RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 GVINP1Q7Z2Y8 2422 aa10.22□□□□□ -0.77
UBFD1-203ENST00000564106 RIF1Q5UIP0 2472 aaKnown RBP10.22□□□□□ -0.77
UBFD1-203ENST00000564106 WDR27A2RRH5 827 aa10.22□□□□□ -0.77
UBFD1-203ENST00000564106 CARNS1A5YM72 827 aa10.22□□□□□ -0.77
UBFD1-203ENST00000564106 ANHXE9PGG2 379 aa10.22□□□□□ -0.77
UBFD1-203ENST00000564106 GABRDO14764 452 aa10.22□□□□□ -0.77
UBFD1-203ENST00000564106 SPTLC1O15269 473 aa10.22□□□□□ -0.77
UBFD1-203ENST00000564106 TRAPPC3O43617 180 aa10.22□□□□□ -0.77
UBFD1-203ENST00000564106 B3GAT3O94766 335 aa10.22□□□□□ -0.77
UBFD1-203ENST00000564106 SEC24AO95486 1093 aa10.22□□□□□ -0.77
UBFD1-203ENST00000564106 COMTP21964 271 aa10.22□□□□□ -0.77
UBFD1-203ENST00000564106 CXCR5P32302 372 aa10.22□□□□□ -0.77
UBFD1-203ENST00000564106 SCNN1AP37088 669 aa10.22□□□□□ -0.77
UBFD1-203ENST00000564106 RWDD2BP57060 319 aa10.22□□□□□ -0.77
UBFD1-203ENST00000564106 ROR1Q01973 937 aa10.22□□□□□ -0.77
UBFD1-203ENST00000564106 TDGQ13569 410 aa10.22□□□□□ -0.77
UBFD1-203ENST00000564106 MAPRE1Q15691 268 aaKnown RBP10.22□□□□□ -0.77
UBFD1-203ENST00000564106 ERCC6LQ2NKX8 1250 aa10.22□□□□□ -0.77
UBFD1-203ENST00000564106 PTPN20Q4JDL3 420 aa10.22□□□□□ -0.77
UBFD1-203ENST00000564106 GLE1Q53GS7 698 aaKnown RBP10.22□□□□□ -0.77
UBFD1-203ENST00000564106 DENND1BQ6P3S1 775 aa10.22□□□□□ -0.77
UBFD1-203ENST00000564106 DCLRE1AQ6PJP8 1040 aa10.22□□□□□ -0.77
UBFD1-203ENST00000564106 OTOP3Q7RTS5 596 aa10.22□□□□□ -0.77
UBFD1-203ENST00000564106 MTERF4Q7Z6M4 381 aaKnown RBP10.22□□□□□ -0.77
UBFD1-203ENST00000564106 RHOT1Q8IXI2 618 aa10.22□□□□□ -0.77
UBFD1-203ENST00000564106 SIX5Q8N196 739 aa10.22□□□□□ -0.77
UBFD1-203ENST00000564106 SLC44A3Q8N4M1 653 aa10.22□□□□□ -0.77
UBFD1-203ENST00000564106 MMGT1Q8N4V1 131 aa10.22□□□□□ -0.77
UBFD1-203ENST00000564106 NIPA2Q8N8Q9 360 aa10.22□□□□□ -0.77
UBFD1-203ENST00000564106 ANKRD52Q8NB46 1076 aa10.22□□□□□ -0.77
UBFD1-203ENST00000564106 B3GALNT2Q8NCR0 500 aa10.22□□□□□ -0.77
UBFD1-203ENST00000564106 SPATA4Q8NEY3 305 aa10.22□□□□□ -0.77
UBFD1-203ENST00000564106 FLCNQ8NFG4 579 aa10.22□□□□□ -0.77
UBFD1-203ENST00000564106 COG1Q8WTW3 980 aa10.22□□□□□ -0.77
UBFD1-203ENST00000564106 MAIP1Q8WWC4 291 aa10.22□□□□□ -0.77
UBFD1-203ENST00000564106 ING5Q8WYH8 240 aa10.22□□□□□ -0.77
UBFD1-203ENST00000564106 PSMB7Q99436 277 aa10.22□□□□□ -0.77
UBFD1-203ENST00000564106 KCNH6Q9H252 994 aa10.22□□□□□ -0.77
UBFD1-203ENST00000564106 CRISPLD1Q9H336 500 aa10.22□□□□□ -0.77
UBFD1-203ENST00000564106 GOLPH3Q9H4A6 298 aa10.22□□□□□ -0.77
UBFD1-203ENST00000564106 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.22□□□□□ -0.77
UBFD1-203ENST00000564106 ZDHHC7Q9NXF8 308 aa10.22□□□□□ -0.77
UBFD1-203ENST00000564106 DNMT3BQ9UBC3 853 aaKnown RBP10.22□□□□□ -0.77
UBFD1-203ENST00000564106 CDH9Q9ULB4 789 aa10.22□□□□□ -0.77
UBFD1-203ENST00000564106 CA14Q9ULX7 337 aa10.22□□□□□ -0.77
UBFD1-203ENST00000564106 PACSIN2Q9UNF0 486 aaPredicted RBP10.22□□□□□ -0.77
UBFD1-203ENST00000564106 PCDHA3Q9Y5H8 950 aa10.22□□□□□ -0.77
UBFD1-203ENST00000564106 NUMBLQ9Y6R0 609 aa10.22□□□□□ -0.77
UBFD1-203ENST00000564106 SPTBN4Q9H254 2564 aa10.22□□□□□ -0.77
UBFD1-203ENST00000564106 TARSL2A2RTX5 802 aaKnown RBP10.21□□□□□ -0.77
UBFD1-203ENST00000564106 TMEM191CA6NGB0 347 aa10.21□□□□□ -0.77
UBFD1-203ENST00000564106 SHISA7A6NL88 538 aa10.21□□□□□ -0.77
UBFD1-203ENST00000564106 SIGLEC16A6NMB1 481 aa10.21□□□□□ -0.77
UBFD1-203ENST00000564106 TMEM110-MUSTN1A8MSY1 372 aa10.21□□□□□ -0.77
UBFD1-203ENST00000564106 M0QZQ0 153 aa10.21□□□□□ -0.77
UBFD1-203ENST00000564106 ZNF185O15231 689 aa10.21□□□□□ -0.77
UBFD1-203ENST00000564106 DDX3YO15523 660 aaKnown RBP10.21□□□□□ -0.77
UBFD1-203ENST00000564106 GALR2O43603 387 aaPredicted RBP10.21□□□□□ -0.77
UBFD1-203ENST00000564106 CEP104O60308 925 aa10.21□□□□□ -0.77
UBFD1-203ENST00000564106 CYP11A1P05108 521 aa10.21□□□□□ -0.77
UBFD1-203ENST00000564106 OR4Q2P0C623 313 aa10.21□□□□□ -0.77
UBFD1-203ENST00000564106 KRT3P12035 628 aa10.21□□□□□ -0.77
UBFD1-203ENST00000564106 LAMP2P13473 410 aa10.21□□□□□ -0.77
UBFD1-203ENST00000564106 GLULP15104 373 aa10.21□□□□□ -0.77
UBFD1-203ENST00000564106 TYMPP19971 482 aa10.21□□□□□ -0.77
UBFD1-203ENST00000564106 CCR2P41597 374 aa10.21□□□□□ -0.77
UBFD1-203ENST00000564106 DNA2P51530 1060 aa10.21□□□□□ -0.77
UBFD1-203ENST00000564106 PSMC1P62191 440 aaKnown RBP10.21□□□□□ -0.77
UBFD1-203ENST00000564106 ORC1Q13415 861 aa10.21□□□□□ -0.77
UBFD1-203ENST00000564106 RAB33AQ14088 237 aa10.21□□□□□ -0.77
UBFD1-203ENST00000564106 MRPL58Q14197 206 aaKnown RBP10.21□□□□□ -0.77
UBFD1-203ENST00000564106 ELF2Q15723 593 aa10.21□□□□□ -0.77
UBFD1-203ENST00000564106 VARS2Q5ST30 1063 aaKnown RBP10.21□□□□□ -0.77
UBFD1-203ENST00000564106 PPP1R15BQ5SWA1 713 aa10.21□□□□□ -0.77
UBFD1-203ENST00000564106 PPP1R26Q5T8A7 1209 aaPredicted RBP10.21□□□□□ -0.77
UBFD1-203ENST00000564106 LRRC38Q5VT99 294 aa10.21□□□□□ -0.77
UBFD1-203ENST00000564106 ASTLQ6HA08 431 aaPredicted RBP10.21□□□□□ -0.77
UBFD1-203ENST00000564106 ASCL5Q7RTU5 278 aa10.21□□□□□ -0.77
UBFD1-203ENST00000564106 GPR65Q8IYL9 337 aa10.21□□□□□ -0.77
UBFD1-203ENST00000564106 THEM5Q8N1Q8 247 aa10.21□□□□□ -0.77
UBFD1-203ENST00000564106 PLCD3Q8N3E9 789 aa10.21□□□□□ -0.77
UBFD1-203ENST00000564106 WDTC1Q8N5D0 677 aa10.21□□□□□ -0.77
UBFD1-203ENST00000564106 GPR152Q8TDT2 470 aa10.21□□□□□ -0.77
UBFD1-203ENST00000564106 CD101Q93033 1021 aa10.21□□□□□ -0.77
UBFD1-203ENST00000564106 ACSF2Q96CM8 615 aaPredicted RBP10.21□□□□□ -0.77
UBFD1-203ENST00000564106 TCEAL4Q96EI5 215 aa10.21□□□□□ -0.77
UBFD1-203ENST00000564106 MCRS1Q96EZ8 462 aa10.21□□□□□ -0.77
UBFD1-203ENST00000564106 SUSD3Q96L08 255 aa10.21□□□□□ -0.77
UBFD1-203ENST00000564106 MCEEQ96PE7 176 aa10.21□□□□□ -0.77
UBFD1-203ENST00000564106 HNRNPABQ99729 332 aaKnown RBP10.21□□□□□ -0.77
UBFD1-203ENST00000564106 PLA2G2FQ9BZM2 168 aa10.21□□□□□ -0.77
UBFD1-203ENST00000564106 PLEKHA4Q9H4M7 779 aa10.21□□□□□ -0.77
UBFD1-203ENST00000564106 ST7Q9NRC1 585 aa10.21□□□□□ -0.77
UBFD1-203ENST00000564106 FAM49BQ9NUQ9 324 aa10.21□□□□□ -0.77
UBFD1-203ENST00000564106 DDX43Q9NXZ2 648 aaKnown RBP10.21□□□□□ -0.77
UBFD1-203ENST00000564106 STK39Q9UEW8 545 aa10.21□□□□□ -0.77
UBFD1-203ENST00000564106 SSX2IPQ9Y2D8 614 aa10.21□□□□□ -0.77
UBFD1-203ENST00000564106 TIMM13Q9Y5L4 95 aaPredicted RBP10.21□□□□□ -0.77
UBFD1-203ENST00000564106 CACNA1IQ9P0X4 2223 aa10.21□□□□□ -0.78
UBFD1-203ENST00000564106 ZNF292O60281 2723 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms