RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 GFPT1Q06210 699 aaPredicted RBP14.91□□□□□ -0.02
CDR2-204ENST00000564542 GRAMD4Q6IC98 578 aa14.91□□□□□ -0.02
CDR2-204ENST00000564542 KIAA1211LQ6NV74 962 aa14.91□□□□□ -0.02
CDR2-204ENST00000564542 HTR3DQ70Z44 454 aa14.91□□□□□ -0.02
CDR2-204ENST00000564542 ACOT1Q86TX2 421 aa14.91□□□□□ -0.02
CDR2-204ENST00000564542 MIB1Q86YT6 1006 aa14.91□□□□□ -0.02
CDR2-204ENST00000564542 HDDC3Q8N4P3 179 aa14.91□□□□□ -0.02
CDR2-204ENST00000564542 ZMIZ2Q8NF64 920 aa14.91□□□□□ -0.02
CDR2-204ENST00000564542 PARD3BQ8TEW8 1205 aa14.91□□□□□ -0.02
CDR2-204ENST00000564542 ZNF396Q96N95 335 aaPredicted RBP14.91□□□□□ -0.02
CDR2-204ENST00000564542 SMOQ99835 787 aa14.91□□□□□ -0.02
CDR2-204ENST00000564542 SDCBP2Q9H190 292 aa14.91□□□□□ -0.02
CDR2-204ENST00000564542 BLZF1Q9H2G9 400 aa14.91□□□□□ -0.02
CDR2-204ENST00000564542 FBXO44Q9H4M3 255 aa14.91□□□□□ -0.02
CDR2-204ENST00000564542 CAPN10Q9HC96 672 aa14.91□□□□□ -0.02
CDR2-204ENST00000564542 CSNK1G1Q9HCP0 422 aa14.91□□□□□ -0.02
CDR2-204ENST00000564542 SLC39A2Q9NP94 309 aa14.91□□□□□ -0.02
CDR2-204ENST00000564542 TLR8Q9NR97 1041 aaKnown RBP14.91□□□□□ -0.02
CDR2-204ENST00000564542 DNAJC17Q9NVM6 304 aaKnown RBP14.91□□□□□ -0.02
CDR2-204ENST00000564542 MYO18AQ92614 2054 aaKnown RBP14.91□□□□□ -0.02
CDR2-204ENST00000564542 IGHV1OR15-9A0A0B4J2B8 117 aa14.9□□□□□ -0.02
CDR2-204ENST00000564542 PVALEFA0A1B0GWK0 134 aa14.9□□□□□ -0.02
CDR2-204ENST00000564542 NEDD8-MDP1E9PL57 170 aa14.9□□□□□ -0.02
CDR2-204ENST00000564542 TRIM24O15164 1050 aa14.9□□□□□ -0.02
CDR2-204ENST00000564542 POLR2DO15514 142 aaKnown RBP14.9□□□□□ -0.02
CDR2-204ENST00000564542 ZBTB24O43167 697 aaPredicted RBP14.9□□□□□ -0.02
CDR2-204ENST00000564542 HYAL3O43820 417 aaPredicted RBP14.9□□□□□ -0.02
CDR2-204ENST00000564542 GREM1O60565 184 aa14.9□□□□□ -0.02
CDR2-204ENST00000564542 ZNF217O75362 1048 aa14.9□□□□□ -0.02
CDR2-204ENST00000564542 BEST1O76090 585 aa14.9□□□□□ -0.02
CDR2-204ENST00000564542 VNN1O95497 513 aa14.9□□□□□ -0.02
CDR2-204ENST00000564542 C4BPAP04003 597 aaKnown RBP14.9□□□□□ -0.02
CDR2-204ENST00000564542 P4HA1P13674 534 aa14.9□□□□□ -0.02
CDR2-204ENST00000564542 CCDC130P13994 396 aa14.9□□□□□ -0.02
CDR2-204ENST00000564542 CASP1P29466 404 aa14.9□□□□□ -0.02
CDR2-204ENST00000564542 PGFP49763 221 aa14.9□□□□□ -0.02
CDR2-204ENST00000564542 SIM1P81133 766 aaPredicted RBP14.9□□□□□ -0.02
CDR2-204ENST00000564542 ZNF33AQ06730 810 aa14.9□□□□□ -0.02
CDR2-204ENST00000564542 GOLGA8FQ08AF8 430 aa14.9□□□□□ -0.02
CDR2-204ENST00000564542 GOLGA8DPQ0D2H9 430 aa14.9□□□□□ -0.02
CDR2-204ENST00000564542 EGFLAMQ63HQ2 1017 aa14.9□□□□□ -0.02
CDR2-204ENST00000564542 CHPFQ8IZ52 775 aa14.9□□□□□ -0.02
CDR2-204ENST00000564542 SLC2A14Q8TDB8 520 aa14.9□□□□□ -0.02
CDR2-204ENST00000564542 XPO6Q96QU8 1125 aaKnown RBP14.9□□□□□ -0.02
CDR2-204ENST00000564542 GABRG3Q99928 467 aa14.9□□□□□ -0.02
CDR2-204ENST00000564542 GTPBP2Q9BX10 602 aaKnown RBP14.9□□□□□ -0.02
CDR2-204ENST00000564542 BBS2Q9BXC9 721 aa14.9□□□□□ -0.02
CDR2-204ENST00000564542 CD248Q9HCU0 757 aa14.9□□□□□ -0.02
CDR2-204ENST00000564542 CYLDQ9NQC7 956 aa14.9□□□□□ -0.02
CDR2-204ENST00000564542 FSCN3Q9NQT6 498 aa14.9□□□□□ -0.02
CDR2-204ENST00000564542 FOXD4L1Q9NU39 408 aa14.9□□□□□ -0.02
CDR2-204ENST00000564542 MARK1Q9P0L2 795 aa14.9□□□□□ -0.02
CDR2-204ENST00000564542 ADAMTS9Q9P2N4 1935 aa14.9□□□□□ -0.02
CDR2-204ENST00000564542 PKD1L2Q7Z442 2459 aa14.89□□□□□ -0.03
CDR2-204ENST00000564542 SPAARA0A1B0GVQ0 90 aa14.89□□□□□ -0.03
CDR2-204ENST00000564542 OPHN1O60890 802 aa14.89□□□□□ -0.03
CDR2-204ENST00000564542 TYRP14679 529 aa14.89□□□□□ -0.03
CDR2-204ENST00000564542 NDUFV2P19404 249 aa14.89□□□□□ -0.03
CDR2-204ENST00000564542 WASP42768 502 aa14.89□□□□□ -0.03
CDR2-204ENST00000564542 SDE2Q6IQ49 451 aa14.89□□□□□ -0.03
CDR2-204ENST00000564542 UNC93AQ86WB7 457 aa14.89□□□□□ -0.03
CDR2-204ENST00000564542 CRYBG2Q8N1P7 616 aa14.89□□□□□ -0.03
CDR2-204ENST00000564542 MINDY1Q8N5J2 469 aa14.89□□□□□ -0.03
CDR2-204ENST00000564542 DEFB119Q8N690 84 aa14.89□□□□□ -0.03
CDR2-204ENST00000564542 IPO4Q8TEX9 1081 aaKnown RBP14.89□□□□□ -0.03
CDR2-204ENST00000564542 TMEM174Q8WUU8 243 aa14.89□□□□□ -0.03
CDR2-204ENST00000564542 ZCCHC14Q8WYQ9 949 aaKnown RBP14.89□□□□□ -0.03
CDR2-204ENST00000564542 ELMO3Q96BJ8 720 aa14.89□□□□□ -0.03
CDR2-204ENST00000564542 ACOX2Q99424 681 aa14.89□□□□□ -0.03
CDR2-204ENST00000564542 KLF16Q9BXK1 252 aaPredicted RBP14.89□□□□□ -0.03
CDR2-204ENST00000564542 WDR35Q9P2L0 1181 aa14.89□□□□□ -0.03
CDR2-204ENST00000564542 HMGXB4Q9UGU5 601 aa14.89□□□□□ -0.03
CDR2-204ENST00000564542 LSM7Q9UK45 103 aaKnown RBP14.89□□□□□ -0.03
CDR2-204ENST00000564542 MSRB2Q9Y3D2 182 aa14.89□□□□□ -0.03
CDR2-204ENST00000564542 DMXL2Q8TDJ6 3036 aa14.89□□□□□ -0.03
CDR2-204ENST00000564542 ZFYVE26Q68DK2 2539 aa14.89□□□□□ -0.03
CDR2-204ENST00000564542 MYH10P35580 1976 aa14.88□□□□□ -0.03
CDR2-204ENST00000564542 A0A1W2PQD8 194 aa14.88□□□□□ -0.03
CDR2-204ENST00000564542 SRRM3A6NNA2 597 aaPredicted RBP14.88□□□□□ -0.03
CDR2-204ENST00000564542 K7ELQ4 463 aaPredicted RBP14.88□□□□□ -0.03
CDR2-204ENST00000564542 TBX18O95935 607 aa14.88□□□□□ -0.03
CDR2-204ENST00000564542 RPN1P04843 607 aaKnown RBP14.88□□□□□ -0.03
CDR2-204ENST00000564542 ATP5C1P36542 298 aaKnown RBP14.88□□□□□ -0.03
CDR2-204ENST00000564542 NDST1P52848 882 aa14.88□□□□□ -0.03
CDR2-204ENST00000564542 MAP3K7CLP57077 242 aa14.88□□□□□ -0.03
CDR2-204ENST00000564542 ORC1Q13415 861 aa14.88□□□□□ -0.03
CDR2-204ENST00000564542 CUL4BQ13620 913 aa14.88□□□□□ -0.03
CDR2-204ENST00000564542 SGSM1Q2NKQ1 1148 aa14.88□□□□□ -0.03
CDR2-204ENST00000564542 ZACNQ401N2 412 aa14.88□□□□□ -0.03
CDR2-204ENST00000564542 SLC9A9Q8IVB4 645 aa14.88□□□□□ -0.03
CDR2-204ENST00000564542 SLC41A1Q8IVJ1 513 aa14.88□□□□□ -0.03
CDR2-204ENST00000564542 TAF4BQ92750 862 aa14.88□□□□□ -0.03
CDR2-204ENST00000564542 HSPA12BQ96MM6 686 aa14.88□□□□□ -0.03
CDR2-204ENST00000564542 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.88□□□□□ -0.031e-10■■■■■ 243.1
CDR2-204ENST00000564542 FAM49BQ9NUQ9 324 aa14.88□□□□□ -0.03
CDR2-204ENST00000564542 KLK13Q9UKR3 277 aa14.88□□□□□ -0.03
CDR2-204ENST00000564542 CYP8B1Q9UNU6 501 aa14.88□□□□□ -0.03
CDR2-204ENST00000564542 SCML2Q9UQR0 700 aa14.88□□□□□ -0.03
CDR2-204ENST00000564542 CACNA1EQ15878 2313 aa14.87□□□□□ -0.03
CDR2-204ENST00000564542 FREM2Q5SZK8 3169 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms