RNA–Protein interactions for RNA: ENST00000566230.5

COMMD4-214, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-214ENST00000566230 SNX25Q9H3E2 840 aa14.21□□□□□ -0.13
COMMD4-214ENST00000566230 CALCOCO1Q9P1Z2 691 aa14.21□□□□□ -0.13
COMMD4-214ENST00000566230 CHORDC1Q9UHD1 332 aaPredicted RBP14.21□□□□□ -0.13
COMMD4-214ENST00000566230 SERTAD1Q9UHV2 236 aa14.21□□□□□ -0.13
COMMD4-214ENST00000566230 PTPRBP23467 1997 aa14.2□□□□□ -0.14
COMMD4-214ENST00000566230 IGHV1OR15-9A0A0B4J2B8 117 aa14.2□□□□□ -0.14
COMMD4-214ENST00000566230 H0Y626 953 aa14.2□□□□□ -0.14
COMMD4-214ENST00000566230 ARHGAP33O14559 1287 aa14.2□□□□□ -0.14
COMMD4-214ENST00000566230 TRIM16O95361 564 aa14.2□□□□□ -0.14
COMMD4-214ENST00000566230 FAM163BP0C2L3 166 aa14.2□□□□□ -0.14
COMMD4-214ENST00000566230 YWHAQP27348 245 aa14.2□□□□□ -0.14
COMMD4-214ENST00000566230 C10orf76Q5T2E6 689 aa14.2□□□□□ -0.14
COMMD4-214ENST00000566230 NUP93Q8N1F7 819 aa14.2□□□□□ -0.14
COMMD4-214ENST00000566230 SCAMP5Q8TAC9 235 aa14.2□□□□□ -0.14
COMMD4-214ENST00000566230 HPS3Q969F9 1004 aa14.2□□□□□ -0.14
COMMD4-214ENST00000566230 PAGE5Q96GU1 130 aa14.2□□□□□ -0.14
COMMD4-214ENST00000566230 CCDC34Q96HJ3 373 aa14.2□□□□□ -0.14
COMMD4-214ENST00000566230 CAMK1GQ96NX5 476 aa14.2□□□□□ -0.14
COMMD4-214ENST00000566230 KCNK16Q96T55 309 aa14.2□□□□□ -0.14
COMMD4-214ENST00000566230 ACOX2Q99424 681 aa14.2□□□□□ -0.14
COMMD4-214ENST00000566230 ELOVL4Q9GZR5 314 aa14.2□□□□□ -0.14
COMMD4-214ENST00000566230 CCSER2Q9H7U1 834 aa14.2□□□□□ -0.14
COMMD4-214ENST00000566230 GDPD2Q9HCC8 539 aa14.2□□□□□ -0.14
COMMD4-214ENST00000566230 SPHK2Q9NRA0 654 aa14.2□□□□□ -0.14
COMMD4-214ENST00000566230 DNAAF2Q9NVR5 837 aaKnown RBP14.2□□□□□ -0.14
COMMD4-214ENST00000566230 HSPBP1Q9NZL4 362 aa14.2□□□□□ -0.14
COMMD4-214ENST00000566230 DEC1Q9P2X7 70 aa14.2□□□□□ -0.14
COMMD4-214ENST00000566230 ACTN4O43707 911 aaKnown RBP14.19□□□□□ -0.14
COMMD4-214ENST00000566230 GJB3O75712 270 aa14.19□□□□□ -0.14
COMMD4-214ENST00000566230 ZNF202O95125 648 aa14.19□□□□□ -0.14
COMMD4-214ENST00000566230 HOXB2P14652 356 aa14.19□□□□□ -0.14
COMMD4-214ENST00000566230 NTSR1P30989 418 aa14.19□□□□□ -0.14
COMMD4-214ENST00000566230 AFMP43652 599 aa14.19□□□□□ -0.14
COMMD4-214ENST00000566230 NDUFA8P51970 172 aa14.19□□□□□ -0.14
COMMD4-214ENST00000566230 ASIC1P78348 528 aa14.19□□□□□ -0.14
COMMD4-214ENST00000566230 ZNF423Q2M1K9 1284 aa14.19□□□□□ -0.14
COMMD4-214ENST00000566230 SNX30Q5VWJ9 437 aa14.19□□□□□ -0.14
COMMD4-214ENST00000566230 BTBD8Q5XKL5 378 aa14.19□□□□□ -0.14
COMMD4-214ENST00000566230 EGFLAMQ63HQ2 1017 aa14.19□□□□□ -0.14
COMMD4-214ENST00000566230 UNC13DQ70J99 1090 aa14.19□□□□□ -0.14
COMMD4-214ENST00000566230 TRMT11Q7Z4G4 463 aaKnown RBP14.19□□□□□ -0.14
COMMD4-214ENST00000566230 PROSER1Q86XN7 944 aa14.19□□□□□ -0.14
COMMD4-214ENST00000566230 TRIML1Q8N9V2 468 aa14.19□□□□□ -0.14
COMMD4-214ENST00000566230 TERB1Q8NA31 727 aa14.19□□□□□ -0.14
COMMD4-214ENST00000566230 PDZD8Q8NEN9 1154 aa14.19□□□□□ -0.14
COMMD4-214ENST00000566230 OVCA2Q8WZ82 227 aa14.19□□□□□ -0.14
COMMD4-214ENST00000566230 FBXO32Q969P5 355 aa14.19□□□□□ -0.14
COMMD4-214ENST00000566230 ERLEC1Q96DZ1 483 aa14.19□□□□□ -0.14
COMMD4-214ENST00000566230 DUSP9Q99956 384 aaKnown RBP14.19□□□□□ -0.14
COMMD4-214ENST00000566230 IL37Q9NZH6 218 aa14.19□□□□□ -0.14
COMMD4-214ENST00000566230 STARD13Q9Y3M8 1113 aa14.19□□□□□ -0.14
COMMD4-214ENST00000566230 SETXQ7Z333 2677 aaKnown RBP14.18□□□□□ -0.14
COMMD4-214ENST00000566230 CABIN1Q9Y6J0 2220 aa14.18□□□□□ -0.14
COMMD4-214ENST00000566230 SH3BP5O60239 455 aa14.18□□□□□ -0.14
COMMD4-214ENST00000566230 RTN3O95197 1032 aaPredicted RBP14.18□□□□□ -0.14
COMMD4-214ENST00000566230 ZDHHC11BP0C7U3 371 aa14.18□□□□□ -0.14
COMMD4-214ENST00000566230 DLATP10515 647 aaKnown RBP14.18□□□□□ -0.14
COMMD4-214ENST00000566230 NDUFV2P19404 249 aa14.18□□□□□ -0.14
COMMD4-214ENST00000566230 RDXP35241 583 aaKnown RBP14.18□□□□□ -0.14
COMMD4-214ENST00000566230 PGFP49763 221 aa14.18□□□□□ -0.14
COMMD4-214ENST00000566230 TRIP6Q15654 476 aaKnown RBP14.18□□□□□ -0.14
COMMD4-214ENST00000566230 ANO4Q32M45 955 aa14.18□□□□□ -0.14
COMMD4-214ENST00000566230 WDR72Q3MJ13 1102 aa14.18□□□□□ -0.14
COMMD4-214ENST00000566230 HECTD3Q5T447 861 aa14.18□□□□□ -0.14
COMMD4-214ENST00000566230 PAQR9Q6ZVX9 377 aa14.18□□□□□ -0.14
COMMD4-214ENST00000566230 RABEPKQ7Z6M1 372 aa14.18□□□□□ -0.14
COMMD4-214ENST00000566230 RDH13Q8NBN7 331 aa14.18□□□□□ -0.14
COMMD4-214ENST00000566230 B3GALNT2Q8NCR0 500 aa14.18□□□□□ -0.14
COMMD4-214ENST00000566230 ZNF507Q8TCN5 953 aa14.18□□□□□ -0.14
COMMD4-214ENST00000566230 IPO4Q8TEX9 1081 aaKnown RBP14.18□□□□□ -0.14
COMMD4-214ENST00000566230 ZNF516Q92618 1163 aa14.18□□□□□ -0.14
COMMD4-214ENST00000566230 HSPA12BQ96MM6 686 aa14.18□□□□□ -0.14
COMMD4-214ENST00000566230 GZF1Q9H116 711 aaPredicted RBP14.18□□□□□ -0.14
COMMD4-214ENST00000566230 CD93Q9NPY3 652 aa14.18□□□□□ -0.14
COMMD4-214ENST00000566230 CYP8B1Q9UNU6 501 aa14.18□□□□□ -0.14
COMMD4-214ENST00000566230 SH3BP1Q9Y3L3 701 aa14.18□□□□□ -0.14
COMMD4-214ENST00000566230 GOLGA4Q13439 2230 aaKnown RBP14.18□□□□□ -0.14
COMMD4-214ENST00000566230 A8MXQ7 604 aa14.17□□□□□ -0.14
COMMD4-214ENST00000566230 TGFB1I1O43294 461 aa14.17□□□□□ -0.14
COMMD4-214ENST00000566230 GREM1O60565 184 aa14.17□□□□□ -0.14
COMMD4-214ENST00000566230 TNNI1P19237 187 aa14.17□□□□□ -0.14
COMMD4-214ENST00000566230 MYL6P60660 151 aa14.17□□□□□ -0.14
COMMD4-214ENST00000566230 TNNC1P63316 161 aa14.17□□□□□ -0.14
COMMD4-214ENST00000566230 EHHADHQ08426 723 aa14.17□□□□□ -0.14
COMMD4-214ENST00000566230 SCAPQ12770 1279 aa14.17□□□□□ -0.14
COMMD4-214ENST00000566230 CUL4BQ13620 913 aa14.17□□□□□ -0.14
COMMD4-214ENST00000566230 HNRNPDQ14103 355 aaKnown RBP14.17□□□□□ -0.14
COMMD4-214ENST00000566230 PSMD6Q15008 389 aa14.17□□□□□ -0.14
COMMD4-214ENST00000566230 SNRNP35Q16560 246 aaKnown RBP14.17□□□□□ -0.14
COMMD4-214ENST00000566230 C19orf48Q6RUI8 117 aa14.17□□□□□ -0.14
COMMD4-214ENST00000566230 KRBA2Q6ZNG9 492 aa14.17□□□□□ -0.14
COMMD4-214ENST00000566230 ZNF419Q96HQ0 510 aaPredicted RBP14.17□□□□□ -0.14
COMMD4-214ENST00000566230 CGRRF1Q99675 332 aa14.17□□□□□ -0.14
COMMD4-214ENST00000566230 XYLT2Q9H1B5 865 aa14.17□□□□□ -0.14
COMMD4-214ENST00000566230 SLC6A17Q9H1V8 727 aa14.17□□□□□ -0.14
COMMD4-214ENST00000566230 BLZF1Q9H2G9 400 aa14.17□□□□□ -0.14
COMMD4-214ENST00000566230 KIAA1586Q9HCI6 787 aa14.17□□□□□ -0.14
COMMD4-214ENST00000566230 GMIPQ9P107 970 aa14.17□□□□□ -0.14
COMMD4-214ENST00000566230 GPSM3Q9Y4H4 160 aa14.17□□□□□ -0.14
COMMD4-214ENST00000566230 ASXL3Q9C0F0 2248 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms