RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 ARHGAP39Q9C0H5 1083 aa2.86□□□□□ -1.95
SMG1-212ENST00000566328 ARL8BQ9NVJ2 186 aa2.86□□□□□ -1.95
SMG1-212ENST00000566328 CDY1Q9Y6F8 540 aa2.86□□□□□ -1.95
SMG1-212ENST00000566328 FER1L4A9Z1Z3 1794 aa2.86□□□□□ -1.95
SMG1-212ENST00000566328 A0A088AWK7 358 aa2.85□□□□□ -1.95
SMG1-212ENST00000566328 LOC105378220A0A1B0GUY1 285 aaPredicted RBP2.85□□□□□ -1.95
SMG1-212ENST00000566328 C2CD4BA6NLJ0 364 aa2.85□□□□□ -1.95
SMG1-212ENST00000566328 A8MVJ9 347 aa2.85□□□□□ -1.95
SMG1-212ENST00000566328 F8W810 466 aa2.85□□□□□ -1.95
SMG1-212ENST00000566328 EXOC5O00471 708 aa2.85□□□□□ -1.95
SMG1-212ENST00000566328 BTN3A1O00481 513 aa2.85□□□□□ -1.95
SMG1-212ENST00000566328 AP1G1O43747 822 aa2.85□□□□□ -1.95
SMG1-212ENST00000566328 SRGAP2O75044 1071 aa2.85□□□□□ -1.95
SMG1-212ENST00000566328 NDUFB8O95169 186 aa2.85□□□□□ -1.95
SMG1-212ENST00000566328 RASAL1O95294 804 aa2.85□□□□□ -1.95
SMG1-212ENST00000566328 PLAUP00749 431 aa2.85□□□□□ -1.95
SMG1-212ENST00000566328 ALDH2P05091 517 aa2.85□□□□□ -1.95
SMG1-212ENST00000566328 FGF2P09038 288 aa2.85□□□□□ -1.95
SMG1-212ENST00000566328 FGF3P11487 239 aaPredicted RBP2.85□□□□□ -1.95
SMG1-212ENST00000566328 ARFIP2P53365 341 aa2.85□□□□□ -1.95
SMG1-212ENST00000566328 TIAL1Q01085 375 aaKnown RBP eCLIP2.85□□□□□ -1.95
SMG1-212ENST00000566328 SLC13A2Q13183 592 aa2.85□□□□□ -1.95
SMG1-212ENST00000566328 INPP5JQ15735 1006 aaPredicted RBP2.85□□□□□ -1.95
SMG1-212ENST00000566328 ST3GAL2Q16842 350 aa2.85□□□□□ -1.95
SMG1-212ENST00000566328 ZNF324BQ6AW86 544 aaPredicted RBP2.85□□□□□ -1.95
SMG1-212ENST00000566328 TRAPPC11Q7Z392 1133 aa2.85□□□□□ -1.95
SMG1-212ENST00000566328 COL23A1Q86Y22 540 aaPredicted RBP2.85□□□□□ -1.95
SMG1-212ENST00000566328 RFX6Q8HWS3 928 aa2.85□□□□□ -1.95
SMG1-212ENST00000566328 FBXL14Q8N1E6 418 aa2.85□□□□□ -1.95
SMG1-212ENST00000566328 SLC44A5Q8NCS7 719 aa2.85□□□□□ -1.95
SMG1-212ENST00000566328 EDC3Q96F86 508 aaKnown RBP2.85□□□□□ -1.95
SMG1-212ENST00000566328 NUP88Q99567 741 aaPredicted RBP2.85□□□□□ -1.95
SMG1-212ENST00000566328 CGRRF1Q99675 332 aa2.85□□□□□ -1.95
SMG1-212ENST00000566328 TRIM54Q9BYV2 358 aa2.85□□□□□ -1.95
SMG1-212ENST00000566328 NUAK2Q9H093 628 aa2.85□□□□□ -1.95
SMG1-212ENST00000566328 USP29Q9HBJ7 922 aa2.85□□□□□ -1.95
SMG1-212ENST00000566328 GJB4Q9NTQ9 266 aa2.85□□□□□ -1.95
SMG1-212ENST00000566328 TCF20Q9UGU0 1960 aaKnown RBP2.84□□□□□ -1.95
SMG1-212ENST00000566328 A0A1W2PPL8 197 aa2.84□□□□□ -1.95
SMG1-212ENST00000566328 FYB1O15117 783 aa2.84□□□□□ -1.95
SMG1-212ENST00000566328 CD3EAPO15446 510 aaKnown RBP2.84□□□□□ -1.95
SMG1-212ENST00000566328 PRPF4O43172 522 aaKnown RBP eCLIP2.84□□□□□ -1.95
SMG1-212ENST00000566328 PHGDHO43175 533 aaKnown RBP2.84□□□□□ -1.95
SMG1-212ENST00000566328 CCP110O43303 1012 aa2.84□□□□□ -1.95
SMG1-212ENST00000566328 TLX3O43711 291 aaPredicted RBP2.84□□□□□ -1.95
SMG1-212ENST00000566328 MARCH6O60337 910 aa2.84□□□□□ -1.95
SMG1-212ENST00000566328 EPN2O95208 641 aa2.84□□□□□ -1.95
SMG1-212ENST00000566328 IGKV3-20P01619 116 aa2.84□□□□□ -1.95
SMG1-212ENST00000566328 TNFRSF8P28908 595 aa2.84□□□□□ -1.95
SMG1-212ENST00000566328 GATMP50440 423 aa2.84□□□□□ -1.95
SMG1-212ENST00000566328 RAB1AP62820 205 aa2.84□□□□□ -1.95
SMG1-212ENST00000566328 TXNL4AP83876 142 aaKnown RBP2.84□□□□□ -1.95
SMG1-212ENST00000566328 FAM50AQ14320 339 aaKnown RBP2.84□□□□□ -1.95
SMG1-212ENST00000566328 NFATC4Q14934 902 aa2.84□□□□□ -1.95
SMG1-212ENST00000566328 KPNB1Q14974 876 aaKnown RBP2.84□□□□□ -1.95
SMG1-212ENST00000566328 RNF187Q5TA31 235 aaPredicted RBP2.84□□□□□ -1.95
SMG1-212ENST00000566328 CACHD1Q5VU97 1274 aa2.84□□□□□ -1.95
SMG1-212ENST00000566328 EGFLAMQ63HQ2 1017 aa2.84□□□□□ -1.95
SMG1-212ENST00000566328 SPATA2LQ8IUW3 424 aaPredicted RBP2.84□□□□□ -1.95
SMG1-212ENST00000566328 TMEM199Q8N511 208 aa2.84□□□□□ -1.95
SMG1-212ENST00000566328 PLBD2Q8NHP8 589 aa2.84□□□□□ -1.95
SMG1-212ENST00000566328 WIPF2Q8TF74 440 aaPredicted RBP2.84□□□□□ -1.95
SMG1-212ENST00000566328 ASB5Q8WWX0 329 aa2.84□□□□□ -1.95
SMG1-212ENST00000566328 HPS3Q969F9 1004 aa2.84□□□□□ -1.95
SMG1-212ENST00000566328 TRMT61AQ96FX7 289 aaKnown RBP2.84□□□□□ -1.95
SMG1-212ENST00000566328 WBP1Q96G27 269 aa2.84□□□□□ -1.95
SMG1-212ENST00000566328 MED30Q96HR3 178 aa2.84□□□□□ -1.95
SMG1-212ENST00000566328 CINPQ9BW66 212 aaPredicted RBP2.84□□□□□ -1.95
SMG1-212ENST00000566328 SCNM1Q9BWG6 230 aa2.84□□□□□ -1.95
SMG1-212ENST00000566328 ZNF518BQ9C0D4 1074 aa2.84□□□□□ -1.95
SMG1-212ENST00000566328 ZCWPW1Q9H0M4 648 aa2.84□□□□□ -1.95
SMG1-212ENST00000566328 RBM38Q9H0Z9 239 aaKnown RBP2.84□□□□□ -1.95
SMG1-212ENST00000566328 FZD3Q9NPG1 666 aa2.84□□□□□ -1.95
SMG1-212ENST00000566328 A1CFQ9NQ94 594 aaKnown RBP2.84□□□□□ -1.95
SMG1-212ENST00000566328 FZD4Q9ULV1 537 aa2.84□□□□□ -1.95
SMG1-212ENST00000566328 PCDHA12Q9UN75 941 aa2.84□□□□□ -1.95
SMG1-212ENST00000566328 SPATA31A1Q5TZJ5 1347 aa2.84□□□□□ -1.96
SMG1-212ENST00000566328 TMEM272A0A1B0GTI8 110 aa2.83□□□□□ -1.96
SMG1-212ENST00000566328 LOC102723971A0A1B0GUV8 181 aa2.83□□□□□ -1.96
SMG1-212ENST00000566328 IFITM10A6NMD0 228 aa2.83□□□□□ -1.96
SMG1-212ENST00000566328 ZNF814B7Z6K7 855 aa2.83□□□□□ -1.96
SMG1-212ENST00000566328 GAS8-AS1O95177 125 aa2.83□□□□□ -1.96
SMG1-212ENST00000566328 ADRA1DP25100 572 aa2.83□□□□□ -1.96
SMG1-212ENST00000566328 POLD2P49005 469 aa2.83□□□□□ -1.96
SMG1-212ENST00000566328 CDKN1CP49918 316 aaPredicted RBP2.83□□□□□ -1.96
SMG1-212ENST00000566328 ENTPD1P49961 510 aa2.83□□□□□ -1.96
SMG1-212ENST00000566328 PGDP52209 483 aa2.83□□□□□ -1.96
SMG1-212ENST00000566328 JAK3P52333 1124 aa2.83□□□□□ -1.96
SMG1-212ENST00000566328 GAS1P54826 345 aa2.83□□□□□ -1.96
SMG1-212ENST00000566328 GPC5P78333 572 aa2.83□□□□□ -1.96
SMG1-212ENST00000566328 PPATQ06203 517 aa2.83□□□□□ -1.96
SMG1-212ENST00000566328 KEAP1Q14145 624 aa2.83□□□□□ -1.96
SMG1-212ENST00000566328 PTGR1Q14914 329 aa2.83□□□□□ -1.96
SMG1-212ENST00000566328 ATAT1Q5SQI0 421 aa2.83□□□□□ -1.96
SMG1-212ENST00000566328 DAAM2Q86T65 1068 aa2.83□□□□□ -1.96
SMG1-212ENST00000566328 CUZD1Q86UP6 607 aa2.83□□□□□ -1.96
SMG1-212ENST00000566328 DENND1CQ8IV53 801 aa2.83□□□□□ -1.96
SMG1-212ENST00000566328 GRAMD1CQ8IYS0 662 aa2.83□□□□□ -1.96
SMG1-212ENST00000566328 SMCR8Q8TEV9 937 aaPredicted RBP2.83□□□□□ -1.96
SMG1-212ENST00000566328 NUDCD2Q8WVJ2 157 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms