RNA–Protein interactions for RNA: ENST00000566498.1

CCDC113-204, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-204ENST00000566498 RSRC2Q7L4I2 434 aaKnown RBP20.3■□□□□ 0.84
CCDC113-204ENST00000566498 MIB1Q86YT6 1006 aa20.3■□□□□ 0.84
CCDC113-204ENST00000566498 SIX6OS1Q8N1H7 587 aa20.3■□□□□ 0.84
CCDC113-204ENST00000566498 NDRG1Q92597 394 aaKnown RBP20.3■□□□□ 0.84
CCDC113-204ENST00000566498 OTUB2Q96DC9 234 aa20.3■□□□□ 0.84
CCDC113-204ENST00000566498 FAM81BQ96LP2 452 aa20.3■□□□□ 0.84
CCDC113-204ENST00000566498 CDK5RAP1Q96SZ6 601 aaKnown RBP20.3■□□□□ 0.84
CCDC113-204ENST00000566498 TUBGCP2Q9BSJ2 902 aa20.3■□□□□ 0.84
CCDC113-204ENST00000566498 ULBP1Q9BZM6 244 aa20.3■□□□□ 0.84
CCDC113-204ENST00000566498 CLIC5Q9NZA1 410 aa20.3■□□□□ 0.84
CCDC113-204ENST00000566498 M0QYV0 167 aa20.29■□□□□ 0.84
CCDC113-204ENST00000566498 ATG13O75143 517 aa20.29■□□□□ 0.84
CCDC113-204ENST00000566498 ADH1CP00326 375 aa20.29■□□□□ 0.84
CCDC113-204ENST00000566498 CYP17A1P05093 508 aa20.29■□□□□ 0.84
CCDC113-204ENST00000566498 PON1P27169 355 aa20.29■□□□□ 0.84
CCDC113-204ENST00000566498 NRLP54845 237 aa20.29■□□□□ 0.84
CCDC113-204ENST00000566498 YWHAGP61981 247 aaKnown RBP eCLIP20.29■□□□□ 0.84
CCDC113-204ENST00000566498 ADIGQ0VDE8 80 aa20.29■□□□□ 0.84
CCDC113-204ENST00000566498 VWA3BQ502W6 1294 aa20.29■□□□□ 0.84
CCDC113-204ENST00000566498 BBS7Q8IWZ6 715 aa20.29■□□□□ 0.84
CCDC113-204ENST00000566498 ZNF276Q8N554 614 aa20.29■□□□□ 0.84
CCDC113-204ENST00000566498 WBP2Q969T9 261 aa20.29■□□□□ 0.84
CCDC113-204ENST00000566498 NDST4Q9H3R1 872 aa20.29■□□□□ 0.84
CCDC113-204ENST00000566498 SEMA4AQ9H3S1 761 aa20.29■□□□□ 0.84
CCDC113-204ENST00000566498 PRMT8Q9NR22 394 aaPredicted RBP20.29■□□□□ 0.84
CCDC113-204ENST00000566498 SAMSN1Q9NSI8 373 aaKnown RBP20.29■□□□□ 0.84
CCDC113-204ENST00000566498 ZSCAN32Q9NX65 697 aa20.29■□□□□ 0.84
CCDC113-204ENST00000566498 APEX2Q9UBZ4 518 aa20.29■□□□□ 0.84
CCDC113-204ENST00000566498 LSM7Q9UK45 103 aaKnown RBP20.29■□□□□ 0.84
CCDC113-204ENST00000566498 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.29■□□□□ 0.84
CCDC113-204ENST00000566498 ATG2BQ96BY7 2078 aa20.28■□□□□ 0.84
CCDC113-204ENST00000566498 GTPBP10A4D1E9 387 aaKnown RBP20.28■□□□□ 0.84
CCDC113-204ENST00000566498 KCNJ18B7U540 433 aa20.28■□□□□ 0.84
CCDC113-204ENST00000566498 PIK3R2O00459 728 aa20.28■□□□□ 0.84
CCDC113-204ENST00000566498 MBD3O95983 291 aa20.28■□□□□ 0.84
CCDC113-204ENST00000566498 RGS7P49802 495 aa20.28■□□□□ 0.84
CCDC113-204ENST00000566498 APBA1Q02410 837 aa20.28■□□□□ 0.84
CCDC113-204ENST00000566498 EFEMP1Q12805 493 aa20.28■□□□□ 0.84
CCDC113-204ENST00000566498 KCNJ12Q14500 433 aa20.28■□□□□ 0.84
CCDC113-204ENST00000566498 ANO4Q32M45 955 aa20.28■□□□□ 0.84
CCDC113-204ENST00000566498 LY6G5CQ5SRR4 150 aa20.28■□□□□ 0.84
CCDC113-204ENST00000566498 BTBD8Q5XKL5 378 aa20.28■□□□□ 0.84
CCDC113-204ENST00000566498 PM20D1Q6GTS8 502 aa20.28■□□□□ 0.84
CCDC113-204ENST00000566498 HTR3DQ70Z44 454 aa20.28■□□□□ 0.84
CCDC113-204ENST00000566498 SLC35F5Q8WV83 523 aa20.28■□□□□ 0.84
CCDC113-204ENST00000566498 KCTD13Q8WZ19 329 aa20.28■□□□□ 0.84
CCDC113-204ENST00000566498 SECISBP2LQ93073 1101 aaKnown RBP20.28■□□□□ 0.84
CCDC113-204ENST00000566498 ZSWIM1Q9BR11 485 aa20.28■□□□□ 0.84
CCDC113-204ENST00000566498 RASAL2Q9UJF2 1139 aa20.28■□□□□ 0.84
CCDC113-204ENST00000566498 CNTN6Q9UQ52 1028 aa20.28■□□□□ 0.84
CCDC113-204ENST00000566498 MED7O43513 233 aa20.27■□□□□ 0.84
CCDC113-204ENST00000566498 RNF40O75150 1001 aa20.27■□□□□ 0.84
CCDC113-204ENST00000566498 LETM1O95202 739 aaPredicted RBP20.27■□□□□ 0.84
CCDC113-204ENST00000566498 HMBSP08397 361 aa20.27■□□□□ 0.84
CCDC113-204ENST00000566498 ADH5P11766 374 aa20.27■□□□□ 0.84
CCDC113-204ENST00000566498 OPRD1P41143 372 aa20.27■□□□□ 0.84
CCDC113-204ENST00000566498 SLC6A11P48066 632 aa20.27■□□□□ 0.84
CCDC113-204ENST00000566498 ZNF132P52740 706 aa20.27■□□□□ 0.84
CCDC113-204ENST00000566498 COG7P83436 770 aa20.27■□□□□ 0.84
CCDC113-204ENST00000566498 GAD2Q05329 585 aa20.27■□□□□ 0.84
CCDC113-204ENST00000566498 FBXO43Q4G163 708 aa20.27■□□□□ 0.84
CCDC113-204ENST00000566498 PKDCCQ504Y2 493 aa20.27■□□□□ 0.84
CCDC113-204ENST00000566498 PMF1Q6P1K2 205 aa20.27■□□□□ 0.84
CCDC113-204ENST00000566498 ASCL5Q7RTU5 278 aa20.27■□□□□ 0.84
CCDC113-204ENST00000566498 NAT16Q8N8M0 369 aa20.27■□□□□ 0.84
CCDC113-204ENST00000566498 ENOX1Q8TC92 643 aaKnown RBP20.27■□□□□ 0.84
CCDC113-204ENST00000566498 PNKPQ96T60 521 aa20.27■□□□□ 0.84
CCDC113-204ENST00000566498 FAM126AQ9BYI3 521 aaPredicted RBP20.27■□□□□ 0.84
CCDC113-204ENST00000566498 SPHK2Q9NRA0 654 aa20.27■□□□□ 0.84
CCDC113-204ENST00000566498 STRIP2Q9ULQ0 834 aa20.27■□□□□ 0.84
CCDC113-204ENST00000566498 NFE2L3Q9Y4A8 694 aa20.27■□□□□ 0.84
CCDC113-204ENST00000566498 PCDHGA2Q9Y5H1 932 aa20.27■□□□□ 0.84
CCDC113-204ENST00000566498 MYOFQ9NZM1 2061 aa20.26■□□□□ 0.83
CCDC113-204ENST00000566498 TCP11X2Q5H9J9 407 aa20.26■□□□□ 0.83
CCDC113-204ENST00000566498 RBM43Q6ZSC3 357 aaKnown RBP20.26■□□□□ 0.83
CCDC113-204ENST00000566498 TMEM25Q86YD3 366 aa20.26■□□□□ 0.83
CCDC113-204ENST00000566498 RNF139Q8WU17 664 aa20.26■□□□□ 0.83
CCDC113-204ENST00000566498 CNGB3Q9NQW8 809 aa20.26■□□□□ 0.83
CCDC113-204ENST00000566498 ST7Q9NRC1 585 aa20.26■□□□□ 0.83
CCDC113-204ENST00000566498 ANO10Q9NW15 660 aa20.26■□□□□ 0.83
CCDC113-204ENST00000566498 MARCH2Q9P0N8 246 aa20.26■□□□□ 0.83
CCDC113-204ENST00000566498 PRR23AA6NEV1 266 aa20.25■□□□□ 0.83
CCDC113-204ENST00000566498 THAP12O43422 761 aa20.25■□□□□ 0.83
CCDC113-204ENST00000566498 LMNAP02545 664 aaKnown RBP20.25■□□□□ 0.83
CCDC113-204ENST00000566498 GNA15P30679 374 aa20.25■□□□□ 0.83
CCDC113-204ENST00000566498 GAB4Q2WGN9 574 aa20.25■□□□□ 0.83
CCDC113-204ENST00000566498 CCDC183Q5T5S1 534 aa20.25■□□□□ 0.83
CCDC113-204ENST00000566498 BSPRYQ5W0U4 402 aa20.25■□□□□ 0.83
CCDC113-204ENST00000566498 HEATR6Q6AI08 1181 aaKnown RBP20.25■□□□□ 0.83
CCDC113-204ENST00000566498 TPGS1Q6ZTW0 290 aa20.25■□□□□ 0.83
CCDC113-204ENST00000566498 CCDC26Q8TAB7 109 aa20.25■□□□□ 0.83
CCDC113-204ENST00000566498 ZNF606Q8WXB4 792 aa20.25■□□□□ 0.83
CCDC113-204ENST00000566498 EDEM1Q92611 657 aa20.25■□□□□ 0.83
CCDC113-204ENST00000566498 HSFY1Q96LI6 401 aa20.25■□□□□ 0.83
CCDC113-204ENST00000566498 MIS12Q9H081 205 aa20.25■□□□□ 0.83
CCDC113-204ENST00000566498 C2orf42Q9NWW7 574 aa20.25■□□□□ 0.83
CCDC113-204ENST00000566498 DNAJC12Q9UKB3 198 aa20.25■□□□□ 0.83
CCDC113-204ENST00000566498 SLC8A2Q9UPR5 921 aa20.25■□□□□ 0.83
CCDC113-204ENST00000566498 ZFHX2Q9C0A1 2572 aaPredicted RBP20.25■□□□□ 0.83
CCDC113-204ENST00000566498 SLC12A8A0AV02 714 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms