RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	DEPDC1B	Q8WUY9	529 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	SLC39A3	Q9BRY0	314 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	DNAJB1	P25685	340 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	PRAME	P78395	509 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	TNFAIP2	Q03169	654 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	TNK2	Q07912	1038 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	ODR4	Q5SWX8	454 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	XKRX	Q6PP77	449 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	STOX1	Q6ZVD7	989 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	CNTD1	Q8N815	330 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	NDUFAF1	Q9Y375	327 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	GSAP	A4D1B5	854 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	TRIM13	O60858	407 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	MYB	P10242	640 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	KCNJ1	P48048	391 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	CCT3	P49368	545 aa	Known RBP	4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	KCNQ4	P56696	695 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	PTP4A2	Q12974	167 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	DNAAF5	Q86Y56	855 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	DEFB107A	Q8IZN7	70 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	ATF7	P17544	494 aa	Predicted RBP	4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	FGFR4	P22455	802 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	ACSBG2	Q5FVE4	666 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	RDH13	Q8NBN7	331 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	C19orf60	Q96EN9	201 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	CDC25C	P30307	473 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	CHRND	Q07001	517 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	KIAA0408	Q6ZU52	694 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	CATSPER3	Q86XQ3	398 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	GRAMD2A	Q8IUY3	354 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	UBE2O	Q9C0C9	1292 aa	Known RBP	4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	ZNF696	Q9H7X3	374 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	KLRC3	Q07444	240 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	NFX1	Q12986	1120 aa	Known RBP	4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	NUP85	Q9BW27	656 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	ADAMTS10	Q9H324	1103 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	SNX13	Q9Y5W8	968 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	FRMPD4	Q14CM0	1322 aa		4.38	□□□□□ -1.71
MACF1-231	ENST00000564288	KMO	O15229	486 aa		4.38	□□□□□ -1.71
MACF1-231	ENST00000564288	MMAA	Q8IVH4	418 aa	Known RBP	4.38	□□□□□ -1.71
MACF1-231	ENST00000564288	WNK4	Q96J92	1243 aa		4.38	□□□□□ -1.71
MACF1-231	ENST00000564288	TRNAU1AP	Q9NX07	287 aa	Known RBP	4.38	□□□□□ -1.71
MACF1-231	ENST00000564288	IFNA14	P01570	189 aa		4.38	□□□□□ -1.71
MACF1-231	ENST00000564288	CSTF3	Q12996	717 aa	Known RBP	4.38	□□□□□ -1.71
MACF1-231	ENST00000564288	ZSWIM1	Q9BR11	485 aa		4.38	□□□□□ -1.71
MACF1-231	ENST00000564288	VANGL2	Q9ULK5	521 aa		4.38	□□□□□ -1.71
MACF1-231	ENST00000564288	PEX16	Q9Y5Y5	336 aa		4.38	□□□□□ -1.71
MACF1-231	ENST00000564288	FOXO3	O43524	673 aa		4.38	□□□□□ -1.71
MACF1-231	ENST00000564288	PEPD	P12955	493 aa		4.38	□□□□□ -1.71
MACF1-231	ENST00000564288	RRM2	P31350	389 aa		4.38	□□□□□ -1.71
MACF1-231	ENST00000564288	HIBADH	P31937	336 aa	Known RBP	4.38	□□□□□ -1.71
MACF1-231	ENST00000564288	KRT20	P35900	424 aa		4.38	□□□□□ -1.71
MACF1-231	ENST00000564288	PRKCQ	Q04759	706 aa		4.38	□□□□□ -1.71
MACF1-231	ENST00000564288	ZNF571	Q7Z3V5	609 aa	Predicted RBP	4.38	□□□□□ -1.71
MACF1-231	ENST00000564288	C9orf72	Q96LT7	481 aa		4.38	□□□□□ -1.71
MACF1-231	ENST00000564288	SEMA6B	Q9H3T3	888 aa		4.38	□□□□□ -1.71
MACF1-231	ENST00000564288	CPD	O75976	1380 aa		4.38	□□□□□ -1.71
MACF1-231	ENST00000564288	ITGA4	P13612	1032 aa		4.38	□□□□□ -1.71
MACF1-231	ENST00000564288	SLC1A6	P48664	564 aa		4.38	□□□□□ -1.71
MACF1-231	ENST00000564288	RRP1B	Q14684	758 aa	Known RBP	4.38	□□□□□ -1.71
MACF1-231	ENST00000564288	PRELID2	Q8N945	189 aa		4.38	□□□□□ -1.71
MACF1-231	ENST00000564288	SETD9	Q8NE22	299 aa		4.38	□□□□□ -1.71
MACF1-231	ENST00000564288	GPHN	Q9NQX3	736 aa	Predicted RBP	4.38	□□□□□ -1.71
MACF1-231	ENST00000564288	UBP1	Q9NZI7	540 aa		4.38	□□□□□ -1.71
MACF1-231	ENST00000564288	RAPGEFL1	Q9UHV5	662 aa		4.38	□□□□□ -1.71
MACF1-231	ENST00000564288	NPR3	P17342	541 aa		4.38	□□□□□ -1.71
MACF1-231	ENST00000564288	IRF2BP1	Q8IU81	584 aa		4.38	□□□□□ -1.71
MACF1-231	ENST00000564288	CCDC60	Q8IWA6	550 aa	Predicted RBP	4.38	□□□□□ -1.71
MACF1-231	ENST00000564288	MAGEB10	Q96LZ2	347 aa	Predicted RBP	4.38	□□□□□ -1.71
MACF1-231	ENST00000564288	PDE8A	O60658	829 aa		4.38	□□□□□ -1.71
MACF1-231	ENST00000564288	PDZK1	Q5T2W1	519 aa		4.38	□□□□□ -1.71
MACF1-231	ENST00000564288	TMTC4	Q5T4D3	741 aa		4.38	□□□□□ -1.71
MACF1-231	ENST00000564288	OR7A2P	Q8NGA2	310 aa		4.38	□□□□□ -1.71
MACF1-231	ENST00000564288	GON7	Q9BXV9	100 aa		4.38	□□□□□ -1.71
MACF1-231	ENST00000564288	CELF4	Q9BZC1	486 aa	Known RBP	4.38	□□□□□ -1.71
MACF1-231	ENST00000564288	TLL2	Q9Y6L7	1015 aa		4.38	□□□□□ -1.71
MACF1-231	ENST00000564288	KLF11	O14901	512 aa		4.38	□□□□□ -1.71
MACF1-231	ENST00000564288	SLC22A1	O15245	554 aa		4.38	□□□□□ -1.71
MACF1-231	ENST00000564288	CRHR1	P34998	444 aa		4.38	□□□□□ -1.71
MACF1-231	ENST00000564288	CEMIP	Q8WUJ3	1361 aa		4.38	□□□□□ -1.71
MACF1-231	ENST00000564288	SPTA1	P02549	2419 aa		4.38	□□□□□ -1.71
MACF1-231	ENST00000564288	KIT	P10721	976 aa		4.38	□□□□□ -1.71
MACF1-231	ENST00000564288	ZNF211	Q13398	564 aa	Predicted RBP	4.38	□□□□□ -1.71
MACF1-231	ENST00000564288	POC5	Q8NA72	575 aa		4.38	□□□□□ -1.71
MACF1-231	ENST00000564288	RSAD1	Q9HA92	442 aa		4.38	□□□□□ -1.71
MACF1-231	ENST00000564288	NRBP2	Q9NSY0	501 aa		4.38	□□□□□ -1.71
MACF1-231	ENST00000564288	XPO7	Q9UIA9	1087 aa	Known RBP	4.38	□□□□□ -1.71
MACF1-231	ENST00000564288	SLC7A1	P30825	629 aa		4.38	□□□□□ -1.71
MACF1-231	ENST00000564288	TCEAL1	Q15170	157 aa		4.38	□□□□□ -1.71
MACF1-231	ENST00000564288	IDO2	Q6ZQW0	420 aa		4.38	□□□□□ -1.71
MACF1-231	ENST00000564288	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	4.38	□□□□□ -1.71
MACF1-231	ENST00000564288	CLYBL	Q8N0X4	340 aa		4.38	□□□□□ -1.71
MACF1-231	ENST00000564288	BARHL2	Q9NY43	387 aa		4.38	□□□□□ -1.71
MACF1-231	ENST00000564288	KIAA1257	Q9ULG3	409 aa		4.38	□□□□□ -1.71
MACF1-231	ENST00000564288	ADHFE1	Q8IWW8	467 aa		4.38	□□□□□ -1.71
MACF1-231	ENST00000564288	ELMOD2	Q8IZ81	293 aa		4.38	□□□□□ -1.71
MACF1-231	ENST00000564288	DAGLB	Q8NCG7	672 aa		4.38	□□□□□ -1.71
MACF1-231	ENST00000564288	CPNE5	Q9HCH3	593 aa		4.38	□□□□□ -1.71
MACF1-231	ENST00000564288	CYLD	Q9NQC7	956 aa		4.38	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms