RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 EPHA8P29322 1005 aaPredicted RBP3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 ATP5DP30049 168 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 HPDP32754 393 aaPredicted RBP3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 KIF5BP33176 963 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 ARL4AP40617 200 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 HNF4AP41235 474 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 KRTAP10-2P60368 255 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 DUSP2Q05923 314 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 EFEMP1Q12805 493 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 SF3A3Q12874 501 aaKnown RBP eCLIP3.62□□□□□ -1.832e-8■■□□□ 12.5
HERPUD1-211ENST00000566550 MYO1EQ12965 1108 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 SSPNQ14714 243 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 PKN2Q16513 984 aaKnown RBP3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 OLFML2BQ68BL8 750 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 FCRL6Q6DN72 434 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 ANO7Q6IWH7 933 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 MED25Q71SY5 747 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 RASGRP2Q7LDG7 609 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 CATSPER4Q7RTX7 472 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 SLFN11Q7Z7L1 901 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 GPR149Q86SP6 731 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 USP37Q86T82 979 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 PRPF39Q86UA1 669 aaKnown RBP3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 PROSER1Q86XN7 944 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 ERC1Q8IUD2 1116 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 EPHX4Q8IUS5 362 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 FAM126BQ8IXS8 530 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 THNSL1Q8IYQ7 743 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 WDTC1Q8N5D0 677 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 AOPEPQ8N6M6 819 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 STPG3Q8N7X2 389 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 FRMD1Q8N878 549 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 ANKS4BQ8N8V4 417 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 FAM71DQ8N9W8 422 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 Q8NFD4 153 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 NFKBIDQ8NI38 313 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 FEZF2Q8TBJ5 459 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 WDR60Q8WVS4 1066 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 NCSTNQ92542 709 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 VPS33AQ96AX1 596 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 ZSWIM3Q96MP5 696 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 APOL6Q9BWW8 343 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 SGPP1Q9BX95 441 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 TRIM5Q9C035 493 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 RANBP17Q9H2T7 1088 aaKnown RBP3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 NDST4Q9H3R1 872 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 MROH8Q9H579 483 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 C19orf44Q9H6X5 657 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 PLEKHA2Q9HB19 425 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 ZBTB26Q9HCK0 441 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 ERVK-5Q9HDB9 667 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 GCM1Q9NP62 436 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 FSCN3Q9NQT6 498 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 ING3Q9NXR8 418 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 MOCS1Q9NZB8 636 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 COQ3Q9NZJ6 369 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 TBC1D14Q9P2M4 693 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 GPR160Q9UJ42 338 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 ANAPC5Q9UJX4 755 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 GTF3C4Q9UKN8 822 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 CA14Q9ULX7 337 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 AGAP1Q9UPQ3 857 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 CNTN6Q9UQ52 1028 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 RIMBP3CA6NJZ7 1639 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 RIMBP3BA6NNM3 1639 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 RIMBP3Q9UFD9 1639 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 GPRASP1Q5JY77 1395 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 AQP7P3A6NL99 342 aa3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 EFCAB8A8MWE9 144 aa3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 TEX33O43247 280 aa3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 HNRNPRO43390 633 aaKnown RBP3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 ADAM20O43506 726 aa3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 DIAPH2O60879 1101 aa3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 SRGAP2O75044 1071 aa3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 HMMRO75330 724 aa3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 B3GALNT1O75752 331 aa3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 CCNDBP1O95273 360 aa3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 GGPS1O95749 300 aa3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 CER1O95813 267 aa3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 SLC4A1P02730 911 aa3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 TFRCP02786 760 aaKnown RBP3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 MT-ND3P03897 115 aa3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 ARP10275 920 aa3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 ALAS1P13196 640 aa3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 STMN1P16949 149 aa3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 ATP5JP18859 108 aa3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 CHRM3P20309 590 aa3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 FGFR4P22455 802 aa3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 ATP5F1P24539 256 aaPredicted RBP3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 PSMA3P25788 255 aa3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 SLC6A4P31645 630 aa3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 CRHR1P34998 444 aa3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 THPOP40225 353 aa3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 MCM2P49736 904 aa3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 KCNQ1P51787 676 aa3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 RAP2BP61225 183 aa3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 NKX3-2P78367 333 aa3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 AIMP1Q12904 312 aaKnown RBP3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 EPS8Q12929 822 aa3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 INSCQ1MX18 579 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms