E7ENQ6 273 aa12.75□□□□□ -0.37
SF3B3-208ENST00000567250 CAPN9O14815 690 aa12.75□□□□□ -0.37
SF3B3-208ENST00000567250 PAPSS1O43252 624 aaPredicted RBP12.75□□□□□ -0.37
SF3B3-208ENST00000567250 HSF2BPO75031 334 aa12.75□□□□□ -0.37
SF3B3-208ENST00000567250 SERPING1P05155 500 aa12.75□□□□□ -0.37
SF3B3-208ENST00000567250 CALB1P05937 261 aa12.75□□□□□ -0.37
SF3B3-208ENST00000567250 SRFP11831 508 aa12.75□□□□□ -0.37
SF3B3-208ENST00000567250 ALADP13716 330 aa12.75□□□□□ -0.37
SF3B3-208ENST00000567250 TNFAIP3P21580 790 aa12.75□□□□□ -0.37
SF3B3-208ENST00000567250 SCNN1AP37088 669 aa12.75□□□□□ -0.37
SF3B3-208ENST00000567250 FCHO2Q0JRZ9 810 aa12.75□□□□□ -0.37
SF3B3-208ENST00000567250 MTF1Q14872 753 aa12.75□□□□□ -0.37
SF3B3-208ENST00000567250 ARHGAP29Q52LW3 1261 aa12.75□□□□□ -0.37
SF3B3-208ENST00000567250 EFHC1Q5JVL4 640 aa12.75□□□□□ -0.37
SF3B3-208ENST00000567250 BSPRYQ5W0U4 402 aa12.75□□□□□ -0.37
SF3B3-208ENST00000567250 TANGO2Q6ICL3 276 aa12.75□□□□□ -0.37
SF3B3-208ENST00000567250 VITQ6UXI7 678 aa12.75□□□□□ -0.37
SF3B3-208ENST00000567250 BEND5Q7L4P6 421 aa12.75□□□□□ -0.37
SF3B3-208ENST00000567250 IRF2BP2Q7Z5L9 587 aa12.75□□□□□ -0.37
SF3B3-208ENST00000567250 SCD5Q86SK9 330 aa12.75□□□□□ -0.37
SF3B3-208ENST00000567250 MFSD6LQ8IWD5 586 aa12.75□□□□□ -0.37
SF3B3-208ENST00000567250 WDTC1Q8N5D0 677 aa12.75□□□□□ -0.37
SF3B3-208ENST00000567250 USP13Q92995 863 aaPredicted RBP12.75□□□□□ -0.37
SF3B3-208ENST00000567250 C18orf8Q96DM3 657 aa12.75□□□□□ -0.37
SF3B3-208ENST00000567250 TRMT61BQ9BVS5 477 aaKnown RBP12.75□□□□□ -0.37
SF3B3-208ENST00000567250 HAUS4Q9H6D7 363 aa12.75□□□□□ -0.37
SF3B3-208ENST00000567250 POPDC2Q9HBU9 364 aa12.75□□□□□ -0.37
SF3B3-208ENST00000567250 WDR35Q9P2L0 1181 aa12.75□□□□□ -0.37
SF3B3-208ENST00000567250 MUTYHQ9UIF7 546 aa12.75□□□□□ -0.37
SF3B3-208ENST00000567250 RASAL2Q9UJF2 1139 aa12.75□□□□□ -0.37
SF3B3-208ENST00000567250 LSM7Q9UK45 103 aaKnown RBP12.75□□□□□ -0.37
SF3B3-208ENST00000567250 CPQQ9Y646 472 aa12.75□□□□□ -0.37
SF3B3-208ENST00000567250 A0A0C4DFX4 3053 aa12.75□□□□□ -0.37
SF3B3-208ENST00000567250 MYO10Q9HD67 2058 aa12.74□□□□□ -0.37
SF3B3-208ENST00000567250 AKR1B15C9JRZ8 316 aaPredicted RBP12.74□□□□□ -0.37
SF3B3-208ENST00000567250 DCXO43602 365 aa12.74□□□□□ -0.37
SF3B3-208ENST00000567250 MFAP3LO75121 409 aa12.74□□□□□ -0.37
SF3B3-208ENST00000567250 ERBB2P04626 1255 aa12.74□□□□□ -0.37
SF3B3-208ENST00000567250 UNGP13051 313 aaPredicted RBP12.74□□□□□ -0.37
SF3B3-208ENST00000567250 CHRNB2P17787 502 aa12.74□□□□□ -0.37
SF3B3-208ENST00000567250 HNRNPH3P31942 346 aaKnown RBP12.74□□□□□ -0.37
SF3B3-208ENST00000567250 VIPR2P41587 438 aa12.74□□□□□ -0.37
SF3B3-208ENST00000567250 GABRB2P47870 512 aa12.74□□□□□ -0.37
SF3B3-208ENST00000567250 NUBP1P53384 320 aa12.74□□□□□ -0.37
SF3B3-208ENST00000567250 ZNF77Q15935 545 aa12.74□□□□□ -0.37
SF3B3-208ENST00000567250 CLEC16AQ2KHT3 1053 aa12.74□□□□□ -0.37
SF3B3-208ENST00000567250 OR6B2Q6IFH4 312 aa12.74□□□□□ -0.37
SF3B3-208ENST00000567250 OLFML1Q6UWY5 402 aa12.74□□□□□ -0.37
SF3B3-208ENST00000567250 FAM183BPQ6ZVS7 135 aa12.74□□□□□ -0.37
SF3B3-208ENST00000567250 SLC26A9Q7LBE3 791 aa12.74□□□□□ -0.37
SF3B3-208ENST00000567250 BHLHA9Q7RTU4 235 aa12.74□□□□□ -0.37
SF3B3-208ENST00000567250 SCUBE3Q8IX30 993 aa12.74□□□□□ -0.37
SF3B3-208ENST00000567250 PIP4P2Q8N4L2 257 aa12.74□□□□□ -0.37
SF3B3-208ENST00000567250 SLC44A3Q8N4M1 653 aa12.74□□□□□ -0.37
SF3B3-208ENST00000567250 OR8K1Q8NGG5 319 aa12.74□□□□□ -0.37
SF3B3-208ENST00000567250 SH3RF2Q8TEC5 729 aa12.74□□□□□ -0.37
SF3B3-208ENST00000567250 CLEC4CQ8WTT0 213 aa12.74□□□□□ -0.37
SF3B3-208ENST00000567250 RSAD2Q8WXG1 361 aa12.74□□□□□ -0.37
SF3B3-208ENST00000567250 DNASE1L2Q92874 299 aa12.74□□□□□ -0.37
SF3B3-208ENST00000567250 IRF7Q92985 503 aa12.74□□□□□ -0.37
SF3B3-208ENST00000567250 SERPINB11Q96P15 392 aa12.74□□□□□ -0.37
SF3B3-208ENST00000567250 SLC22A12Q96S37 553 aa12.74□□□□□ -0.37
SF3B3-208ENST00000567250 CYP2S1Q96SQ9 504 aa12.74□□□□□ -0.37
SF3B3-208ENST00000567250 DNAJC7Q99615 494 aa12.74□□□□□ -0.37
SF3B3-208ENST00000567250 SMG9Q9H0W8 520 aaKnown RBP12.74□□□□□ -0.37
SF3B3-208ENST00000567250 BRD9Q9H8M2 597 aa12.74□□□□□ -0.37
SF3B3-208ENST00000567250 CD320Q9NPF0 282 aa12.74□□□□□ -0.37
SF3B3-208ENST00000567250 ABHD10Q9NUJ1 306 aa12.74□□□□□ -0.37
SF3B3-208ENST00000567250 OSER1Q9NX31 292 aa12.74□□□□□ -0.37
SF3B3-208ENST00000567250 CCL26Q9Y258 94 aa12.74□□□□□ -0.37
SF3B3-208ENST00000567250 SH3BP1Q9Y3L3 701 aa12.74□□□□□ -0.37
SF3B3-208ENST00000567250 VCANP13611 3396 aa12.74□□□□□ -0.37
SF3B3-208ENST00000567250 TNFRSF10AO00220 468 aa12.73□□□□□ -0.37
SF3B3-208ENST00000567250 LEFTY2O00292 366 aa12.73□□□□□ -0.37
SF3B3-208ENST00000567250 SLC9A3R1O14745 358 aaPredicted RBP12.73□□□□□ -0.37
SF3B3-208ENST00000567250 ZNF263O14978 683 aa12.73□□□□□ -0.37
SF3B3-208ENST00000567250 CHADO15335 359 aa12.73□□□□□ -0.37
SF3B3-208ENST00000567250 AP5Z1O43299 807 aa12.73□□□□□ -0.37
SF3B3-208ENST00000567250 DAB1O75553 588 aa12.73□□□□□ -0.37
SF3B3-208ENST00000567250 NCAM1P13591 858 aa12.73□□□□□ -0.37
SF3B3-208ENST00000567250 MMP8P22894 467 aa12.73□□□□□ -0.37
SF3B3-208ENST00000567250 CDC25BP30305 580 aa12.73□□□□□ -0.37
SF3B3-208ENST00000567250 GDI1P31150 447 aa12.73□□□□□ -0.37
SF3B3-208ENST00000567250 IFNAR2P48551 515 aa12.73□□□□□ -0.37
SF3B3-208ENST00000567250 KPNA1P52294 538 aaPredicted RBP12.73□□□□□ -0.37
SF3B3-208ENST00000567250 GSCP56915 257 aaPredicted RBP12.73□□□□□ -0.37
SF3B3-208ENST00000567250 YWHAZP63104 245 aaKnown RBP12.73□□□□□ -0.37
SF3B3-208ENST00000567250 COG7P83436 770 aa12.73□□□□□ -0.37
SF3B3-208ENST00000567250 SLC6A3Q01959 620 aa12.73□□□□□ -0.37
SF3B3-208ENST00000567250 EFEMP1Q12805 493 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms