RNA–Protein interactions for RNA: ENST00000566296.1

TSR3-202, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

TSL 3

Gene TSR3, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-202ENST00000566296 MAPK8P45983 427 aa17.46■□□□□ 0.39
TSR3-202ENST00000566296 NDST1P52848 882 aa17.46■□□□□ 0.39
TSR3-202ENST00000566296 MAP3K7CLP57077 242 aa17.46■□□□□ 0.39
TSR3-202ENST00000566296 CLDN10P78369 228 aa17.46■□□□□ 0.39
TSR3-202ENST00000566296 KRT85P78386 507 aa17.46■□□□□ 0.39
TSR3-202ENST00000566296 DNM1Q05193 864 aaKnown RBP17.46■□□□□ 0.39
TSR3-202ENST00000566296 ORC1Q13415 861 aa17.46■□□□□ 0.39
TSR3-202ENST00000566296 SGSM1Q2NKQ1 1148 aa17.46■□□□□ 0.39
TSR3-202ENST00000566296 SLC36A4Q6YBV0 504 aa17.46■□□□□ 0.39
TSR3-202ENST00000566296 UNC93AQ86WB7 457 aa17.46■□□□□ 0.39
TSR3-202ENST00000566296 SLC9A9Q8IVB4 645 aa17.46■□□□□ 0.39
TSR3-202ENST00000566296 GRAMD1CQ8IYS0 662 aa17.46■□□□□ 0.39
TSR3-202ENST00000566296 KIAA0895Q8NCT3 520 aa17.46■□□□□ 0.39
TSR3-202ENST00000566296 ZMIZ2Q8NF64 920 aa17.46■□□□□ 0.39
TSR3-202ENST00000566296 ELMO3Q96BJ8 720 aa17.46■□□□□ 0.39
TSR3-202ENST00000566296 XPO6Q96QU8 1125 aaKnown RBP17.46■□□□□ 0.39
TSR3-202ENST00000566296 SMOQ99835 787 aa17.46■□□□□ 0.39
TSR3-202ENST00000566296 SLC32A1Q9H598 525 aa17.46■□□□□ 0.39
TSR3-202ENST00000566296 FAM49BQ9NUQ9 324 aa17.46■□□□□ 0.39
TSR3-202ENST00000566296 DNAJC17Q9NVM6 304 aaKnown RBP17.46■□□□□ 0.39
TSR3-202ENST00000566296 MBD1Q9UIS9 605 aaPredicted RBP17.46■□□□□ 0.39
TSR3-202ENST00000566296 CEP192Q8TEP8 1941 aa17.46■□□□□ 0.39
TSR3-202ENST00000566296 CACNA1EQ15878 2313 aa17.46■□□□□ 0.38
TSR3-202ENST00000566296 NR3C1P04150 777 aa17.45■□□□□ 0.38
TSR3-202ENST00000566296 PROS1P07225 676 aa17.45■□□□□ 0.38
TSR3-202ENST00000566296 ADORA2BP29275 332 aa17.45■□□□□ 0.38
TSR3-202ENST00000566296 ATXN3P54252 364 aaPredicted RBP17.45■□□□□ 0.38
TSR3-202ENST00000566296 RPL6Q02878 288 aaKnown RBP17.45■□□□□ 0.38
TSR3-202ENST00000566296 ZACNQ401N2 412 aa17.45■□□□□ 0.38
TSR3-202ENST00000566296 SDE2Q6IQ49 451 aa17.45■□□□□ 0.38
TSR3-202ENST00000566296 UNQ6494/PRO21346Q6UXR6 183 aa17.45■□□□□ 0.38
TSR3-202ENST00000566296 TMEM25Q86YD3 366 aa17.45■□□□□ 0.38
TSR3-202ENST00000566296 DEFB124Q8NES8 71 aa17.45■□□□□ 0.38
TSR3-202ENST00000566296 IMPG2Q9BZV3 1241 aa17.45■□□□□ 0.38
TSR3-202ENST00000566296 DMAC2Q9NW81 257 aa17.45■□□□□ 0.38
TSR3-202ENST00000566296 CALCOCO1Q9P1Z2 691 aa17.45■□□□□ 0.38
TSR3-202ENST00000566296 HMGXB4Q9UGU5 601 aa17.45■□□□□ 0.38
TSR3-202ENST00000566296 SERTAD1Q9UHV2 236 aa17.45■□□□□ 0.38
TSR3-202ENST00000566296 FRMD4BQ9Y2L6 1034 aa17.45■□□□□ 0.38
TSR3-202ENST00000566296 FAM208BQ5VWN6 2430 aa17.45■□□□□ 0.38
TSR3-202ENST00000566296 NEDD8-MDP1E9PL57 170 aa17.44■□□□□ 0.38
TSR3-202ENST00000566296 KLRC4O43908 158 aa17.44■□□□□ 0.38
TSR3-202ENST00000566296 CFIP05156 583 aa17.44■□□□□ 0.38
TSR3-202ENST00000566296 SLFN14P0C7P3 912 aa17.44■□□□□ 0.38
TSR3-202ENST00000566296 ENGP17813 658 aa17.44■□□□□ 0.38
TSR3-202ENST00000566296 NTSR1P30989 418 aa17.44■□□□□ 0.38
TSR3-202ENST00000566296 ATP5C1P36542 298 aaKnown RBP17.44■□□□□ 0.38
TSR3-202ENST00000566296 STK4Q13043 487 aa17.44■□□□□ 0.38
TSR3-202ENST00000566296 CEP135Q66GS9 1140 aa17.44■□□□□ 0.38
TSR3-202ENST00000566296 SLC23A3Q6PIS1 610 aa17.44■□□□□ 0.38
TSR3-202ENST00000566296 RABEPKQ7Z6M1 372 aa17.44■□□□□ 0.38
TSR3-202ENST00000566296 CHPFQ8IZ52 775 aa17.44■□□□□ 0.38
TSR3-202ENST00000566296 CRYBG2Q8N1P7 616 aa17.44■□□□□ 0.38
TSR3-202ENST00000566296 FRMD1Q8N878 549 aa17.44■□□□□ 0.38
TSR3-202ENST00000566296 TMC2Q8TDI7 906 aa17.44■□□□□ 0.38
TSR3-202ENST00000566296 WBP2Q969T9 261 aa17.44■□□□□ 0.38
TSR3-202ENST00000566296 JAKMIP2Q96AA8 810 aa17.44■□□□□ 0.38
TSR3-202ENST00000566296 BBS2Q9BXC9 721 aa17.44■□□□□ 0.38
TSR3-202ENST00000566296 ADAM33Q9BZ11 813 aa17.44■□□□□ 0.38
TSR3-202ENST00000566296 DNAI2Q9GZS0 605 aa17.44■□□□□ 0.38
TSR3-202ENST00000566296 CSNK1G1Q9HCP0 422 aa17.44■□□□□ 0.38
TSR3-202ENST00000566296 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.44■□□□□ 0.381e-8■■■■■ 101
TSR3-202ENST00000566296 IGF2RP11717 2491 aa17.43■□□□□ 0.38
TSR3-202ENST00000566296 PCNX2A6NKB5 2137 aa17.43■□□□□ 0.38
TSR3-202ENST00000566296 PDXKO00764 312 aa17.43■□□□□ 0.38
TSR3-202ENST00000566296 CACNG3O60359 315 aa17.43■□□□□ 0.38
TSR3-202ENST00000566296 BEST1O76090 585 aa17.43■□□□□ 0.38
TSR3-202ENST00000566296 ASS1P00966 412 aaKnown RBP17.43■□□□□ 0.38
TSR3-202ENST00000566296 HLA-DRAP01903 254 aa17.43■□□□□ 0.38
TSR3-202ENST00000566296 GABRG2P18507 467 aa17.43■□□□□ 0.38
TSR3-202ENST00000566296 ITPKAP23677 461 aa17.43■□□□□ 0.38
TSR3-202ENST00000566296 WASP42768 502 aa17.43■□□□□ 0.38
TSR3-202ENST00000566296 ASPAP45381 313 aa17.43■□□□□ 0.38
TSR3-202ENST00000566296 DLG4P78352 724 aa17.43■□□□□ 0.38
TSR3-202ENST00000566296 DUOXA1Q1HG43 343 aa17.43■□□□□ 0.38
TSR3-202ENST00000566296 KMT5BQ4FZB7 885 aa17.43■□□□□ 0.38
TSR3-202ENST00000566296 PEAR1Q5VY43 1037 aaPredicted RBP17.43■□□□□ 0.38
TSR3-202ENST00000566296 EGFLAMQ63HQ2 1017 aa17.43■□□□□ 0.38
TSR3-202ENST00000566296 SPOPLQ6IQ16 392 aa17.43■□□□□ 0.38
TSR3-202ENST00000566296 TPGS1Q6ZTW0 290 aa17.43■□□□□ 0.38
TSR3-202ENST00000566296 HTR3DQ70Z44 454 aa17.43■□□□□ 0.38
TSR3-202ENST00000566296 SV2AQ7L0J3 742 aa17.43■□□□□ 0.38
TSR3-202ENST00000566296 HDDC3Q8N4P3 179 aa17.43■□□□□ 0.38
TSR3-202ENST00000566296 CEP76Q8TAP6 659 aa17.43■□□□□ 0.38
TSR3-202ENST00000566296 TMEM174Q8WUU8 243 aa17.43■□□□□ 0.38
TSR3-202ENST00000566296 PAGE5Q96GU1 130 aa17.43■□□□□ 0.38
TSR3-202ENST00000566296 KLF16Q9BXK1 252 aaPredicted RBP17.43■□□□□ 0.38
TSR3-202ENST00000566296 SCAND2PQ9GZW5 306 aaPredicted RBP17.43■□□□□ 0.38
TSR3-202ENST00000566296 KCTD10Q9H3F6 313 aa17.43■□□□□ 0.38
TSR3-202ENST00000566296 CYLDQ9NQC7 956 aa17.43■□□□□ 0.38
TSR3-202ENST00000566296 TMEM74BQ9NUR3 256 aa17.43■□□□□ 0.38
TSR3-202ENST00000566296 MARK1Q9P0L2 795 aa17.43■□□□□ 0.38
TSR3-202ENST00000566296 WDR35Q9P2L0 1181 aa17.43■□□□□ 0.38
TSR3-202ENST00000566296 PILRBQ9UKJ0 227 aa17.43■□□□□ 0.38
TSR3-202ENST00000566296 SCML2Q9UQR0 700 aa17.43■□□□□ 0.38
TSR3-202ENST00000566296 STARD13Q9Y3M8 1113 aa17.43■□□□□ 0.38
TSR3-202ENST00000566296 PCDHA5Q9Y5H7 936 aa17.43■□□□□ 0.38
TSR3-202ENST00000566296 C1QTNF9BB2RNN3 333 aa17.42■□□□□ 0.38
TSR3-202ENST00000566296 IKBKBO14920 756 aa17.42■□□□□ 0.38
TSR3-202ENST00000566296 CYP26A1O43174 497 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms