RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 HSF2BPO75031 334 aa17.55■□□□□ 0.4
RAB40C-210ENST00000566290 ODC1P11926 461 aa17.55■□□□□ 0.4
RAB40C-210ENST00000566290 TYMPP19971 482 aa17.55■□□□□ 0.4
RAB40C-210ENST00000566290 PCSK1P29120 753 aa17.55■□□□□ 0.4
RAB40C-210ENST00000566290 OAS2P29728 719 aaKnown RBP17.55■□□□□ 0.4
RAB40C-210ENST00000566290 HLTFQ14527 1009 aaKnown RBP eCLIP17.55■□□□□ 0.4
RAB40C-210ENST00000566290 BOLA3Q53S33 107 aa17.55■□□□□ 0.4
RAB40C-210ENST00000566290 EP400NLQ6ZTU2 488 aa17.55■□□□□ 0.4
RAB40C-210ENST00000566290 TMC3Q7Z5M5 1100 aa17.55■□□□□ 0.4
RAB40C-210ENST00000566290 PHLDB2Q86SQ0 1253 aa17.55■□□□□ 0.4
RAB40C-210ENST00000566290 OSTM1Q86WC4 334 aa17.55■□□□□ 0.4
RAB40C-210ENST00000566290 PSTKQ8IV42 348 aaKnown RBP17.55■□□□□ 0.4
RAB40C-210ENST00000566290 CCDC50Q8IVM0 306 aa17.55■□□□□ 0.4
RAB40C-210ENST00000566290 UBA3Q8TBC4 463 aa17.55■□□□□ 0.4
RAB40C-210ENST00000566290 FMO2Q99518 471 aa17.55■□□□□ 0.4
RAB40C-210ENST00000566290 HERPUD2Q9BSE4 406 aa17.55■□□□□ 0.4
RAB40C-210ENST00000566290 TRIM51Q9BSJ1 452 aa17.55■□□□□ 0.4
RAB40C-210ENST00000566290 DUSP16Q9BY84 665 aa17.55■□□□□ 0.4
RAB40C-210ENST00000566290 DPEP3Q9H4B8 488 aa17.55■□□□□ 0.4
RAB40C-210ENST00000566290 ELAC1Q9H777 363 aaKnown RBP17.55■□□□□ 0.4
RAB40C-210ENST00000566290 GOLGA2P5Q9HBQ8 144 aa17.55■□□□□ 0.4
RAB40C-210ENST00000566290 FAM86C1Q9NVL1 165 aa17.55■□□□□ 0.4
RAB40C-210ENST00000566290 MTRF1LQ9UGC7 380 aaKnown RBP17.55■□□□□ 0.4
RAB40C-210ENST00000566290 LRFN2Q9ULH4 789 aa17.55■□□□□ 0.4
RAB40C-210ENST00000566290 USTQ9Y2C2 406 aa17.55■□□□□ 0.4
RAB40C-210ENST00000566290 C5orf42Q9H799 3197 aa17.55■□□□□ 0.4
RAB40C-210ENST00000566290 KIAA1671Q9BY89 1806 aa17.54■□□□□ 0.4
RAB40C-210ENST00000566290 AGPSO00116 658 aa17.54■□□□□ 0.4
RAB40C-210ENST00000566290 FBXO21O94952 628 aa17.54■□□□□ 0.4
RAB40C-210ENST00000566290 TRUB2O95900 331 aaKnown RBP17.54■□□□□ 0.4
RAB40C-210ENST00000566290 NPR3P17342 541 aa17.54■□□□□ 0.4
RAB40C-210ENST00000566290 PTPN1P18031 435 aaKnown RBP17.54■□□□□ 0.4
RAB40C-210ENST00000566290 ITIH2P19823 946 aa17.54■□□□□ 0.4
RAB40C-210ENST00000566290 SCNN1GP51170 649 aa17.54■□□□□ 0.4
RAB40C-210ENST00000566290 ARSEP51690 589 aa17.54■□□□□ 0.4
RAB40C-210ENST00000566290 PDK2Q15119 407 aa17.54■□□□□ 0.4
RAB40C-210ENST00000566290 EFHC1Q5JVL4 640 aa17.54■□□□□ 0.4
RAB40C-210ENST00000566290 OR6B2Q6IFH4 312 aa17.54■□□□□ 0.4
RAB40C-210ENST00000566290 ZDHHC24Q6UX98 284 aa17.54■□□□□ 0.4
RAB40C-210ENST00000566290 MFSD7Q6UXD7 560 aa17.54■□□□□ 0.4
RAB40C-210ENST00000566290 CEP128Q6ZU80 1094 aa17.54■□□□□ 0.4
RAB40C-210ENST00000566290 CMTR2Q8IYT2 770 aaKnown RBP17.54■□□□□ 0.4
RAB40C-210ENST00000566290 FUKQ8N0W3 1084 aa17.54■□□□□ 0.4
RAB40C-210ENST00000566290 CCDC89Q8N998 374 aa17.54■□□□□ 0.4
RAB40C-210ENST00000566290 CLP1Q92989 425 aaKnown RBP17.54■□□□□ 0.4
RAB40C-210ENST00000566290 ART4Q93070 314 aa17.54■□□□□ 0.4
RAB40C-210ENST00000566290 MRPL38Q96DV4 380 aaKnown RBP17.54■□□□□ 0.4
RAB40C-210ENST00000566290 PHACTR1Q9C0D0 580 aa17.54■□□□□ 0.4
RAB40C-210ENST00000566290 PNPLA8Q9NP80 782 aa17.54■□□□□ 0.4
RAB40C-210ENST00000566290 ST7Q9NRC1 585 aa17.54■□□□□ 0.4
RAB40C-210ENST00000566290 FAM49BQ9NUQ9 324 aa17.54■□□□□ 0.4
RAB40C-210ENST00000566290 TMEM161AQ9NX61 479 aa17.54■□□□□ 0.4
RAB40C-210ENST00000566290 USP18Q9UMW8 372 aa17.54■□□□□ 0.4
RAB40C-210ENST00000566290 FNDC1Q4ZHG4 1894 aaPredicted RBP17.54■□□□□ 0.4
RAB40C-210ENST00000566290 FAM170AA1A519 330 aa17.53■□□□□ 0.4
RAB40C-210ENST00000566290 TBKBP1A7MCY6 615 aa17.53■□□□□ 0.4
RAB40C-210ENST00000566290 MEIS3P2A8K0S8 358 aa17.53■□□□□ 0.4
RAB40C-210ENST00000566290 GOLGA8KD6RF30 607 aa17.53■□□□□ 0.4
RAB40C-210ENST00000566290 H3BNC9 293 aa17.53■□□□□ 0.4
RAB40C-210ENST00000566290 H3BQF6 201 aa17.53■□□□□ 0.4
RAB40C-210ENST00000566290 LIASO43766 372 aa17.53■□□□□ 0.4
RAB40C-210ENST00000566290 GABBR2O75899 941 aa17.53■□□□□ 0.4
RAB40C-210ENST00000566290 ITGAVP06756 1048 aa17.53■□□□□ 0.4
RAB40C-210ENST00000566290 FAM153BP0C7A2 387 aa17.53■□□□□ 0.4
RAB40C-210ENST00000566290 PDGFRAP16234 1089 aa17.53■□□□□ 0.4
RAB40C-210ENST00000566290 KDELR1P24390 212 aa17.53■□□□□ 0.4
RAB40C-210ENST00000566290 LMO2P25791 158 aa17.53■□□□□ 0.4
RAB40C-210ENST00000566290 MIPP30301 263 aa17.53■□□□□ 0.4
RAB40C-210ENST00000566290 SDC4P31431 198 aa17.53■□□□□ 0.4
RAB40C-210ENST00000566290 CTNNB1P35222 781 aa17.53■□□□□ 0.4
RAB40C-210ENST00000566290 BMPR1AP36894 532 aa17.53■□□□□ 0.4
RAB40C-210ENST00000566290 MRPS25P82663 173 aaKnown RBP17.53■□□□□ 0.4
RAB40C-210ENST00000566290 DSC1Q08554 894 aa17.53■□□□□ 0.4
RAB40C-210ENST00000566290 GPM6BQ13491 265 aa17.53■□□□□ 0.4
RAB40C-210ENST00000566290 SLMAPQ14BN4 828 aa17.53■□□□□ 0.4
RAB40C-210ENST00000566290 OASLQ15646 514 aaKnown RBP17.53■□□□□ 0.4
RAB40C-210ENST00000566290 FAM153CQ494X1 144 aa17.53■□□□□ 0.4
RAB40C-210ENST00000566290 ODF2Q5BJF6 829 aa17.53■□□□□ 0.4
RAB40C-210ENST00000566290 TCEAL5Q5H9L2 206 aa17.53■□□□□ 0.4
RAB40C-210ENST00000566290 CLLU1OSQ5K130 101 aa17.53■□□□□ 0.4
RAB40C-210ENST00000566290 CYP4V2Q6ZWL3 525 aaPredicted RBP17.53■□□□□ 0.4
RAB40C-210ENST00000566290 STRADAQ7RTN6 431 aa17.53■□□□□ 0.4
RAB40C-210ENST00000566290 BNIPLQ7Z465 357 aa17.53■□□□□ 0.4
RAB40C-210ENST00000566290 TSEN2Q8NCE0 465 aaKnown RBP17.53■□□□□ 0.4
RAB40C-210ENST00000566290 SLC35B2Q8TB61 432 aa17.53■□□□□ 0.4
RAB40C-210ENST00000566290 RXFP2Q8WXD0 754 aa17.53■□□□□ 0.4
RAB40C-210ENST00000566290 PABPC5Q96DU9 382 aaKnown RBP17.53■□□□□ 0.4
RAB40C-210ENST00000566290 DDX23Q9BUQ8 820 aaKnown RBP17.53■□□□□ 0.4
RAB40C-210ENST00000566290 NEUROG2Q9H2A3 272 aa17.53■□□□□ 0.4
RAB40C-210ENST00000566290 CHST7Q9NS84 486 aa17.53■□□□□ 0.4
RAB40C-210ENST00000566290 TMEM51Q9NW97 253 aa17.53■□□□□ 0.4
RAB40C-210ENST00000566290 MIOSQ9NXC5 875 aa17.53■□□□□ 0.4
RAB40C-210ENST00000566290 FAM153AQ9UHL3 310 aa17.53■□□□□ 0.4
RAB40C-210ENST00000566290 PATJQ8NI35 1801 aa17.53■□□□□ 0.4
RAB40C-210ENST00000566290 LRRD1A4D1F6 860 aa17.52■□□□□ 0.4
RAB40C-210ENST00000566290 DAB1O75553 588 aa17.52■□□□□ 0.4
RAB40C-210ENST00000566290 SYF2O95926 243 aaKnown RBP17.52■□□□□ 0.4
RAB40C-210ENST00000566290 TCF4P15884 667 aa17.52■□□□□ 0.4
RAB40C-210ENST00000566290 IVDP26440 423 aa17.52■□□□□ 0.4
RAB40C-210ENST00000566290 IL1R2P27930 398 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms