RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 DAAM2Q86T65 1068 aa11.63□□□□□ -0.55
SF3B3-205ENST00000564899 SCUBE3Q8IX30 993 aa11.63□□□□□ -0.55
SF3B3-205ENST00000564899 SYCE1Q8N0S2 351 aa11.63□□□□□ -0.55
SF3B3-205ENST00000564899 JOSD2Q8TAC2 188 aa11.63□□□□□ -0.55
SF3B3-205ENST00000564899 ZNF461Q8TAF7 563 aa11.63□□□□□ -0.55
SF3B3-205ENST00000564899 CLEC4CQ8WTT0 213 aa11.63□□□□□ -0.55
SF3B3-205ENST00000564899 PIWIL1Q96J94 861 aaKnown RBP11.63□□□□□ -0.55
SF3B3-205ENST00000564899 WDR24Q96S15 920 aa11.63□□□□□ -0.55
SF3B3-205ENST00000564899 EMILIN2Q9BXX0 1053 aa11.63□□□□□ -0.55
SF3B3-205ENST00000564899 ULBP1Q9BZM6 244 aa11.63□□□□□ -0.55
SF3B3-205ENST00000564899 NGRNQ9NPE2 291 aaKnown RBP11.63□□□□□ -0.55
SF3B3-205ENST00000564899 CNGB3Q9NQW8 809 aa11.63□□□□□ -0.55
SF3B3-205ENST00000564899 DNAI1Q9UI46 699 aa11.63□□□□□ -0.55
SF3B3-205ENST00000564899 SLC27A5Q9Y2P5 690 aa11.63□□□□□ -0.55
SF3B3-205ENST00000564899 MYO10Q9HD67 2058 aa11.63□□□□□ -0.55
SF3B3-205ENST00000564899 PRR23AA6NEV1 266 aa11.62□□□□□ -0.55
SF3B3-205ENST00000564899 TMEM191CA6NGB0 347 aa11.62□□□□□ -0.55
SF3B3-205ENST00000564899 MYO1FO00160 1098 aa11.62□□□□□ -0.55
SF3B3-205ENST00000564899 FSCN2O14926 492 aa11.62□□□□□ -0.55
SF3B3-205ENST00000564899 SART1O43290 800 aaKnown RBP11.62□□□□□ -0.55
SF3B3-205ENST00000564899 SOAT2O75908 522 aa11.62□□□□□ -0.55
SF3B3-205ENST00000564899 ABLIM3O94929 683 aa11.62□□□□□ -0.55
SF3B3-205ENST00000564899 ADH1AP07327 375 aa11.62□□□□□ -0.55
SF3B3-205ENST00000564899 ATF2P15336 505 aa11.62□□□□□ -0.55
SF3B3-205ENST00000564899 CASQ1P31415 396 aa11.62□□□□□ -0.55
SF3B3-205ENST00000564899 ELF1P32519 619 aa11.62□□□□□ -0.55
SF3B3-205ENST00000564899 TUFMP49411 452 aaKnown RBP11.62□□□□□ -0.55
SF3B3-205ENST00000564899 RPL7AP62424 266 aaKnown RBP11.62□□□□□ -0.55
SF3B3-205ENST00000564899 RPL10AP62906 217 aaKnown RBP11.62□□□□□ -0.55
SF3B3-205ENST00000564899 IFRD2Q12894 506 aaPredicted RBP11.62□□□□□ -0.55
SF3B3-205ENST00000564899 MESDQ14696 234 aa11.62□□□□□ -0.55
SF3B3-205ENST00000564899 DNTTIP2Q5QJE6 756 aaKnown RBP11.62□□□□□ -0.55
SF3B3-205ENST00000564899 SDHAF4Q5VUM1 108 aa11.62□□□□□ -0.55
SF3B3-205ENST00000564899 SLC26A9Q7LBE3 791 aa11.62□□□□□ -0.55
SF3B3-205ENST00000564899 TMEM105Q8N8V8 129 aa11.62□□□□□ -0.55
SF3B3-205ENST00000564899 MRPL43Q8N983 215 aaKnown RBP11.62□□□□□ -0.55
SF3B3-205ENST00000564899 LRRC57Q8N9N7 239 aa11.62□□□□□ -0.55
SF3B3-205ENST00000564899 MICAL1Q8TDZ2 1067 aa11.62□□□□□ -0.55
SF3B3-205ENST00000564899 ZNF592Q92610 1267 aa11.62□□□□□ -0.55
SF3B3-205ENST00000564899 FAM149B1Q96BN6 582 aa11.62□□□□□ -0.55
SF3B3-205ENST00000564899 BTBD6Q96KE9 485 aa11.62□□□□□ -0.55
SF3B3-205ENST00000564899 KLHL5Q96PQ7 755 aa11.62□□□□□ -0.55
SF3B3-205ENST00000564899 TRIM7Q9C029 511 aa11.62□□□□□ -0.55
SF3B3-205ENST00000564899 GOLPH3Q9H4A6 298 aa11.62□□□□□ -0.55
SF3B3-205ENST00000564899 CYP4F11Q9HBI6 524 aa11.62□□□□□ -0.55
SF3B3-205ENST00000564899 HSFX1Q9UBD0 423 aa11.62□□□□□ -0.55
SF3B3-205ENST00000564899 IP6K2Q9UHH9 426 aa11.62□□□□□ -0.55
SF3B3-205ENST00000564899 LCMT1Q9UIC8 334 aa11.62□□□□□ -0.55
SF3B3-205ENST00000564899 IRAK3Q9Y616 596 aa11.62□□□□□ -0.55
SF3B3-205ENST00000564899 C2orf71A6NGG8 1288 aa11.61□□□□□ -0.55
SF3B3-205ENST00000564899 HIDE1A8MVS5 230 aa11.61□□□□□ -0.55
SF3B3-205ENST00000564899 TNFRSF10BO14763 440 aa11.61□□□□□ -0.55
SF3B3-205ENST00000564899 HSF2BPO75031 334 aa11.61□□□□□ -0.55
SF3B3-205ENST00000564899 GRAP2O75791 330 aa11.61□□□□□ -0.55
SF3B3-205ENST00000564899 PROSCO94903 275 aa11.61□□□□□ -0.55
SF3B3-205ENST00000564899 SEC24AO95486 1093 aa11.61□□□□□ -0.55
SF3B3-205ENST00000564899 FTCDO95954 541 aa11.61□□□□□ -0.55
SF3B3-205ENST00000564899 ZBED1O96006 694 aa11.61□□□□□ -0.55
SF3B3-205ENST00000564899 USP17L7P0C7H9 530 aa11.61□□□□□ -0.55
SF3B3-205ENST00000564899 GPD1P21695 349 aa11.61□□□□□ -0.55
SF3B3-205ENST00000564899 PSMA2P25787 234 aa11.61□□□□□ -0.55
SF3B3-205ENST00000564899 KLRC2P26717 231 aa11.61□□□□□ -0.55
SF3B3-205ENST00000564899 RFC1P35251 1148 aaPredicted RBP11.61□□□□□ -0.55
SF3B3-205ENST00000564899 DAOAP59103 153 aa11.61□□□□□ -0.55
SF3B3-205ENST00000564899 RNASE9P60153 205 aaKnown RBP11.61□□□□□ -0.55
SF3B3-205ENST00000564899 TAF5Q15542 800 aa11.61□□□□□ -0.55
SF3B3-205ENST00000564899 EFHC1Q5JVL4 640 aa11.61□□□□□ -0.55
SF3B3-205ENST00000564899 SYCE2Q6PIF2 218 aa11.61□□□□□ -0.55
SF3B3-205ENST00000564899 DENND5BQ6ZUT9 1274 aa11.61□□□□□ -0.55
SF3B3-205ENST00000564899 SLFN11Q7Z7L1 901 aa11.61□□□□□ -0.55
SF3B3-205ENST00000564899 NUP93Q8N1F7 819 aa11.61□□□□□ -0.55
SF3B3-205ENST00000564899 EMC1Q8N766 993 aa11.61□□□□□ -0.55
SF3B3-205ENST00000564899 STKLD1Q8NE28 680 aa11.61□□□□□ -0.55
SF3B3-205ENST00000564899 SCAMP5Q8TAC9 235 aa11.61□□□□□ -0.55
SF3B3-205ENST00000564899 FNIP1Q8TF40 1166 aa11.61□□□□□ -0.55
SF3B3-205ENST00000564899 IRGQQ8WZA9 623 aa11.61□□□□□ -0.55
SF3B3-205ENST00000564899 NDRG1Q92597 394 aaKnown RBP11.61□□□□□ -0.55
SF3B3-205ENST00000564899 SPATA17Q96L03 361 aa11.61□□□□□ -0.55
SF3B3-205ENST00000564899 NAPGQ99747 312 aaPredicted RBP11.61□□□□□ -0.55
SF3B3-205ENST00000564899 S1PR5Q9H228 398 aa11.61□□□□□ -0.55
SF3B3-205ENST00000564899 RRAGDQ9NQL2 400 aaPredicted RBP11.61□□□□□ -0.55
SF3B3-205ENST00000564899 ASNSD1Q9NWL6 643 aa11.61□□□□□ -0.55
SF3B3-205ENST00000564899 TMEM59LQ9UK28 342 aa11.61□□□□□ -0.55
SF3B3-205ENST00000564899 MAFFQ9ULX9 164 aa11.61□□□□□ -0.55
SF3B3-205ENST00000564899 YIPF1Q9Y548 306 aa11.61□□□□□ -0.55
SF3B3-205ENST00000564899 USP3Q9Y6I4 520 aa11.61□□□□□ -0.55
SF3B3-205ENST00000564899 CTAGE9A4FU28 777 aa11.6□□□□□ -0.55
SF3B3-205ENST00000564899 PROB1E7EW31 1015 aa11.6□□□□□ -0.55
SF3B3-205ENST00000564899 PRRG1O14668 218 aa11.6□□□□□ -0.55
SF3B3-205ENST00000564899 TGM5O43548 720 aa11.6□□□□□ -0.55
SF3B3-205ENST00000564899 GALR2O43603 387 aaPredicted RBP11.6□□□□□ -0.55
SF3B3-205ENST00000564899 SPOPO43791 374 aa11.6□□□□□ -0.55
SF3B3-205ENST00000564899 DAB1O75553 588 aa11.6□□□□□ -0.55
SF3B3-205ENST00000564899 RTN3O95197 1032 aaPredicted RBP11.6□□□□□ -0.55
SF3B3-205ENST00000564899 GLI1P08151 1106 aa11.6□□□□□ -0.55
SF3B3-205ENST00000564899 ATF6P18850 670 aa11.6□□□□□ -0.55
SF3B3-205ENST00000564899 COMTP21964 271 aa11.6□□□□□ -0.55
SF3B3-205ENST00000564899 MAN1A1P33908 653 aa11.6□□□□□ -0.55
SF3B3-205ENST00000564899 FLT3P36888 993 aa11.6□□□□□ -0.55
SF3B3-205ENST00000564899 ALDH1A3P47895 512 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms