RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 FITM2Q8N6M3 262 aa4.82□□□□□ -1.64
LINC00561-201ENST00000565815 TMEM171Q8WVE6 324 aa4.82□□□□□ -1.64
LINC00561-201ENST00000565815 EXTL1Q92935 676 aa4.82□□□□□ -1.64
LINC00561-201ENST00000565815 EVI5LQ96CN4 794 aa4.82□□□□□ -1.64
LINC00561-201ENST00000565815 CDCA5Q96FF9 252 aa4.82□□□□□ -1.64
LINC00561-201ENST00000565815 FAM167AQ96KS9 214 aa4.82□□□□□ -1.64
LINC00561-201ENST00000565815 SNX22Q96L94 193 aa4.82□□□□□ -1.64
LINC00561-201ENST00000565815 TRIB1Q96RU8 372 aa4.82□□□□□ -1.64
LINC00561-201ENST00000565815 DPH1Q9BZG8 443 aa4.82□□□□□ -1.64
LINC00561-201ENST00000565815 MS4A7Q9GZW8 240 aaPredicted RBP4.82□□□□□ -1.64
LINC00561-201ENST00000565815 GPR35Q9HC97 309 aa4.82□□□□□ -1.64
LINC00561-201ENST00000565815 CNNM1Q9NRU3 951 aa4.82□□□□□ -1.64
LINC00561-201ENST00000565815 ANKRD36CQ5JPF3 1778 aa4.82□□□□□ -1.64
LINC00561-201ENST00000565815 LAMB4A4D0S4 1761 aa4.82□□□□□ -1.64
LINC00561-201ENST00000565815 TNFRSF6BO95407 300 aa4.82□□□□□ -1.64
LINC00561-201ENST00000565815 MT-ND5P03915 603 aa4.82□□□□□ -1.64
LINC00561-201ENST00000565815 FGFR2P21802 821 aa4.82□□□□□ -1.64
LINC00561-201ENST00000565815 GRAPQ13588 217 aa4.82□□□□□ -1.64
LINC00561-201ENST00000565815 PLA1AQ53H76 456 aa4.82□□□□□ -1.64
LINC00561-201ENST00000565815 LCE4AQ5TA78 99 aa4.82□□□□□ -1.64
LINC00561-201ENST00000565815 LIN54Q6MZP7 749 aa4.82□□□□□ -1.64
LINC00561-201ENST00000565815 TSHZ1Q6ZSZ6 1077 aa4.82□□□□□ -1.64
LINC00561-201ENST00000565815 USP49Q70CQ1 688 aa4.82□□□□□ -1.64
LINC00561-201ENST00000565815 ZNF34Q8IZ26 560 aa4.82□□□□□ -1.64
LINC00561-201ENST00000565815 GRAPLQ8TC17 118 aaPredicted RBP4.82□□□□□ -1.64
LINC00561-201ENST00000565815 UTP14AQ9BVJ6 771 aaKnown RBP4.82□□□□□ -1.64
LINC00561-201ENST00000565815 KRTAP3-1Q9BYR8 98 aa4.82□□□□□ -1.64
LINC00561-201ENST00000565815 ZNF700Q9H0M5 742 aa4.82□□□□□ -1.64
LINC00561-201ENST00000565815 NELFAQ9H3P2 528 aa4.82□□□□□ -1.64
LINC00561-201ENST00000565815 ZCCHC17Q9NP64 241 aaKnown RBP4.82□□□□□ -1.64
LINC00561-201ENST00000565815 CFAP97Q9P2B7 532 aa4.82□□□□□ -1.64
LINC00561-201ENST00000565815 ZDHHC8Q9ULC8 765 aa4.82□□□□□ -1.64
LINC00561-201ENST00000565815 MAN2B2Q9Y2E5 1009 aa4.82□□□□□ -1.64
LINC00561-201ENST00000565815 MYO3BQ8WXR4 1341 aa4.82□□□□□ -1.64
LINC00561-201ENST00000565815 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.81□□□□□ -1.64
LINC00561-201ENST00000565815 A0A1B0GTW7 788 aa4.81□□□□□ -1.64
LINC00561-201ENST00000565815 PMS2P1A4D2B8 440 aa4.81□□□□□ -1.64
LINC00561-201ENST00000565815 TBC1D4O60343 1298 aa4.81□□□□□ -1.64
LINC00561-201ENST00000565815 MFAP3LO75121 409 aa4.81□□□□□ -1.64
LINC00561-201ENST00000565815 NTSR1P30989 418 aa4.81□□□□□ -1.64
LINC00561-201ENST00000565815 SPDYAQ5MJ70 313 aa4.81□□□□□ -1.64
LINC00561-201ENST00000565815 IGFL4Q6B9Z1 124 aa4.81□□□□□ -1.64
LINC00561-201ENST00000565815 MAMDC4Q6UXC1 1216 aa4.81□□□□□ -1.64
LINC00561-201ENST00000565815 FTSJ3Q8IY81 847 aaKnown RBP4.81□□□□□ -1.64
LINC00561-201ENST00000565815 Q8NA96 180 aa4.81□□□□□ -1.64
LINC00561-201ENST00000565815 IL17DQ8TAD2 202 aa4.81□□□□□ -1.64
LINC00561-201ENST00000565815 IPO4Q8TEX9 1081 aaKnown RBP4.81□□□□□ -1.64
LINC00561-201ENST00000565815 TMEM125Q96AQ2 219 aa4.81□□□□□ -1.64
LINC00561-201ENST00000565815 LOXL4Q96JB6 756 aa4.81□□□□□ -1.64
LINC00561-201ENST00000565815 BTBD1Q9H0C5 482 aa4.81□□□□□ -1.64
LINC00561-201ENST00000565815 XDHP47989 1333 aa4.81□□□□□ -1.64
LINC00561-201ENST00000565815 LAMB1P07942 1786 aa4.81□□□□□ -1.64
LINC00561-201ENST00000565815 KDM3BQ7LBC6 1761 aa4.81□□□□□ -1.64
LINC00561-201ENST00000565815 PDE4DIPQ5VU43 2346 aa4.81□□□□□ -1.64
LINC00561-201ENST00000565815 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.81□□□□□ -1.64
LINC00561-201ENST00000565815 TOR1BO14657 336 aa4.81□□□□□ -1.64
LINC00561-201ENST00000565815 GCSHP23434 173 aa4.81□□□□□ -1.64
LINC00561-201ENST00000565815 PDIA3P30101 505 aaKnown RBP4.81□□□□□ -1.64
LINC00561-201ENST00000565815 MPEG1Q2M385 716 aa4.81□□□□□ -1.64
LINC00561-201ENST00000565815 CLEC17AQ6ZS10 378 aa4.81□□□□□ -1.64
LINC00561-201ENST00000565815 MAPKAPK5Q8IW41 473 aa4.81□□□□□ -1.64
LINC00561-201ENST00000565815 OR1N1Q8NGS0 311 aa4.81□□□□□ -1.64
LINC00561-201ENST00000565815 KBTBD7Q8WVZ9 684 aa4.81□□□□□ -1.64
LINC00561-201ENST00000565815 ARHGAP45Q92619 1136 aa4.81□□□□□ -1.64
LINC00561-201ENST00000565815 NMD3Q96D46 503 aaKnown RBP4.81□□□□□ -1.64
LINC00561-201ENST00000565815 WDR12Q9GZL7 423 aaKnown RBP4.81□□□□□ -1.64
LINC00561-201ENST00000565815 COL4A5P29400 1685 aa4.81□□□□□ -1.64
LINC00561-201ENST00000565815 FGF18O76093 207 aa4.81□□□□□ -1.64
LINC00561-201ENST00000565815 ARIH2O95376 493 aa4.81□□□□□ -1.64
LINC00561-201ENST00000565815 RHOP08100 348 aa4.81□□□□□ -1.64
LINC00561-201ENST00000565815 ADORA2AP29274 412 aa4.81□□□□□ -1.64
LINC00561-201ENST00000565815 GEN1Q17RS7 908 aa4.81□□□□□ -1.64
LINC00561-201ENST00000565815 GRAMD1BQ3KR37 738 aa4.81□□□□□ -1.64
LINC00561-201ENST00000565815 MFSD5Q6N075 450 aa4.81□□□□□ -1.64
LINC00561-201ENST00000565815 POLNQ7Z5Q5 900 aa4.81□□□□□ -1.64
LINC00561-201ENST00000565815 PDSS2Q86YH6 399 aa4.81□□□□□ -1.64
LINC00561-201ENST00000565815 APOBEC3FQ8IUX4 373 aaKnown RBP4.81□□□□□ -1.64
LINC00561-201ENST00000565815 RHOT2Q8IXI1 618 aa4.81□□□□□ -1.64
LINC00561-201ENST00000565815 IL17REQ8NFR9 667 aa4.81□□□□□ -1.64
LINC00561-201ENST00000565815 ADAM2Q99965 735 aa4.81□□□□□ -1.64
LINC00561-201ENST00000565815 KRTAP4-12Q9BQ66 201 aa4.81□□□□□ -1.64
LINC00561-201ENST00000565815 GNL3LQ9NVN8 582 aaKnown RBP4.81□□□□□ -1.64
LINC00561-201ENST00000565815 BABAM1Q9NWV8 329 aa4.81□□□□□ -1.64
LINC00561-201ENST00000565815 SCAF8Q9UPN6 1271 aaKnown RBP4.81□□□□□ -1.64
LINC00561-201ENST00000565815 TRIM17Q9Y577 477 aa4.81□□□□□ -1.64
LINC00561-201ENST00000565815 COL3A1P02461 1466 aaPredicted RBP4.8□□□□□ -1.64
LINC00561-201ENST00000565815 DUOX1Q9NRD9 1551 aa4.8□□□□□ -1.64
LINC00561-201ENST00000565815 ISM1B1AKI9 464 aa4.8□□□□□ -1.64
LINC00561-201ENST00000565815 TRIM38O00635 465 aa4.8□□□□□ -1.64
LINC00561-201ENST00000565815 NTSR2O95665 410 aa4.8□□□□□ -1.64
LINC00561-201ENST00000565815 CKBP12277 381 aa4.8□□□□□ -1.64
LINC00561-201ENST00000565815 GATA3P23771 443 aa4.8□□□□□ -1.64
LINC00561-201ENST00000565815 DDIT3P35638 169 aa4.8□□□□□ -1.64
LINC00561-201ENST00000565815 CHKAP35790 457 aa4.8□□□□□ -1.64
LINC00561-201ENST00000565815 HSPA7P48741 367 aa4.8□□□□□ -1.64
LINC00561-201ENST00000565815 CARSP49589 748 aaKnown RBP4.8□□□□□ -1.64
LINC00561-201ENST00000565815 TERF1P54274 439 aa4.8□□□□□ -1.64
LINC00561-201ENST00000565815 EIF2B5Q13144 721 aaKnown RBP4.8□□□□□ -1.64
LINC00561-201ENST00000565815 ELF2Q15723 593 aa4.8□□□□□ -1.64
LINC00561-201ENST00000565815 ARL13BQ3SXY8 428 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms